Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CKS1BP2-201ENST00000497342 240 ntBASIC2.25□□□□□ -2.05
ZIC3O60481 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.25□□□□□ -2.05
ZIC3O60481 MIR449C-201ENST00000516047 92 ntBASIC2.25□□□□□ -2.05
ZIC3O60481 RN7SKP49-201ENST00000516675 260 ntBASIC2.25□□□□□ -2.05
ZIC3O60481 RNU2-44P-201ENST00000516795 194 ntBASIC2.25□□□□□ -2.05
ZIC3O60481 AC022616.4-201ENST00000522985 181 ntBASIC2.25□□□□□ -2.05
ZIC3O60481 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.25□□□□□ -2.05
ZIC3O60481 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.25□□□□□ -2.05
ZIC3O60481 AL355297.2-201ENST00000604792 129 ntBASIC2.25□□□□□ -2.05
ZIC3O60481 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.25□□□□□ -2.05
ZIC3O60481 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.25□□□□□ -2.05
ZIC3O60481 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
ZIC3O60481 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.25□□□□□ -2.05
ZIC3O60481 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ZIC3O60481 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
ZIC3O60481 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
ZIC3O60481 Z82195.2-201ENST00000612348 18351 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 RNU4-82P-201ENST00000362443 140 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 RNU5F-3P-201ENST00000363767 117 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 Y_RNA.389-201ENST00000383924 113 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 RNU6-546P-201ENST00000383991 107 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 Y_RNA.455-201ENST00000384230 98 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 Y_RNA.526-201ENST00000384572 110 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 RNU2-32P-201ENST00000411193 191 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 AC009237.7-201ENST00000447357 229 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 AC091179.3-201ENST00000474761 144 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 AC018868.1-201ENST00000491307 315 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 AC010469.2-201ENST00000496412 480 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.24□□□□□ -2.05
ZIC3O60481 RNU6-764P-201ENST00000516396 105 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 RNU6-1098P-201ENST00000516772 96 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 RNU6-826P-201ENST00000516827 104 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 AC109329.2-201ENST00000519658 482 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 AC022616.8-201ENST00000533569 253 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
ZIC3O60481 AC113195.1-201ENST00000579952 141 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
ZIC3O60481 AC124312.5-201ENST00000604451 268 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
ZIC3O60481 AC010999.1-201ENST00000611856 324 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 CTSLP2-204ENST00000629029 392 ntBASIC2.24□□□□□ -2.05
ZIC3O60481 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ZIC3O60481 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
ZIC3O60481 Y_RNA.145-201ENST00000363527 102 ntBASIC2.23□□□□□ -2.05
ZIC3O60481 RNU6-450P-201ENST00000364654 107 ntBASIC2.23□□□□□ -2.05
ZIC3O60481 RNU6-793P-201ENST00000384233 104 ntBASIC2.23□□□□□ -2.05
ZIC3O60481 SNORA51.11-201ENST00000384442 131 ntBASIC2.23□□□□□ -2.05
ZIC3O60481 AL359511.1-201ENST00000402970 211 ntBASIC2.23□□□□□ -2.05
ZIC3O60481 RNU6-101P-201ENST00000410323 104 ntBASIC2.23□□□□□ -2.05
ZIC3O60481 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.23□□□□□ -2.05
ZIC3O60481 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.23□□□□□ -2.05
ZIC3O60481 AC010095.1-201ENST00000443543 144 ntBASIC2.23□□□□□ -2.05
ZIC3O60481 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.23□□□□□ -2.05
ZIC3O60481 RNU6-327P-201ENST00000516270 127 ntBASIC2.23□□□□□ -2.05
ZIC3O60481 RNU6-1012P-201ENST00000516606 109 ntBASIC2.23□□□□□ -2.05
ZIC3O60481 RNU6-344P-201ENST00000516635 111 ntBASIC2.23□□□□□ -2.05
ZIC3O60481 RNU6-965P-201ENST00000516721 96 ntBASIC2.23□□□□□ -2.05
ZIC3O60481 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.23□□□□□ -2.05
ZIC3O60481 MIR5006-201ENST00000583027 110 ntBASIC2.23□□□□□ -2.05
ZIC3O60481 MZT1P2-201ENST00000604387 248 ntBASIC2.23□□□□□ -2.05
ZIC3O60481 AL449363.1-201ENST00000617815 186 ntBASIC2.23□□□□□ -2.05
ZIC3O60481 MIR1248-201ENST00000629190 106 ntBASIC2.23□□□□□ -2.05
ZIC3O60481 U6.92-201ENST00000636464 89 ntBASIC2.23□□□□□ -2.05
ZIC3O60481 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
ZIC3O60481 AC131280.1-202ENST00000624067 4211 ntBASIC2.23□□□□□ -2.05
ZIC3O60481 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
ZIC3O60481 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
ZIC3O60481 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.22□□□□□ -2.05
ZIC3O60481 Y_RNA.179-201ENST00000363844 90 ntBASIC2.22□□□□□ -2.05
ZIC3O60481 RNU6-234P-201ENST00000365229 104 ntBASIC2.22□□□□□ -2.05
ZIC3O60481 MIR561-201ENST00000385216 97 ntBASIC2.22□□□□□ -2.05
ZIC3O60481 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ZIC3O60481 MIR1252-201ENST00000408861 65 ntBASIC2.22□□□□□ -2.05
ZIC3O60481 SNORD12B-201ENST00000410433 91 ntBASIC2.22□□□□□ -2.05
ZIC3O60481 SUMO1P4-201ENST00000429430 302 ntBASIC2.22□□□□□ -2.05
ZIC3O60481 AC007395.1-201ENST00000451333 677 ntBASIC2.22□□□□□ -2.05
ZIC3O60481 U8.20-201ENST00000459445 131 ntBASIC2.22□□□□□ -2.05
ZIC3O60481 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.22□□□□□ -2.05
ZIC3O60481 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.22□□□□□ -2.05
ZIC3O60481 Y_RNA.683-201ENST00000516508 93 ntBASIC2.22□□□□□ -2.05
ZIC3O60481 Y_RNA.715-201ENST00000517082 110 ntBASIC2.22□□□□□ -2.05
ZIC3O60481 AC034114.1-201ENST00000520293 285 ntBASIC2.22□□□□□ -2.05
ZIC3O60481 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.22□□□□□ -2.05
ZIC3O60481 MIR4298-201ENST00000584380 73 ntBASIC2.22□□□□□ -2.05
ZIC3O60481 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.22□□□□□ -2.05
ZIC3O60481 RPS29P30-201ENST00000600975 111 ntBASIC2.22□□□□□ -2.05
ZIC3O60481 PART1_1.1-201ENST00000611761 217 ntBASIC2.22□□□□□ -2.05
ZIC3O60481 IGHVIII-44-202ENST00000636235 289 ntBASIC2.22□□□□□ -2.05
ZIC3O60481 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ZIC3O60481 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ZIC3O60481 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ZIC3O60481 AC135776.4-201ENST00000624300 1904 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 Y_RNA.153-201ENST00000363615 91 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 RNU4-50P-201ENST00000364361 141 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 Y_RNA.380-201ENST00000365663 111 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 SNORA67.2-201ENST00000384300 149 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 Y_RNA.551-201ENST00000384661 102 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 RNU6-1072P-201ENST00000384703 107 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 RNU6-443P-201ENST00000384780 107 ntBASIC2.21□□□□□ -2.06
ZIC3O60481 RNA5SP504-201ENST00000410676 117 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms