Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC079354.2-201ENST00000453523 154 ntBASIC1.87□□□□□ -2.11
CCDC188H7C350 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC188H7C350 AC082651.2-201ENST00000496833 166 ntBASIC1.87□□□□□ -2.11
CCDC188H7C350 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.87□□□□□ -2.11
CCDC188H7C350 RNVU1-2-201ENST00000516326 135 ntBASIC1.87□□□□□ -2.11
CCDC188H7C350 RNU6-1198P-201ENST00000516904 67 ntBASIC1.87□□□□□ -2.11
CCDC188H7C350 RNA5SP54-201ENST00000516951 92 ntBASIC1.87□□□□□ -2.11
CCDC188H7C350 AC087441.2-201ENST00000529141 262 ntBASIC1.87□□□□□ -2.11
CCDC188H7C350 RRN3P3-201ENST00000549207 578 ntBASIC1.87□□□□□ -2.11
CCDC188H7C350 AC080078.2-201ENST00000603766 501 ntBASIC1.87□□□□□ -2.11
CCDC188H7C350 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC188H7C350 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
CCDC188H7C350 SNORD114-1-201ENST00000362705 72 ntBASIC1.86□□□□□ -2.11
CCDC188H7C350 RPL21P111-201ENST00000418453 477 ntBASIC1.86□□□□□ -2.11
CCDC188H7C350 AL445305.1-201ENST00000432577 575 ntBASIC1.86□□□□□ -2.11
CCDC188H7C350 Z82188.1-201ENST00000436709 154 ntBASIC1.86□□□□□ -2.11
CCDC188H7C350 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CCDC188H7C350 snoU13.30-201ENST00000458951 104 ntBASIC1.86□□□□□ -2.11
CCDC188H7C350 RPS29P25-201ENST00000481709 171 ntBASIC1.86□□□□□ -2.11
CCDC188H7C350 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC188H7C350 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.86□□□□□ -2.11
CCDC188H7C350 AF235103.2-201ENST00000525753 346 ntBASIC1.86□□□□□ -2.11
CCDC188H7C350 MIR4713-201ENST00000582691 75 ntBASIC1.86□□□□□ -2.11
CCDC188H7C350 AC011712.1-201ENST00000588959 234 ntBASIC1.86□□□□□ -2.11
CCDC188H7C350 AL109918.3-201ENST00000603072 338 ntBASIC1.86□□□□□ -2.11
CCDC188H7C350 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.86□□□□□ -2.11
CCDC188H7C350 AC084782.3-201ENST00000612282 578 ntBASIC1.86□□□□□ -2.11
CCDC188H7C350 AL078596.1-201ENST00000624856 447 ntBASIC1.86□□□□□ -2.11
CCDC188H7C350 RNU2-7P-201ENST00000410794 178 ntBASIC1.85□□□□□ -2.11
CCDC188H7C350 RPL30P16-201ENST00000419341 429 ntBASIC1.85□□□□□ -2.11
CCDC188H7C350 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC188H7C350 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC188H7C350 AL357134.1-201ENST00000445848 426 ntBASIC1.85□□□□□ -2.11
CCDC188H7C350 AC018710.1-201ENST00000506509 158 ntBASIC1.85□□□□□ -2.11
CCDC188H7C350 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC188H7C350 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC188H7C350 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.85□□□□□ -2.11
CCDC188H7C350 AC060780.3-201ENST00000589464 80 ntBASIC1.85□□□□□ -2.11
CCDC188H7C350 AC069114.2-201ENST00000604699 304 ntBASIC1.85□□□□□ -2.11
CCDC188H7C350 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.85□□□□□ -2.11
CCDC188H7C350 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.85□□□□□ -2.11
CCDC188H7C350 AL356776.1-201ENST00000406574 447 ntBASIC1.84□□□□□ -2.11
CCDC188H7C350 MIR1289-2-201ENST00000408360 111 ntBASIC1.84□□□□□ -2.11
CCDC188H7C350 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC188H7C350 MTND1P17-201ENST00000448961 204 ntBASIC1.84□□□□□ -2.11
CCDC188H7C350 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC188H7C350 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC188H7C350 AC007215.1-201ENST00000464893 276 ntBASIC1.84□□□□□ -2.11
CCDC188H7C350 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC188H7C350 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC188H7C350 RNU6-1041P-201ENST00000516254 102 ntBASIC1.84□□□□□ -2.11
CCDC188H7C350 Y_RNA.676-201ENST00000516393 96 ntBASIC1.84□□□□□ -2.11
CCDC188H7C350 SNORA25.14-201ENST00000516481 132 ntBASIC1.84□□□□□ -2.11
CCDC188H7C350 MTND4LP26-201ENST00000518144 282 ntBASIC1.84□□□□□ -2.11
CCDC188H7C350 MIR4742-201ENST00000581069 85 ntBASIC1.84□□□□□ -2.11
CCDC188H7C350 RNU6-1059P-201ENST00000363752 98 ntBASIC1.83□□□□□ -2.12
CCDC188H7C350 SNORD115-32-201ENST00000364079 82 ntBASIC1.83□□□□□ -2.12
CCDC188H7C350 U8.10-201ENST00000384260 133 ntBASIC1.83□□□□□ -2.12
CCDC188H7C350 Y_RNA.533-201ENST00000384596 114 ntBASIC1.83□□□□□ -2.12
CCDC188H7C350 MIR764-201ENST00000390811 85 ntBASIC1.83□□□□□ -2.12
CCDC188H7C350 MIR548F5-201ENST00000408421 86 ntBASIC1.83□□□□□ -2.12
CCDC188H7C350 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC188H7C350 USP9YP30-201ENST00000430729 455 ntBASIC1.83□□□□□ -2.12
CCDC188H7C350 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC188H7C350 AC016717.1-201ENST00000448918 286 ntBASIC1.83□□□□□ -2.12
CCDC188H7C350 AC107399.1-201ENST00000451226 265 ntBASIC1.83□□□□□ -2.12
CCDC188H7C350 AC069439.1-201ENST00000494739 167 ntBASIC1.83□□□□□ -2.12
CCDC188H7C350 AC116337.1-201ENST00000509680 687 ntBASIC1.83□□□□□ -2.12
CCDC188H7C350 RNU7-175P-201ENST00000515915 61 ntBASIC1.83□□□□□ -2.12
CCDC188H7C350 RNU6-948P-201ENST00000516374 107 ntBASIC1.83□□□□□ -2.12
CCDC188H7C350 RNU2-34P-201ENST00000516534 121 ntBASIC1.83□□□□□ -2.12
CCDC188H7C350 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC188H7C350 AC010928.2-201ENST00000588017 287 ntBASIC1.83□□□□□ -2.12
CCDC188H7C350 SNORD11B-201ENST00000607707 90 ntBASIC1.83□□□□□ -2.12
CCDC188H7C350 AC006001.4-201ENST00000622243 395 ntBASIC1.83□□□□□ -2.12
CCDC188H7C350 BX322639.1-202ENST00000423987 2213 ntBASIC1.83□□□□□ -2.12
CCDC188H7C350 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.82□□□□□ -2.12
CCDC188H7C350 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CCDC188H7C350 MIR340-201ENST00000362125 95 ntBASIC1.82□□□□□ -2.12
CCDC188H7C350 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.82□□□□□ -2.12
CCDC188H7C350 AL033519.2-201ENST00000403958 392 ntBASIC1.82□□□□□ -2.12
CCDC188H7C350 MIR1253-201ENST00000408273 105 ntBASIC1.82□□□□□ -2.12
CCDC188H7C350 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC188H7C350 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC188H7C350 MTCO1P44-201ENST00000441935 243 ntBASIC1.82□□□□□ -2.12
CCDC188H7C350 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC188H7C350 RNU6-329P-201ENST00000459618 107 ntBASIC1.82□□□□□ -2.12
CCDC188H7C350 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.82□□□□□ -2.12
CCDC188H7C350 RNU6-548P-201ENST00000517083 115 ntBASIC1.82□□□□□ -2.12
CCDC188H7C350 AL590705.4-201ENST00000532209 134 ntBASIC1.82□□□□□ -2.12
CCDC188H7C350 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC188H7C350 AC104581.2-201ENST00000572227 430 ntBASIC1.82□□□□□ -2.12
CCDC188H7C350 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.82□□□□□ -2.12
CCDC188H7C350 ZNF299P-201ENST00000406845 1804 ntBASIC1.82□□□□□ -2.12
CCDC188H7C350 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
CCDC188H7C350 Y_RNA.2-201ENST00000362330 96 ntBASIC1.81□□□□□ -2.12
CCDC188H7C350 RNU6-862P-201ENST00000362804 105 ntBASIC1.81□□□□□ -2.12
CCDC188H7C350 Y_RNA.72-201ENST00000362894 103 ntBASIC1.81□□□□□ -2.12
CCDC188H7C350 RNU1-96P-201ENST00000364163 162 ntBASIC1.81□□□□□ -2.12
CCDC188H7C350 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms