Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 Y_RNA.350-201ENST00000365409 98 ntBASIC3□□□□□ -1.93
KDM1AO60341 Y_RNA.498-201ENST00000384460 102 ntBASIC3□□□□□ -1.93
KDM1AO60341 RNU6-102P-201ENST00000384485 104 ntBASIC3□□□□□ -1.93
KDM1AO60341 RNA5SP504-201ENST00000410676 117 ntBASIC3□□□□□ -1.93
KDM1AO60341 RPL23AP83-201ENST00000434984 473 ntBASIC3□□□□□ -1.93
KDM1AO60341 AC090515.1-201ENST00000465295 476 ntBASIC3□□□□□ -1.93
KDM1AO60341 RNU5F-4P-201ENST00000516581 114 ntBASIC3□□□□□ -1.93
KDM1AO60341 RNU7-110P-201ENST00000516891 62 ntBASIC3□□□□□ -1.93
KDM1AO60341 RN7SKP57-201ENST00000517248 293 ntBASIC3□□□□□ -1.93
KDM1AO60341 SCARNA20.6-201ENST00000517251 106 ntBASIC3□□□□□ -1.93
KDM1AO60341 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3□□□□□ -1.93
KDM1AO60341 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3□□□□□ -1.93
KDM1AO60341 UBL5P2-201ENST00000583788 219 ntBASIC3□□□□□ -1.93
KDM1AO60341 MIR3616-201ENST00000584070 92 ntBASIC3□□□□□ -1.93
KDM1AO60341 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3□□□□□ -1.93
KDM1AO60341 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3□□□□□ -1.93
KDM1AO60341 SNORD113-5-201ENST00000607261 78 ntBASIC3□□□□□ -1.93
KDM1AO60341 AC011373.1-201ENST00000607270 237 ntBASIC3□□□□□ -1.93
KDM1AO60341 AP001282.2-201ENST00000616149 309 ntBASIC3□□□□□ -1.93
KDM1AO60341 MIR6733-201ENST00000635723 61 ntBASIC3□□□□□ -1.93
KDM1AO60341 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
KDM1AO60341 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3□□□□□ -1.93
KDM1AO60341 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
KDM1AO60341 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
KDM1AO60341 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
KDM1AO60341 MIR422A-201ENST00000362286 90 ntBASIC2.99□□□□□ -1.93
KDM1AO60341 RNU4-90P-201ENST00000362773 141 ntBASIC2.99□□□□□ -1.93
KDM1AO60341 RNU6-290P-201ENST00000365212 101 ntBASIC2.99□□□□□ -1.93
KDM1AO60341 RNU6-1264P-201ENST00000383891 107 ntBASIC2.99□□□□□ -1.93
KDM1AO60341 RNU6-21P-201ENST00000384710 107 ntBASIC2.99□□□□□ -1.93
KDM1AO60341 MIR491-201ENST00000384877 84 ntBASIC2.99□□□□□ -1.93
KDM1AO60341 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.99□□□□□ -1.93
KDM1AO60341 AL513477.1-202ENST00000417061 214 ntBASIC2.99□□□□□ -1.93
KDM1AO60341 AC022018.1-201ENST00000430685 241 ntBASIC2.99□□□□□ -1.93
KDM1AO60341 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.99□□□□□ -1.93
KDM1AO60341 CYP2C59P-201ENST00000457790 269 ntBASIC2.99□□□□□ -1.93
KDM1AO60341 RPS27AP9-201ENST00000477681 438 ntBASIC2.99□□□□□ -1.93
KDM1AO60341 RPS23P5-201ENST00000495419 428 ntBASIC2.99□□□□□ -1.93
KDM1AO60341 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.99□□□□□ -1.93
KDM1AO60341 RNU6-1098P-201ENST00000516772 96 ntBASIC2.99□□□□□ -1.93
KDM1AO60341 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.99□□□□□ -1.93
KDM1AO60341 MIR4325-201ENST00000583049 90 ntBASIC2.99□□□□□ -1.93
KDM1AO60341 AL162274.2-201ENST00000614406 332 ntBASIC2.99□□□□□ -1.93
KDM1AO60341 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.99□□□□□ -1.93
KDM1AO60341 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.99□□□□□ -1.93
KDM1AO60341 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.99□□□□□ -1.93
KDM1AO60341 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.98□□□□□ -1.93
KDM1AO60341 Y_RNA.14-201ENST00000362415 103 ntBASIC2.98□□□□□ -1.93
KDM1AO60341 RNA5SP387-201ENST00000364226 106 ntBASIC2.98□□□□□ -1.93
KDM1AO60341 SNORD87-201ENST00000364849 89 ntBASIC2.98□□□□□ -1.93
KDM1AO60341 RNU6-1175P-201ENST00000365200 107 ntBASIC2.98□□□□□ -1.93
KDM1AO60341 Y_RNA.447-201ENST00000384184 113 ntBASIC2.98□□□□□ -1.93
KDM1AO60341 Y_RNA.541-201ENST00000384640 113 ntBASIC2.98□□□□□ -1.93
KDM1AO60341 Y_RNA.562-201ENST00000384695 113 ntBASIC2.98□□□□□ -1.93
KDM1AO60341 RNU6-220P-201ENST00000390919 107 ntBASIC2.98□□□□□ -1.93
KDM1AO60341 RNU4-30P-201ENST00000410245 143 ntBASIC2.98□□□□□ -1.93
KDM1AO60341 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.98□□□□□ -1.93
KDM1AO60341 HSPE1P25-201ENST00000455484 251 ntBASIC2.98□□□□□ -1.93
KDM1AO60341 RPL39P38-201ENST00000467018 153 ntBASIC2.98□□□□□ -1.93
KDM1AO60341 CKS1BP2-201ENST00000497342 240 ntBASIC2.98□□□□□ -1.93
KDM1AO60341 SEPT14P8-201ENST00000508026 178 ntBASIC2.98□□□□□ -1.93
KDM1AO60341 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.98□□□□□ -1.93
KDM1AO60341 SDR42E1P4-201ENST00000620894 481 ntBASIC2.98□□□□□ -1.93
KDM1AO60341 AC127459.3-201ENST00000624328 466 ntBASIC2.98□□□□□ -1.93
KDM1AO60341 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
KDM1AO60341 MIR410-201ENST00000362222 80 ntBASIC2.97□□□□□ -1.93
KDM1AO60341 SNORA72.2-201ENST00000365028 127 ntBASIC2.97□□□□□ -1.93
KDM1AO60341 SNORA67.2-201ENST00000384300 149 ntBASIC2.97□□□□□ -1.93
KDM1AO60341 Y_RNA.476-201ENST00000384347 108 ntBASIC2.97□□□□□ -1.93
KDM1AO60341 RNU6-851P-201ENST00000384565 107 ntBASIC2.97□□□□□ -1.93
KDM1AO60341 MIR95-201ENST00000385072 81 ntBASIC2.97□□□□□ -1.93
KDM1AO60341 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
KDM1AO60341 AC139712.2-201ENST00000424302 339 ntBASIC2.97□□□□□ -1.93
KDM1AO60341 AL161788.1-201ENST00000441805 169 ntBASIC2.97□□□□□ -1.93
KDM1AO60341 MIR449C-201ENST00000516047 92 ntBASIC2.97□□□□□ -1.93
KDM1AO60341 AC055872.1-201ENST00000570978 278 ntBASIC2.97□□□□□ -1.93
KDM1AO60341 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.97□□□□□ -1.93
KDM1AO60341 AL356280.1-201ENST00000603614 379 ntBASIC2.97□□□□□ -1.93
KDM1AO60341 MIR3674-201ENST00000636576 68 ntBASIC2.97□□□□□ -1.93
KDM1AO60341 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.97□□□□□ -1.93
KDM1AO60341 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
KDM1AO60341 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
KDM1AO60341 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.96□□□□□ -1.93
KDM1AO60341 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
KDM1AO60341 AL391987.6-201ENST00000305671 199 ntBASIC2.96□□□□□ -1.94
KDM1AO60341 MIR335-201ENST00000362173 94 ntBASIC2.96□□□□□ -1.94
KDM1AO60341 Y_RNA.16-201ENST00000362421 102 ntBASIC2.96□□□□□ -1.94
KDM1AO60341 RNA5SP374-201ENST00000362939 125 ntBASIC2.96□□□□□ -1.94
KDM1AO60341 Y_RNA.237-201ENST00000364439 102 ntBASIC2.96□□□□□ -1.94
KDM1AO60341 Y_RNA.286-201ENST00000364813 102 ntBASIC2.96□□□□□ -1.94
KDM1AO60341 RNU6-1180P-201ENST00000364935 107 ntBASIC2.96□□□□□ -1.94
KDM1AO60341 RNU6-234P-201ENST00000365229 104 ntBASIC2.96□□□□□ -1.94
KDM1AO60341 RNA5SP240-201ENST00000365355 128 ntBASIC2.96□□□□□ -1.94
KDM1AO60341 RNU6-1310P-201ENST00000384153 107 ntBASIC2.96□□□□□ -1.94
KDM1AO60341 Y_RNA.489-201ENST00000384410 101 ntBASIC2.96□□□□□ -1.94
KDM1AO60341 MIR483-201ENST00000385070 76 ntBASIC2.96□□□□□ -1.94
KDM1AO60341 RNU2-63P-201ENST00000410792 194 ntBASIC2.96□□□□□ -1.94
KDM1AO60341 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.96□□□□□ -1.94
KDM1AO60341 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.96□□□□□ -1.94
KDM1AO60341 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms