Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.6□□□□□ -2.15
SLC28A1O00337 AC025465.3-201ENST00000510570 311 ntBASIC1.6□□□□□ -2.15
SLC28A1O00337 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.6□□□□□ -2.15
SLC28A1O00337 RNU6-1198P-201ENST00000516904 67 ntBASIC1.6□□□□□ -2.15
SLC28A1O00337 AL353149.1-201ENST00000610667 244 ntBASIC1.6□□□□□ -2.15
SLC28A1O00337 AC093913.1-201ENST00000614178 329 ntBASIC1.6□□□□□ -2.15
SLC28A1O00337 MIR8074-201ENST00000615081 81 ntBASIC1.6□□□□□ -2.15
SLC28A1O00337 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.6□□□□□ -2.15
SLC28A1O00337 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.6□□□□□ -2.15
SLC28A1O00337 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
SLC28A1O00337 MIR424-201ENST00000362227 98 ntBASIC1.59□□□□□ -2.15
SLC28A1O00337 Y_RNA.6-201ENST00000362350 114 ntBASIC1.59□□□□□ -2.15
SLC28A1O00337 RNU6-1019P-201ENST00000364424 107 ntBASIC1.59□□□□□ -2.15
SLC28A1O00337 RNU6-245P-201ENST00000384020 107 ntBASIC1.59□□□□□ -2.15
SLC28A1O00337 MIR153-2-201ENST00000385225 87 ntBASIC1.59□□□□□ -2.15
SLC28A1O00337 MIR934-201ENST00000401241 83 ntBASIC1.59□□□□□ -2.15
SLC28A1O00337 MIR548F1-201ENST00000408667 84 ntBASIC1.59□□□□□ -2.15
SLC28A1O00337 EBAG9P1-201ENST00000418955 543 ntBASIC1.59□□□□□ -2.15
SLC28A1O00337 MTATP6P13-201ENST00000438531 667 ntBASIC1.59□□□□□ -2.15
SLC28A1O00337 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.59□□□□□ -2.15
SLC28A1O00337 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.59□□□□□ -2.15
SLC28A1O00337 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.59□□□□□ -2.15
SLC28A1O00337 snoU13.30-201ENST00000458951 104 ntBASIC1.59□□□□□ -2.15
SLC28A1O00337 AC092989.1-201ENST00000481235 277 ntBASIC1.59□□□□□ -2.15
SLC28A1O00337 RPS29P25-201ENST00000481709 171 ntBASIC1.59□□□□□ -2.15
SLC28A1O00337 HMGN1P13-201ENST00000505795 138 ntBASIC1.59□□□□□ -2.15
SLC28A1O00337 RNA5SP384-201ENST00000516615 116 ntBASIC1.59□□□□□ -2.15
SLC28A1O00337 RNU6-344P-201ENST00000516635 111 ntBASIC1.59□□□□□ -2.15
SLC28A1O00337 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.59□□□□□ -2.15
SLC28A1O00337 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.59□□□□□ -2.15
SLC28A1O00337 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.59□□□□□ -2.15
SLC28A1O00337 AL078596.1-201ENST00000624856 447 ntBASIC1.59□□□□□ -2.15
SLC28A1O00337 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.59□□□□□ -2.15
SLC28A1O00337 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.59□□□□□ -2.16
SLC28A1O00337 AC010615.1-201ENST00000594254 1764 ntBASIC1.59□□□□□ -2.16
SLC28A1O00337 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.59□□□□□ -2.16
SLC28A1O00337 SNORD115-8-201ENST00000363856 82 ntBASIC1.58□□□□□ -2.16
SLC28A1O00337 SNORD115-38-201ENST00000365037 82 ntBASIC1.58□□□□□ -2.16
SLC28A1O00337 RNA5SP363-201ENST00000365072 115 ntBASIC1.58□□□□□ -2.16
SLC28A1O00337 Y_RNA.319-201ENST00000365138 92 ntBASIC1.58□□□□□ -2.16
SLC28A1O00337 RNU6-831P-201ENST00000384548 107 ntBASIC1.58□□□□□ -2.16
SLC28A1O00337 RNU2-7P-201ENST00000410794 178 ntBASIC1.58□□□□□ -2.16
SLC28A1O00337 RNU6-1148P-201ENST00000410992 104 ntBASIC1.58□□□□□ -2.16
SLC28A1O00337 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.58□□□□□ -2.16
SLC28A1O00337 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.58□□□□□ -2.16
SLC28A1O00337 AC245047.4-201ENST00000433189 144 ntBASIC1.58□□□□□ -2.16
SLC28A1O00337 UBE2V1P8-201ENST00000437166 265 ntBASIC1.58□□□□□ -2.16
SLC28A1O00337 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.58□□□□□ -2.16
SLC28A1O00337 RPL23AP63-201ENST00000498752 471 ntBASIC1.58□□□□□ -2.16
SLC28A1O00337 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.58□□□□□ -2.16
SLC28A1O00337 RNU6-250P-201ENST00000516958 103 ntBASIC1.58□□□□□ -2.16
SLC28A1O00337 RNU1-117P-201ENST00000517041 158 ntBASIC1.58□□□□□ -2.16
SLC28A1O00337 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.58□□□□□ -2.16
SLC28A1O00337 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.58□□□□□ -2.16
SLC28A1O00337 7SK.7-201ENST00000603504 247 ntBASIC1.58□□□□□ -2.16
SLC28A1O00337 SNORD11B-201ENST00000607707 90 ntBASIC1.58□□□□□ -2.16
SLC28A1O00337 AC126177.8-201ENST00000618339 1015 ntBASIC1.58□□□□□ -2.16
SLC28A1O00337 AC008873.1-201ENST00000625051 138 ntBASIC1.58□□□□□ -2.16
SLC28A1O00337 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.58□□□□□ -2.16
SLC28A1O00337 AC068205.3-201ENST00000636385 468 ntBASIC1.58□□□□□ -2.16
SLC28A1O00337 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SLC28A1O00337 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SLC28A1O00337 RNU6-414P-201ENST00000363705 104 ntBASIC1.57□□□□□ -2.16
SLC28A1O00337 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.57□□□□□ -2.16
SLC28A1O00337 RNU6-541P-201ENST00000384709 110 ntBASIC1.57□□□□□ -2.16
SLC28A1O00337 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
SLC28A1O00337 AL117342.1-201ENST00000404861 406 ntBASIC1.57□□□□□ -2.16
SLC28A1O00337 CST2P1-201ENST00000425770 87 ntBASIC1.57□□□□□ -2.16
SLC28A1O00337 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.57□□□□□ -2.16
SLC28A1O00337 UBL5P3-201ENST00000475112 231 ntBASIC1.57□□□□□ -2.16
SLC28A1O00337 AC027575.1-201ENST00000481064 460 ntBASIC1.57□□□□□ -2.16
SLC28A1O00337 RPL36AP21-201ENST00000490372 323 ntBASIC1.57□□□□□ -2.16
SLC28A1O00337 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.57□□□□□ -2.16
SLC28A1O00337 RNU6-718P-201ENST00000516166 105 ntBASIC1.57□□□□□ -2.16
SLC28A1O00337 RNU6-58P-201ENST00000517143 103 ntBASIC1.57□□□□□ -2.16
SLC28A1O00337 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.57□□□□□ -2.16
SLC28A1O00337 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.57□□□□□ -2.16
SLC28A1O00337 HSBP1P1-201ENST00000555205 166 ntBASIC1.57□□□□□ -2.16
SLC28A1O00337 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.57□□□□□ -2.16
SLC28A1O00337 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.57□□□□□ -2.16
SLC28A1O00337 MIR502-201ENST00000606349 86 ntBASIC1.57□□□□□ -2.16
SLC28A1O00337 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
SLC28A1O00337 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
SLC28A1O00337 RNU6-57P-201ENST00000411348 103 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 RN7SKP101-201ENST00000411376 320 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.56□□□□□ -2.16
SLC28A1O00337 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.56□□□□□ -2.16
SLC28A1O00337 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.56□□□□□ -2.16
SLC28A1O00337 MTCO3P29-201ENST00000432119 779 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 HSPE1P9-201ENST00000440046 311 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 AC069257.2-201ENST00000441819 155 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 RNU7-57P-201ENST00000459540 60 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 FO393415.2-201ENST00000480085 343 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 RNU1-41P-201ENST00000516161 162 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 RNU6-1146P-201ENST00000516282 102 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 RNU1-48P-201ENST00000516400 162 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 RNU6-566P-201ENST00000516790 107 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 RNU6-1088P-201ENST00000516850 104 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 RNU1-54P-201ENST00000517181 120 ntBASIC1.56□□□□□ -2.16
SLC28A1O00337 RNA5SP454-201ENST00000517231 127 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms