Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 AC026782.1-201ENST00000512952 449 ntBASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 RNU1-54P-201ENST00000517181 120 ntBASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 GNAI2P1-201ENST00000541815 315 ntBASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 RPL17P51-201ENST00000605218 238 ntBASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 AC018462.2-201ENST00000605375 395 ntBASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
NEDD8-MDP1E9PL57 RNU6-457P-201ENST00000363999 107 ntBASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 SNORD114-6-201ENST00000364393 72 ntBASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 SNORD81.2-201ENST00000365153 76 ntBASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 Y_RNA.533-201ENST00000384596 114 ntBASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 MIR29C-201ENST00000385231 88 ntBASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 SNORA40.19-201ENST00000390846 128 ntBASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 AL357139.1-201ENST00000407792 426 ntBASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 RNA5SP450-201ENST00000411206 102 ntBASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 AC074085.1-201ENST00000413598 418 ntBASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 BX510359.4-201ENST00000423750 193 ntBASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 RPS3AP52-201ENST00000435639 297 ntBASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 HMGN1P12-201ENST00000499125 195 ntBASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 Y_RNA.691-201ENST00000516611 103 ntBASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 RNA5SP490-201ENST00000517141 136 ntBASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 MIR4529-201ENST00000578110 78 ntBASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
NEDD8-MDP1E9PL57 SNORD115-3-201ENST00000363100 82 ntBASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 RNU4-9P-201ENST00000364951 139 ntBASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 SNORA18.2-201ENST00000383865 132 ntBASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 Y_RNA.473-201ENST00000384333 102 ntBASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 RNA5SP489-201ENST00000410986 109 ntBASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 AC004866.1-201ENST00000411748 78 ntBASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 AC123900.1-201ENST00000420390 96 ntBASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 AC096920.1-201ENST00000423991 241 ntBASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 RN7SKP210-201ENST00000459176 261 ntBASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 RNU7-14P-201ENST00000459331 62 ntBASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 RPS23P5-201ENST00000495419 428 ntBASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 HMGB3P17-201ENST00000504195 649 ntBASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 AC116353.2-201ENST00000505332 712 ntBASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 AC103851.1-201ENST00000506833 274 ntBASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 AC137590.2-201ENST00000619709 240 ntBASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
NEDD8-MDP1E9PL57 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.75□□□□□ -2.13
NEDD8-MDP1E9PL57 Y_RNA.88-201ENST00000363029 99 ntBASIC1.75□□□□□ -2.13
NEDD8-MDP1E9PL57 RNU6-595P-201ENST00000363944 107 ntBASIC1.75□□□□□ -2.13
NEDD8-MDP1E9PL57 SNORD115-32-201ENST00000364079 82 ntBASIC1.75□□□□□ -2.13
NEDD8-MDP1E9PL57 SNORD31B-201ENST00000364977 69 ntBASIC1.75□□□□□ -2.13
NEDD8-MDP1E9PL57 MIR32-201ENST00000384965 70 ntBASIC1.75□□□□□ -2.13
NEDD8-MDP1E9PL57 MIR676-201ENST00000390702 67 ntBASIC1.75□□□□□ -2.13
NEDD8-MDP1E9PL57 RNU4-14P-201ENST00000410858 122 ntBASIC1.75□□□□□ -2.13
NEDD8-MDP1E9PL57 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.75□□□□□ -2.13
NEDD8-MDP1E9PL57 AC016925.1-201ENST00000458303 298 ntBASIC1.75□□□□□ -2.13
NEDD8-MDP1E9PL57 snoU13.30-201ENST00000458951 104 ntBASIC1.75□□□□□ -2.13
NEDD8-MDP1E9PL57 RPL30P10-201ENST00000488148 337 ntBASIC1.75□□□□□ -2.13
NEDD8-MDP1E9PL57 Y_RNA.670-201ENST00000516255 105 ntBASIC1.75□□□□□ -2.13
NEDD8-MDP1E9PL57 RNU5F-4P-201ENST00000516581 114 ntBASIC1.75□□□□□ -2.13
NEDD8-MDP1E9PL57 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.75□□□□□ -2.13
NEDD8-MDP1E9PL57 MIR4273-201ENST00000582824 84 ntBASIC1.75□□□□□ -2.13
NEDD8-MDP1E9PL57 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.75□□□□□ -2.13
NEDD8-MDP1E9PL57 AC005562.2-201ENST00000618264 111 ntBASIC1.75□□□□□ -2.13
NEDD8-MDP1E9PL57 BX322639.1-202ENST00000423987 2213 ntBASIC1.75□□□□□ -2.13
NEDD8-MDP1E9PL57 Y_RNA.48-201ENST00000362710 103 ntBASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 SNORD115-8-201ENST00000363856 82 ntBASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 RNU6-593P-201ENST00000364716 112 ntBASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 SNORD115-38-201ENST00000365037 82 ntBASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 Y_RNA.482-201ENST00000384377 111 ntBASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 Y_RNA.594-201ENST00000410373 140 ntBASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 RNU6-1050P-201ENST00000410388 107 ntBASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 AC004386.2-201ENST00000441858 148 ntBASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 SNRPEP8-201ENST00000442866 260 ntBASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 AC245102.2-201ENST00000448956 180 ntBASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 AC107399.1-201ENST00000451226 265 ntBASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 MTCO3P8-201ENST00000453691 755 ntBASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 RNU6-1016P-201ENST00000516689 94 ntBASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 MIR3169-201ENST00000578032 83 ntBASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 MIR3618-201ENST00000580330 88 ntBASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 AL109918.3-201ENST00000603072 338 ntBASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 AC016727.1-205ENST00000605437 569 ntBASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 TCL6_2.1-201ENST00000615162 119 ntBASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.74□□□□□ -2.13
NEDD8-MDP1E9PL57 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
NEDD8-MDP1E9PL57 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
NEDD8-MDP1E9PL57 ZNF299P-201ENST00000406845 1804 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms