Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC-0.39□□□□□ -2.47
USH2AO75445 SNORA70.12-201ENST00000516084 153 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 SNORA70.16-201ENST00000516390 95 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 HIGD1AP6-201ENST00000521833 279 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 MIR4300-201ENST00000581016 96 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 AP001981.2-201ENST00000603241 418 ntBASIC-0.39□□□□□ -2.47
USH2AO75445 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 RNU6-270P-201ENST00000364131 105 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.4□□□□□ -2.47
USH2AO75445 AC113347.3-201ENST00000509113 148 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC-0.4□□□□□ -2.47
USH2AO75445 AC127455.1-201ENST00000565496 145 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC-0.4□□□□□ -2.47
USH2AO75445 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 RNU4-83P-201ENST00000410863 133 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 RNU6-57P-201ENST00000411348 103 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC-0.4□□□□□ -2.47
USH2AO75445 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.4□□□□□ -2.47
USH2AO75445 Y_RNA.658-201ENST00000515990 97 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 RNU6-180P-201ENST00000516697 61 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC-0.4□□□□□ -2.47
USH2AO75445 BNIP3P23-201ENST00000599655 511 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.4□□□□□ -2.47
USH2AO75445 5S_rRNA.11-201ENST00000618635 84 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 FER-210ENST00000628534 558 ntTSL 5 BASIC-0.4□□□□□ -2.47
USH2AO75445 RNU6-1123P-201ENST00000362347 106 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 Y_RNA.331-201ENST00000365267 102 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 RNU6-679P-201ENST00000391003 106 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 MIR889-201ENST00000401280 79 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 MTCO1P21-201ENST00000416634 589 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.4□□□□□ -2.47
USH2AO75445 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC-0.4□□□□□ -2.47
USH2AO75445 AC092573.2-201ENST00000434546 243 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.4□□□□□ -2.47
USH2AO75445 MIR4756-201ENST00000577874 78 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 AP001429.1-201ENST00000602568 530 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 AC011458.1-201ENST00000604034 617 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 AL365434.2-201ENST00000607979 234 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 RNU6-1285P-201ENST00000363480 105 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 SNORD115-26-201ENST00000365067 82 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 SNORD83.1-201ENST00000411362 77 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 AC011233.1-201ENST00000422812 283 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.4□□□□□ -2.47
USH2AO75445 AC133104.1-201ENST00000429100 218 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC-0.4□□□□□ -2.47
USH2AO75445 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.4□□□□□ -2.47
USH2AO75445 PTP4A1P4-201ENST00000512479 322 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 RNU6-667P-201ENST00000517186 102 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 MIR548AO-201ENST00000579992 96 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC-0.4□□□□□ -2.47
USH2AO75445 AF038458.1-201ENST00000588406 262 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 AC005562.2-201ENST00000618264 111 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 MTND4P9-201ENST00000507819 1346 ntBASIC-0.4□□□□□ -2.47
USH2AO75445 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC-0.41□□□□□ -2.47
USH2AO75445 RNU6-655P-201ENST00000362858 107 ntBASIC-0.41□□□□□ -2.47
USH2AO75445 SNORD115-33-201ENST00000363723 82 ntBASIC-0.41□□□□□ -2.47
USH2AO75445 RNU6-621P-201ENST00000364752 109 ntBASIC-0.41□□□□□ -2.47
USH2AO75445 SNORD64-201ENST00000386683 67 ntBASIC-0.41□□□□□ -2.47
USH2AO75445 AL034345.1-201ENST00000407768 123 ntBASIC-0.41□□□□□ -2.47
USH2AO75445 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC-0.41□□□□□ -2.47
USH2AO75445 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.41□□□□□ -2.47
USH2AO75445 MIR3921-201ENST00000577308 85 ntBASIC-0.41□□□□□ -2.47
USH2AO75445 VTRNA2-1-201ENST00000602301 127 ntBASIC-0.41□□□□□ -2.47
USH2AO75445 AC064872.1-201ENST00000604823 1072 ntBASIC-0.41□□□□□ -2.47
USH2AO75445 AL049734.2-201ENST00000441066 616 ntBASIC-0.41□□□□□ -2.47
USH2AO75445 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.41□□□□□ -2.47
USH2AO75445 TRBV8-1-201ENST00000481590 279 ntBASIC-0.41□□□□□ -2.47
USH2AO75445 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.41□□□□□ -2.47
USH2AO75445 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC-0.41□□□□□ -2.47
USH2AO75445 AC012213.3-201ENST00000577199 777 ntBASIC-0.41□□□□□ -2.47
USH2AO75445 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 Y_RNA.520-201ENST00000384556 102 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 AL133475.1-201ENST00000404414 305 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 RNA5SP111-201ENST00000411386 101 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 AC068533.2-201ENST00000411872 306 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 MTND2P21-201ENST00000436242 1042 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 ELOCP11-201ENST00000436690 332 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 ELOCP16-201ENST00000444494 332 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 MTND2P4-201ENST00000445034 1004 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 LINC01399-202ENST00000458450 244 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 RNA5SP269-201ENST00000459032 137 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 RNU4-49P-201ENST00000516080 140 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 RNU7-129P-201ENST00000516128 62 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 RNU6-798P-201ENST00000516912 103 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 MTND4LP26-201ENST00000518144 282 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.41□□□□□ -2.48
USH2AO75445 DEFB131E-201ENST00000532329 154 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 DEFB131E-202ENST00000602581 683 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 AC106754.1-201ENST00000562632 1513 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 RNA5SP259-201ENST00000365541 109 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 RNU6-1293P-201ENST00000384077 107 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 MIR513C-201ENST00000401352 84 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 MIR1262-201ENST00000408276 93 ntBASIC-0.41□□□□□ -2.48
USH2AO75445 FCF1P9-201ENST00000412546 282 ntBASIC-0.41□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms