Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 Y_RNA.60-201ENST00000362831 98 ntBASIC1.71□□□□□ -2.14
CUX2O14529 RNU6-23P-201ENST00000363283 107 ntBASIC1.71□□□□□ -2.14
CUX2O14529 SNORD73A-201ENST00000386062 65 ntBASIC1.71□□□□□ -2.14
CUX2O14529 RNU2-41P-201ENST00000410991 178 ntBASIC1.71□□□□□ -2.14
CUX2O14529 AL663109.1-201ENST00000411498 844 ntBASIC1.71□□□□□ -2.14
CUX2O14529 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.71□□□□□ -2.14
CUX2O14529 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.71□□□□□ -2.14
CUX2O14529 RNU7-14P-201ENST00000459331 62 ntBASIC1.71□□□□□ -2.14
CUX2O14529 AC104383.1-201ENST00000530297 370 ntBASIC1.71□□□□□ -2.14
CUX2O14529 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.71□□□□□ -2.14
CUX2O14529 RPL17P51-201ENST00000605218 238 ntBASIC1.71□□□□□ -2.14
CUX2O14529 AL050343.2-201ENST00000607338 280 ntBASIC1.71□□□□□ -2.14
CUX2O14529 AL357078.3-201ENST00000607528 618 ntBASIC1.71□□□□□ -2.14
CUX2O14529 Y_RNA.132-201ENST00000363421 102 ntBASIC1.7□□□□□ -2.14
CUX2O14529 RNU6-1085P-201ENST00000363576 107 ntBASIC1.7□□□□□ -2.14
CUX2O14529 RNU6-1119P-201ENST00000384349 108 ntBASIC1.7□□□□□ -2.14
CUX2O14529 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.7□□□□□ -2.14
CUX2O14529 MIR1285-1-201ENST00000408593 84 ntBASIC1.7□□□□□ -2.14
CUX2O14529 AC123900.1-201ENST00000420390 96 ntBASIC1.7□□□□□ -2.14
CUX2O14529 AC012306.1-201ENST00000423267 114 ntBASIC1.7□□□□□ -2.14
CUX2O14529 RPL23AP95-201ENST00000426806 265 ntBASIC1.7□□□□□ -2.14
CUX2O14529 MTND3P16-201ENST00000452205 344 ntBASIC1.7□□□□□ -2.14
CUX2O14529 RNU6-261P-201ENST00000459506 102 ntBASIC1.7□□□□□ -2.14
CUX2O14529 AC107401.1-201ENST00000503426 685 ntBASIC1.7□□□□□ -2.14
CUX2O14529 AC091133.4-201ENST00000511142 308 ntBASIC1.7□□□□□ -2.14
CUX2O14529 RNU6-323P-201ENST00000521915 107 ntBASIC1.7□□□□□ -2.14
CUX2O14529 AP005639.2-201ENST00000527592 928 ntBASIC1.7□□□□□ -2.14
CUX2O14529 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.7□□□□□ -2.14
CUX2O14529 MIR4424-201ENST00000585257 86 ntBASIC1.7□□□□□ -2.14
CUX2O14529 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.7□□□□□ -2.14
CUX2O14529 AC064807.4-201ENST00000607201 407 ntBASIC1.7□□□□□ -2.14
CUX2O14529 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.7□□□□□ -2.14
CUX2O14529 LINC02555-201ENST00000563933 1951 ntBASIC1.7□□□□□ -2.14
CUX2O14529 Y_RNA.280-201ENST00000364765 112 ntBASIC1.69□□□□□ -2.14
CUX2O14529 SNORA69-201ENST00000383895 132 ntBASIC1.69□□□□□ -2.14
CUX2O14529 RNU6-1093P-201ENST00000391194 107 ntBASIC1.69□□□□□ -2.14
CUX2O14529 RNA5SP201-201ENST00000410316 124 ntBASIC1.69□□□□□ -2.14
CUX2O14529 ARL5AP1-201ENST00000418991 388 ntBASIC1.69□□□□□ -2.14
CUX2O14529 NCOR1P3-201ENST00000420479 303 ntBASIC1.69□□□□□ -2.14
CUX2O14529 EIF4EP2-201ENST00000422816 654 ntBASIC1.69□□□□□ -2.14
CUX2O14529 SNRPEP8-201ENST00000442866 260 ntBASIC1.69□□□□□ -2.14
CUX2O14529 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.69□□□□□ -2.14
CUX2O14529 AL357134.1-201ENST00000445848 426 ntBASIC1.69□□□□□ -2.14
CUX2O14529 AL035666.1-201ENST00000446195 348 ntBASIC1.69□□□□□ -2.14
CUX2O14529 CENPUP1-201ENST00000526649 1202 ntBASIC1.69□□□□□ -2.14
CUX2O14529 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.69□□□□□ -2.14
CUX2O14529 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.69□□□□□ -2.14
CUX2O14529 MIR4713-201ENST00000582691 75 ntBASIC1.69□□□□□ -2.14
CUX2O14529 AL078605.1-201ENST00000603529 500 ntBASIC1.69□□□□□ -2.14
CUX2O14529 AC092747.3-201ENST00000603769 301 ntBASIC1.69□□□□□ -2.14
CUX2O14529 MTND5P26-201ENST00000426018 1752 ntBASIC1.69□□□□□ -2.14
CUX2O14529 Y_RNA.332-201ENST00000365271 113 ntBASIC1.69□□□□□ -2.14
CUX2O14529 RNU6-38P-201ENST00000384085 107 ntBASIC1.69□□□□□ -2.14
CUX2O14529 RNU6-214P-201ENST00000384130 107 ntBASIC1.69□□□□□ -2.14
CUX2O14529 SNORD116-2-201ENST00000384274 95 ntBASIC1.69□□□□□ -2.14
CUX2O14529 SNORD116-6-201ENST00000384711 96 ntBASIC1.69□□□□□ -2.14
CUX2O14529 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.69□□□□□ -2.14
CUX2O14529 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
CUX2O14529 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.69□□□□□ -2.14
CUX2O14529 AC091874.1-201ENST00000511402 339 ntBASIC1.69□□□□□ -2.14
CUX2O14529 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.69□□□□□ -2.14
CUX2O14529 NBR2-204ENST00000587322 63 ntBASIC1.69□□□□□ -2.14
CUX2O14529 Z98751.3-201ENST00000604447 521 ntBASIC1.69□□□□□ -2.14
CUX2O14529 AC004492.1-201ENST00000607036 742 ntBASIC1.69□□□□□ -2.14
CUX2O14529 AP001330.5-201ENST00000607176 411 ntBASIC1.69□□□□□ -2.14
CUX2O14529 AC103705.1-201ENST00000619013 241 ntBASIC1.69□□□□□ -2.14
CUX2O14529 AL136221.1-201ENST00000621449 509 ntBASIC1.69□□□□□ -2.14
CUX2O14529 OR5AK4P-201ENST00000635912 903 ntBASIC1.69□□□□□ -2.14
CUX2O14529 AC091812.1-201ENST00000432235 1948 ntBASIC1.68□□□□□ -2.14
CUX2O14529 AC018630.2-201ENST00000534866 2403 ntBASIC1.68□□□□□ -2.14
CUX2O14529 MIR208B-201ENST00000401172 77 ntBASIC1.68□□□□□ -2.14
CUX2O14529 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.68□□□□□ -2.14
CUX2O14529 U8.21-201ENST00000459536 136 ntBASIC1.68□□□□□ -2.14
CUX2O14529 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.68□□□□□ -2.14
CUX2O14529 CCDC34P1-201ENST00000507441 517 ntBASIC1.68□□□□□ -2.14
CUX2O14529 AC025465.4-201ENST00000513422 638 ntBASIC1.68□□□□□ -2.14
CUX2O14529 SNORA40.12-201ENST00000516329 111 ntBASIC1.68□□□□□ -2.14
CUX2O14529 AC090517.1-201ENST00000569307 266 ntBASIC1.68□□□□□ -2.14
CUX2O14529 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.68□□□□□ -2.14
CUX2O14529 CBX3P1-201ENST00000325243 554 ntBASIC1.67□□□□□ -2.14
CUX2O14529 RNU6-227P-201ENST00000362865 103 ntBASIC1.67□□□□□ -2.14
CUX2O14529 Y_RNA.378-201ENST00000365652 113 ntBASIC1.67□□□□□ -2.14
CUX2O14529 TIMM9P3-201ENST00000428659 274 ntBASIC1.67□□□□□ -2.14
CUX2O14529 AC083798.1-201ENST00000472671 131 ntBASIC1.67□□□□□ -2.14
CUX2O14529 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.67□□□□□ -2.14
CUX2O14529 RNU6-1069P-201ENST00000516612 133 ntBASIC1.67□□□□□ -2.14
CUX2O14529 RNU6-1098P-201ENST00000516772 96 ntBASIC1.67□□□□□ -2.14
CUX2O14529 RNU6-612P-201ENST00000516909 102 ntBASIC1.67□□□□□ -2.14
CUX2O14529 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.67□□□□□ -2.14
CUX2O14529 AC245008.1-201ENST00000608123 476 ntBASIC1.67□□□□□ -2.14
CUX2O14529 AC064836.2-201ENST00000609491 462 ntBASIC1.67□□□□□ -2.14
CUX2O14529 AL121757.2-201ENST00000611223 313 ntBASIC1.67□□□□□ -2.14
CUX2O14529 AL590240.4-201ENST00000616908 390 ntBASIC1.67□□□□□ -2.14
CUX2O14529 AL450472.1-202ENST00000637286 180 ntBASIC1.67□□□□□ -2.14
CUX2O14529 Y_RNA.51-201ENST00000362725 102 ntBASIC1.66□□□□□ -2.14
CUX2O14529 MTCO3P40-201ENST00000392516 676 ntBASIC1.66□□□□□ -2.14
CUX2O14529 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.66□□□□□ -2.14
CUX2O14529 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.66□□□□□ -2.14
CUX2O14529 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.66□□□□□ -2.14
CUX2O14529 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms