Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RNU6-280P-201ENST00000364145 104 ntBASIC2.41□□□□□ -2.02
LDB2O43679 RNU6-879P-201ENST00000364328 108 ntBASIC2.41□□□□□ -2.02
LDB2O43679 Y_RNA.276-201ENST00000364732 109 ntBASIC2.41□□□□□ -2.02
LDB2O43679 MIR29B2-201ENST00000385055 81 ntBASIC2.41□□□□□ -2.02
LDB2O43679 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.41□□□□□ -2.02
LDB2O43679 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.41□□□□□ -2.02
LDB2O43679 RPL30P4-201ENST00000429309 333 ntBASIC2.41□□□□□ -2.02
LDB2O43679 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.41□□□□□ -2.02
LDB2O43679 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.41□□□□□ -2.02
LDB2O43679 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.41□□□□□ -2.02
LDB2O43679 AC104389.3-201ENST00000445629 235 ntBASIC2.41□□□□□ -2.02
LDB2O43679 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.41□□□□□ -2.02
LDB2O43679 AC073901.1-201ENST00000462471 408 ntBASIC2.41□□□□□ -2.02
LDB2O43679 SCARNA3-201ENST00000517097 143 ntBASIC2.41□□□□□ -2.02
LDB2O43679 AC109329.2-201ENST00000519658 482 ntBASIC2.41□□□□□ -2.02
LDB2O43679 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.41□□□□□ -2.02
LDB2O43679 EIF4A1P12-201ENST00000551910 141 ntBASIC2.41□□□□□ -2.02
LDB2O43679 AC091544.4-201ENST00000555268 342 ntBASIC2.41□□□□□ -2.02
LDB2O43679 AC008269.2-201ENST00000561915 1105 ntBASIC2.41□□□□□ -2.02
LDB2O43679 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.41□□□□□ -2.02
LDB2O43679 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.41□□□□□ -2.02
LDB2O43679 AC125232.2-201ENST00000592457 143 ntBASIC2.41□□□□□ -2.02
LDB2O43679 AL121655.1-201ENST00000605811 308 ntBASIC2.41□□□□□ -2.02
LDB2O43679 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.41□□□□□ -2.02
LDB2O43679 MIR1291-201ENST00000627649 87 ntBASIC2.41□□□□□ -2.02
LDB2O43679 U6.92-201ENST00000636464 89 ntBASIC2.41□□□□□ -2.02
LDB2O43679 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LDB2O43679 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
LDB2O43679 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
LDB2O43679 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
LDB2O43679 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
LDB2O43679 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.4□□□□□ -2.02
LDB2O43679 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
LDB2O43679 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
LDB2O43679 RNU1-72P-201ENST00000362976 153 ntBASIC2.4□□□□□ -2.03
LDB2O43679 Y_RNA.144-201ENST00000363521 113 ntBASIC2.4□□□□□ -2.03
LDB2O43679 Y_RNA.149-201ENST00000363558 117 ntBASIC2.4□□□□□ -2.03
LDB2O43679 Y_RNA.210-201ENST00000364161 110 ntBASIC2.4□□□□□ -2.03
LDB2O43679 RNU6-281P-201ENST00000384212 103 ntBASIC2.4□□□□□ -2.03
LDB2O43679 RNU6-318P-201ENST00000384283 103 ntBASIC2.4□□□□□ -2.03
LDB2O43679 Y_RNA.471-201ENST00000384312 102 ntBASIC2.4□□□□□ -2.03
LDB2O43679 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
LDB2O43679 SNORA46.1-201ENST00000391069 153 ntBASIC2.4□□□□□ -2.03
LDB2O43679 SNORD78.2-201ENST00000391076 69 ntBASIC2.4□□□□□ -2.03
LDB2O43679 MIR320B2-201ENST00000408479 138 ntBASIC2.4□□□□□ -2.03
LDB2O43679 U6atac.2-201ENST00000408644 118 ntBASIC2.4□□□□□ -2.03
LDB2O43679 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.4□□□□□ -2.03
LDB2O43679 OOSP1P1-201ENST00000423265 274 ntBASIC2.4□□□□□ -2.03
LDB2O43679 MTCYBP9-201ENST00000431021 303 ntBASIC2.4□□□□□ -2.03
LDB2O43679 RPEP5-201ENST00000441137 268 ntBASIC2.4□□□□□ -2.03
LDB2O43679 FCF1P4-201ENST00000448326 183 ntBASIC2.4□□□□□ -2.03
LDB2O43679 AC010469.2-201ENST00000496412 480 ntBASIC2.4□□□□□ -2.03
LDB2O43679 MTCO2P24-201ENST00000515611 426 ntBASIC2.4□□□□□ -2.03
LDB2O43679 RNU6-635P-201ENST00000516651 102 ntBASIC2.4□□□□□ -2.03
LDB2O43679 RN7SKP49-201ENST00000516675 260 ntBASIC2.4□□□□□ -2.03
LDB2O43679 COX6CP5-201ENST00000527162 228 ntBASIC2.4□□□□□ -2.03
LDB2O43679 AC093023.1-201ENST00000547375 507 ntBASIC2.4□□□□□ -2.03
LDB2O43679 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.4□□□□□ -2.03
LDB2O43679 AC026470.2-201ENST00000561492 181 ntBASIC2.4□□□□□ -2.03
LDB2O43679 AC105245.1-201ENST00000581934 244 ntBASIC2.4□□□□□ -2.03
LDB2O43679 MIR3199-1-201ENST00000582434 88 ntBASIC2.4□□□□□ -2.03
LDB2O43679 AC103810.6-201ENST00000606708 136 ntBASIC2.4□□□□□ -2.03
LDB2O43679 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
LDB2O43679 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
LDB2O43679 ZNF204P-201ENST00000416749 2397 ntBASIC2.4□□□□□ -2.03
LDB2O43679 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.4□□□□□ -2.03
LDB2O43679 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
LDB2O43679 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
LDB2O43679 AC080128.1-201ENST00000474389 1917 ntBASIC2.39□□□□□ -2.03
LDB2O43679 Y_RNA.176-201ENST00000363815 109 ntBASIC2.39□□□□□ -2.03
LDB2O43679 RNU6-873P-201ENST00000363833 107 ntBASIC2.39□□□□□ -2.03
LDB2O43679 RNU6-245P-201ENST00000384020 107 ntBASIC2.39□□□□□ -2.03
LDB2O43679 AL445305.1-201ENST00000432577 575 ntBASIC2.39□□□□□ -2.03
LDB2O43679 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.39□□□□□ -2.03
LDB2O43679 AC140059.1-201ENST00000489238 361 ntBASIC2.39□□□□□ -2.03
LDB2O43679 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.39□□□□□ -2.03
LDB2O43679 AC026436.1-201ENST00000510537 270 ntBASIC2.39□□□□□ -2.03
LDB2O43679 RNU6-1012P-201ENST00000516606 109 ntBASIC2.39□□□□□ -2.03
LDB2O43679 AC090517.1-201ENST00000569307 266 ntBASIC2.39□□□□□ -2.03
LDB2O43679 AC090616.3-201ENST00000582184 217 ntBASIC2.39□□□□□ -2.03
LDB2O43679 SNRPGP20-201ENST00000604477 205 ntBASIC2.39□□□□□ -2.03
LDB2O43679 RAC1P9-201ENST00000604990 392 ntBASIC2.39□□□□□ -2.03
LDB2O43679 AC010205.1-201ENST00000616668 449 ntBASIC2.39□□□□□ -2.03
LDB2O43679 RNA5SP361-201ENST00000362686 118 ntBASIC2.38□□□□□ -2.03
LDB2O43679 RNU6-461P-201ENST00000364195 107 ntBASIC2.38□□□□□ -2.03
LDB2O43679 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
LDB2O43679 RNU6-463P-201ENST00000384340 107 ntBASIC2.38□□□□□ -2.03
LDB2O43679 Y_RNA.574-201ENST00000384766 95 ntBASIC2.38□□□□□ -2.03
LDB2O43679 MIR218-1-201ENST00000384999 110 ntBASIC2.38□□□□□ -2.03
LDB2O43679 RNU6-1109P-201ENST00000391187 107 ntBASIC2.38□□□□□ -2.03
LDB2O43679 RNA5SP181-201ENST00000410246 98 ntBASIC2.38□□□□□ -2.03
LDB2O43679 RN7SKP284-201ENST00000411002 343 ntBASIC2.38□□□□□ -2.03
LDB2O43679 RNU6-1001P-201ENST00000411265 100 ntBASIC2.38□□□□□ -2.03
LDB2O43679 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.38□□□□□ -2.03
LDB2O43679 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
LDB2O43679 AC080013.2-201ENST00000460866 323 ntBASIC2.38□□□□□ -2.03
LDB2O43679 AC067942.3-201ENST00000512025 362 ntBASIC2.38□□□□□ -2.03
LDB2O43679 Y_RNA.713-201ENST00000517013 96 ntBASIC2.38□□□□□ -2.03
LDB2O43679 SNORD53-201ENST00000579969 78 ntBASIC2.38□□□□□ -2.03
LDB2O43679 AC069294.1-201ENST00000608397 350 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms