Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 RNA5SP425-201ENST00000410336 112 ntBASIC2.56□□□□□ -2
SLC28A2O43868 RNU2-49P-201ENST00000410666 184 ntBASIC2.56□□□□□ -2
SLC28A2O43868 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.56□□□□□ -2
SLC28A2O43868 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.56□□□□□ -2
SLC28A2O43868 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.56□□□□□ -2
SLC28A2O43868 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.56□□□□□ -2
SLC28A2O43868 AC096725.1-201ENST00000514266 313 ntBASIC2.56□□□□□ -2
SLC28A2O43868 RNU6-1338P-201ENST00000516328 91 ntBASIC2.56□□□□□ -2
SLC28A2O43868 SNORD19.2-201ENST00000516978 73 ntBASIC2.56□□□□□ -2
SLC28A2O43868 AC022868.1-201ENST00000517767 391 ntBASIC2.56□□□□□ -2
SLC28A2O43868 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SLC28A2O43868 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.56□□□□□ -2
SLC28A2O43868 MIR4648-201ENST00000580107 72 ntBASIC2.56□□□□□ -2
SLC28A2O43868 AC009779.6-201ENST00000603972 165 ntBASIC2.56□□□□□ -2
SLC28A2O43868 AC091152.3-201ENST00000604227 325 ntBASIC2.56□□□□□ -2
SLC28A2O43868 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
SLC28A2O43868 AC011476.5-201ENST00000615594 130 ntBASIC2.56□□□□□ -2
SLC28A2O43868 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
SLC28A2O43868 ADAM3A-203ENST00000461344 2157 ntBASIC2.56□□□□□ -2
SLC28A2O43868 AC010889.1-201ENST00000566193 2666 ntBASIC2.55□□□□□ -2
SLC28A2O43868 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.55□□□□□ -2
SLC28A2O43868 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.55□□□□□ -2
SLC28A2O43868 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.55□□□□□ -2
SLC28A2O43868 SNORD32A-201ENST00000364805 84 ntBASIC2.55□□□□□ -2
SLC28A2O43868 RNU6-318P-201ENST00000384283 103 ntBASIC2.55□□□□□ -2
SLC28A2O43868 SNORD116-20-201ENST00000384529 92 ntBASIC2.55□□□□□ -2
SLC28A2O43868 Y_RNA.541-201ENST00000384640 113 ntBASIC2.55□□□□□ -2
SLC28A2O43868 RNA5SP213-201ENST00000391031 106 ntBASIC2.55□□□□□ -2
SLC28A2O43868 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.55□□□□□ -2
SLC28A2O43868 AC096649.2-201ENST00000416186 393 ntBASIC2.55□□□□□ -2
SLC28A2O43868 EIF1P2-201ENST00000428233 350 ntBASIC2.55□□□□□ -2
SLC28A2O43868 AL591043.1-201ENST00000432461 424 ntBASIC2.55□□□□□ -2
SLC28A2O43868 AL161651.1-201ENST00000440882 223 ntBASIC2.55□□□□□ -2
SLC28A2O43868 AC124916.1-201ENST00000444020 547 ntBASIC2.55□□□□□ -2
SLC28A2O43868 AC016700.2-201ENST00000446011 156 ntBASIC2.55□□□□□ -2
SLC28A2O43868 AL353705.4-201ENST00000449661 238 ntBASIC2.55□□□□□ -2
SLC28A2O43868 AL139109.1-201ENST00000455491 297 ntBASIC2.55□□□□□ -2
SLC28A2O43868 AC006026.2-201ENST00000457376 180 ntBASIC2.55□□□□□ -2
SLC28A2O43868 AF186996.7-201ENST00000492781 209 ntBASIC2.55□□□□□ -2
SLC28A2O43868 RNU5B-3P-201ENST00000516601 115 ntBASIC2.55□□□□□ -2
SLC28A2O43868 MIR4659A-201ENST00000580269 81 ntBASIC2.55□□□□□ -2
SLC28A2O43868 Y_RNA.772-201ENST00000606692 102 ntBASIC2.55□□□□□ -2
SLC28A2O43868 AL353997.5-201ENST00000618886 171 ntBASIC2.55□□□□□ -2
SLC28A2O43868 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.55□□□□□ -2
SLC28A2O43868 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.55□□□□□ -2
SLC28A2O43868 AC026241.1-201ENST00000517873 2142 ntBASIC2.54□□□□□ -2
SLC28A2O43868 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
SLC28A2O43868 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.54□□□□□ -2
SLC28A2O43868 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.54□□□□□ -2
SLC28A2O43868 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.54□□□□□ -2
SLC28A2O43868 Y_RNA.65-201ENST00000362846 100 ntBASIC2.54□□□□□ -2
SLC28A2O43868 SNORD115-32-201ENST00000364079 82 ntBASIC2.54□□□□□ -2
SLC28A2O43868 Y_RNA.277-201ENST00000364754 102 ntBASIC2.54□□□□□ -2
SLC28A2O43868 RNU6-1180P-201ENST00000364935 107 ntBASIC2.54□□□□□ -2
SLC28A2O43868 Y_RNA.352-201ENST00000365439 102 ntBASIC2.54□□□□□ -2
SLC28A2O43868 SNORA29-201ENST00000384183 140 ntBASIC2.54□□□□□ -2
SLC28A2O43868 Y_RNA.462-201ENST00000384268 102 ntBASIC2.54□□□□□ -2
SLC28A2O43868 RNU6-937P-201ENST00000384325 106 ntBASIC2.54□□□□□ -2
SLC28A2O43868 MIR32-201ENST00000384965 70 ntBASIC2.54□□□□□ -2
SLC28A2O43868 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.54□□□□□ -2
SLC28A2O43868 Y_RNA.581-201ENST00000391017 97 ntBASIC2.54□□□□□ -2
SLC28A2O43868 SNORD78.2-201ENST00000391076 69 ntBASIC2.54□□□□□ -2
SLC28A2O43868 FTH1P15-201ENST00000406984 280 ntBASIC2.54□□□□□ -2
SLC28A2O43868 AL135786.1-201ENST00000415892 214 ntBASIC2.54□□□□□ -2
SLC28A2O43868 AC074117.2-201ENST00000417130 397 ntBASIC2.54□□□□□ -2
SLC28A2O43868 AC007969.2-201ENST00000441891 191 ntBASIC2.54□□□□□ -2
SLC28A2O43868 AP000705.1-201ENST00000454567 350 ntBASIC2.54□□□□□ -2
SLC28A2O43868 AP000870.1-201ENST00000472927 406 ntBASIC2.54□□□□□ -2
SLC28A2O43868 RPL31P41-201ENST00000477967 372 ntBASIC2.54□□□□□ -2
SLC28A2O43868 AC090525.1-201ENST00000479116 478 ntBASIC2.54□□□□□ -2
SLC28A2O43868 RPS23P5-201ENST00000495419 428 ntBASIC2.54□□□□□ -2
SLC28A2O43868 SNORA31.6-201ENST00000516241 130 ntBASIC2.54□□□□□ -2
SLC28A2O43868 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.54□□□□□ -2
SLC28A2O43868 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.54□□□□□ -2
SLC28A2O43868 CR383656.8-201ENST00000549046 145 ntBASIC2.54□□□□□ -2
SLC28A2O43868 AC130289.1-201ENST00000577321 73 ntBASIC2.54□□□□□ -2
SLC28A2O43868 AL391813.1-201ENST00000603098 260 ntBASIC2.54□□□□□ -2
SLC28A2O43868 AC098479.1-201ENST00000609225 154 ntBASIC2.54□□□□□ -2
SLC28A2O43868 RMST_6.1-201ENST00000611980 203 ntBASIC2.54□□□□□ -2
SLC28A2O43868 SNORA43.4-201ENST00000629559 138 ntBASIC2.54□□□□□ -2
SLC28A2O43868 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SLC28A2O43868 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SLC28A2O43868 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.53□□□□□ -2
SLC28A2O43868 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.53□□□□□ -2
SLC28A2O43868 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SLC28A2O43868 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
SLC28A2O43868 SNORD56.1-201ENST00000362913 68 ntBASIC2.53□□□□□ -2
SLC28A2O43868 SNORD81.1-201ENST00000363064 77 ntBASIC2.53□□□□□ -2
SLC28A2O43868 Y_RNA.117-201ENST00000363294 101 ntBASIC2.53□□□□□ -2
SLC28A2O43868 SNORD113-8-201ENST00000363497 74 ntBASIC2.53□□□□□ -2
SLC28A2O43868 RNY1-201ENST00000364228 113 ntBASIC2.53□□□□□ -2
SLC28A2O43868 RNU1-112P-201ENST00000364401 164 ntBASIC2.53□□□□□ -2
SLC28A2O43868 RNU6-1280P-201ENST00000365211 107 ntBASIC2.53□□□□□ -2
SLC28A2O43868 RNU6-1062P-201ENST00000383908 107 ntBASIC2.53□□□□□ -2
SLC28A2O43868 Y_RNA.785-201ENST00000384290 109 ntBASIC2.53□□□□□ -2
SLC28A2O43868 Y_RNA.602-201ENST00000410535 92 ntBASIC2.53□□□□□ -2
SLC28A2O43868 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.53□□□□□ -2
SLC28A2O43868 EIF1AXP1-201ENST00000419267 435 ntBASIC2.53□□□□□ -2
SLC28A2O43868 RPL23AP95-201ENST00000426806 265 ntBASIC2.53□□□□□ -2
SLC28A2O43868 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms