Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 AC139792.3-201ENST00000623525 224 ntBASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 AC005609.4-201ENST00000625071 447 ntBASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
RBFOX3A6NFN3 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 AL390237.1-201ENST00000404226 1415 ntBASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 RNY3P10-201ENST00000384764 102 ntBASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 MIR222-201ENST00000384992 110 ntBASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 RNA5SP467-201ENST00000391274 118 ntBASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 AC016909.1-201ENST00000415916 166 ntBASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 MTATP6P18-201ENST00000417994 673 ntBASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 AL606517.2-201ENST00000442855 241 ntBASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 SNRPGP9-201ENST00000456025 225 ntBASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 SRRM1P2-201ENST00000464531 1192 ntBASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 SNORA31.10-201ENST00000516482 106 ntBASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 AC146944.4-201ENST00000602697 718 ntBASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 SNRPGP20-201ENST00000604477 205 ntBASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 AL133216.2-202ENST00000634512 349 ntBASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 U6.108-201ENST00000637764 58 ntBASIC0.74□□□□□ -2.29
RBFOX3A6NFN3 RNU6-1305P-201ENST00000364353 104 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 RNU4-38P-201ENST00000364472 129 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 RNU1-36P-201ENST00000365130 165 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 SNORA67.2-201ENST00000384300 149 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 MT-TH-201ENST00000387441 69 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 RN7SKP200-201ENST00000410564 320 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 RNU6-57P-201ENST00000411348 103 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 MTND2P18-201ENST00000419962 1030 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 U8.21-201ENST00000459536 136 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 SNORA31.4-201ENST00000516049 129 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 SNORA14.1-201ENST00000516113 141 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 AC060788.1-201ENST00000521318 469 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 AC136932.1-201ENST00000574771 208 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 MIR3913-1-201ENST00000577744 102 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 AC013244.2-201ENST00000603396 103 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 AL513534.2-201ENST00000603836 250 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 AC022217.4-201ENST00000604389 163 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 AC008536.2-201ENST00000607284 349 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 AC109347.2-201ENST00000610220 349 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 AC087683.2-201ENST00000611384 326 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 AL021879.1-201ENST00000611756 288 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 HULC.1-201ENST00000612720 240 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 uc_338.34-201ENST00000617467 174 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 AC072046.2-201ENST00000618366 268 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 AC007494.3-201ENST00000624660 743 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 snoZ196.1-201ENST00000625269 89 ntBASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.73□□□□□ -2.29
RBFOX3A6NFN3 RNU4-79P-201ENST00000362764 141 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 Y_RNA.201-201ENST00000364052 96 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 RNU6-53P-201ENST00000365367 106 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 SNORD12-201ENST00000391002 90 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 RNU6-1054P-201ENST00000411293 104 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 AC008134.1-201ENST00000420943 193 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 AC010154.1-201ENST00000425857 269 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 TIMM9P3-201ENST00000428659 274 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 MTND3P9-201ENST00000429526 346 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 HSPE1P13-201ENST00000451143 297 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 RNU7-57P-201ENST00000459540 60 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 AC092991.1-201ENST00000477176 376 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 CCDC34P1-201ENST00000507441 517 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 RNU1-142P-201ENST00000516682 145 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 AC025647.1-201ENST00000517879 253 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 MTND4P7-201ENST00000523876 130 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 MIR5695-201ENST00000579717 85 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 FGF7P1-201ENST00000582820 288 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 AL359075.3-201ENST00000613288 217 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 AL513423.1-201ENST00000621695 132 ntBASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.72□□□□□ -2.29
RBFOX3A6NFN3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
RBFOX3A6NFN3 Y_RNA.159-201ENST00000363674 87 ntBASIC0.71□□□□□ -2.3
RBFOX3A6NFN3 Y_RNA.238-201ENST00000364441 102 ntBASIC0.71□□□□□ -2.3
RBFOX3A6NFN3 SNORA72.3-201ENST00000365074 132 ntBASIC0.71□□□□□ -2.3
RBFOX3A6NFN3 MIR146A-201ENST00000385201 99 ntBASIC0.71□□□□□ -2.3
RBFOX3A6NFN3 RNA5SP219-201ENST00000390940 113 ntBASIC0.71□□□□□ -2.3
RBFOX3A6NFN3 MTCYBP8-201ENST00000422855 651 ntBASIC0.71□□□□□ -2.3
RBFOX3A6NFN3 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.71□□□□□ -2.3
RBFOX3A6NFN3 AC073415.1-201ENST00000449240 153 ntBASIC0.71□□□□□ -2.3
RBFOX3A6NFN3 RNU6-221P-201ENST00000459541 99 ntBASIC0.71□□□□□ -2.3
RBFOX3A6NFN3 SNORA31.2-201ENST00000516019 134 ntBASIC0.71□□□□□ -2.3
RBFOX3A6NFN3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.71□□□□□ -2.3
RBFOX3A6NFN3 RNU6-344P-201ENST00000516635 111 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms