Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AC021269.2-201ENST00000532318 330 ntBASIC2.13□□□□□ -2.07
SMAD9O15198 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.13□□□□□ -2.07
SMAD9O15198 UBL5P4-201ENST00000562584 236 ntBASIC2.13□□□□□ -2.07
SMAD9O15198 AC067747.1-201ENST00000608026 250 ntBASIC2.13□□□□□ -2.07
SMAD9O15198 MIR1244-1-201ENST00000612829 85 ntBASIC2.13□□□□□ -2.07
SMAD9O15198 MIR1244-3-201ENST00000635744 85 ntBASIC2.13□□□□□ -2.07
SMAD9O15198 MIR1244-2-201ENST00000636449 85 ntBASIC2.13□□□□□ -2.07
SMAD9O15198 MIR1244-4-202ENST00000636813 85 ntBASIC2.13□□□□□ -2.07
SMAD9O15198 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
SMAD9O15198 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.12□□□□□ -2.07
SMAD9O15198 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
SMAD9O15198 RNU6-222P-201ENST00000362438 107 ntBASIC2.12□□□□□ -2.07
SMAD9O15198 RNU6-873P-201ENST00000363833 107 ntBASIC2.12□□□□□ -2.07
SMAD9O15198 SNORD114-30-201ENST00000364448 72 ntBASIC2.12□□□□□ -2.07
SMAD9O15198 SNORD31B-201ENST00000364977 69 ntBASIC2.12□□□□□ -2.07
SMAD9O15198 SNORD14D-201ENST00000384390 87 ntBASIC2.12□□□□□ -2.07
SMAD9O15198 SNORA80E-201ENST00000384744 137 ntBASIC2.12□□□□□ -2.07
SMAD9O15198 RNU6-159P-201ENST00000391080 106 ntBASIC2.12□□□□□ -2.07
SMAD9O15198 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.12□□□□□ -2.07
SMAD9O15198 AC009237.7-201ENST00000447357 229 ntBASIC2.12□□□□□ -2.07
SMAD9O15198 AC008549.1-201ENST00000512900 643 ntBASIC2.12□□□□□ -2.07
SMAD9O15198 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.12□□□□□ -2.07
SMAD9O15198 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.12□□□□□ -2.07
SMAD9O15198 MIR5695-201ENST00000579717 85 ntBASIC2.12□□□□□ -2.07
SMAD9O15198 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.12□□□□□ -2.07
SMAD9O15198 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.12□□□□□ -2.07
SMAD9O15198 AC046143.2-201ENST00000609789 160 ntBASIC2.12□□□□□ -2.07
SMAD9O15198 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.12□□□□□ -2.07
SMAD9O15198 AC104985.2-201ENST00000620598 500 ntBASIC2.12□□□□□ -2.07
SMAD9O15198 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.12□□□□□ -2.07
SMAD9O15198 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.12□□□□□ -2.07
SMAD9O15198 MTND5P10-201ENST00000603719 1809 ntBASIC2.12□□□□□ -2.07
SMAD9O15198 AC007336.1-201ENST00000576365 3828 ntBASIC2.12□□□□□ -2.07
SMAD9O15198 MTND5P16-201ENST00000460269 1703 ntBASIC2.11□□□□□ -2.07
SMAD9O15198 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.11□□□□□ -2.07
SMAD9O15198 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.11□□□□□ -2.07
SMAD9O15198 RNU6-545P-201ENST00000362681 104 ntBASIC2.11□□□□□ -2.07
SMAD9O15198 Y_RNA.146-201ENST00000363549 102 ntBASIC2.11□□□□□ -2.07
SMAD9O15198 Y_RNA.187-201ENST00000363918 113 ntBASIC2.11□□□□□ -2.07
SMAD9O15198 RNU6-280P-201ENST00000364145 104 ntBASIC2.11□□□□□ -2.07
SMAD9O15198 Y_RNA.364-201ENST00000365532 101 ntBASIC2.11□□□□□ -2.07
SMAD9O15198 RNU6-245P-201ENST00000384020 107 ntBASIC2.11□□□□□ -2.07
SMAD9O15198 Y_RNA.577-201ENST00000384794 101 ntBASIC2.11□□□□□ -2.07
SMAD9O15198 MIR504-201ENST00000385065 83 ntBASIC2.11□□□□□ -2.07
SMAD9O15198 HMGN2P39-201ENST00000398005 273 ntBASIC2.11□□□□□ -2.07
SMAD9O15198 AC004866.1-201ENST00000411748 78 ntBASIC2.11□□□□□ -2.07
SMAD9O15198 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.11□□□□□ -2.07
SMAD9O15198 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.11□□□□□ -2.07
SMAD9O15198 MIR2053-201ENST00000459295 91 ntBASIC2.11□□□□□ -2.07
SMAD9O15198 RNU6-1114P-201ENST00000516022 107 ntBASIC2.11□□□□□ -2.07
SMAD9O15198 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.11□□□□□ -2.07
SMAD9O15198 SUB1P3-201ENST00000564581 315 ntBASIC2.11□□□□□ -2.07
SMAD9O15198 C8orf59P2-201ENST00000603441 271 ntBASIC2.11□□□□□ -2.07
SMAD9O15198 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.11□□□□□ -2.07
SMAD9O15198 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
SMAD9O15198 ZNF658B-202ENST00000615961 3375 ntBASIC2.1□□□□□ -2.07
SMAD9O15198 MIR21-201ENST00000362134 72 ntBASIC2.1□□□□□ -2.07
SMAD9O15198 RNU6-874P-201ENST00000362390 105 ntBASIC2.1□□□□□ -2.07
SMAD9O15198 RNU5F-3P-201ENST00000363767 117 ntBASIC2.1□□□□□ -2.07
SMAD9O15198 RNU6-1040P-201ENST00000383974 107 ntBASIC2.1□□□□□ -2.07
SMAD9O15198 MIR10B-201ENST00000385011 110 ntBASIC2.1□□□□□ -2.07
SMAD9O15198 MIR17-201ENST00000385012 84 ntBASIC2.1□□□□□ -2.07
SMAD9O15198 SNORA3.2-201ENST00000408221 125 ntBASIC2.1□□□□□ -2.07
SMAD9O15198 RNU6-1156P-201ENST00000410365 100 ntBASIC2.1□□□□□ -2.07
SMAD9O15198 RNU4-53P-201ENST00000410828 140 ntBASIC2.1□□□□□ -2.07
SMAD9O15198 RN7SKP192-201ENST00000411291 327 ntBASIC2.1□□□□□ -2.07
SMAD9O15198 RNA5SP233-201ENST00000459153 113 ntBASIC2.1□□□□□ -2.07
SMAD9O15198 AC055731.1-201ENST00000474387 401 ntBASIC2.1□□□□□ -2.07
SMAD9O15198 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.1□□□□□ -2.07
SMAD9O15198 RRN3P3-201ENST00000549207 578 ntBASIC2.1□□□□□ -2.07
SMAD9O15198 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.1□□□□□ -2.07
SMAD9O15198 AC078899.2-201ENST00000595282 212 ntBASIC2.1□□□□□ -2.07
SMAD9O15198 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.1□□□□□ -2.07
SMAD9O15198 AC005296.1-201ENST00000616145 209 ntBASIC2.1□□□□□ -2.07
SMAD9O15198 AL162373.1-201ENST00000620433 407 ntBASIC2.1□□□□□ -2.07
SMAD9O15198 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.09□□□□□ -2.07
SMAD9O15198 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
SMAD9O15198 AC005336.3-201ENST00000623833 2679 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 RNU6-490P-201ENST00000362985 107 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 Y_RNA.99-201ENST00000363138 105 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 Y_RNA.332-201ENST00000365271 113 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 Y_RNA.358-201ENST00000365491 99 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 MIR625-201ENST00000385047 85 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 MIR29C-201ENST00000385231 88 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 MIR300-201ENST00000401138 83 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 U3.40-201ENST00000408706 208 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.09□□□□□ -2.07
SMAD9O15198 Z98742.3-201ENST00000418637 326 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 AC123900.1-201ENST00000420390 96 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 RNU7-152P-201ENST00000458982 64 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 AC105758.1-201ENST00000506038 399 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 RNU1-117P-201ENST00000517041 158 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 RNU2-19P-201ENST00000517288 84 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 AC090617.3-201ENST00000573670 475 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 MIR4524B-201ENST00000581569 115 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 MIR4753-201ENST00000585119 83 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 AC007229.1-201ENST00000590455 412 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 AC080078.3-201ENST00000605407 463 ntBASIC2.09□□□□□ -2.07
SMAD9O15198 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
SMAD9O15198 RNA5SP276-201ENST00000362580 94 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms