Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MIR5096-201ENST00000583713 70 ntBASIC4.36□□□□□ -1.71
RCCD1A6NED2 MIR4765-201ENST00000585007 77 ntBASIC4.36□□□□□ -1.71
RCCD1A6NED2 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RCCD1A6NED2 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RCCD1A6NED2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RCCD1A6NED2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RCCD1A6NED2 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RCCD1A6NED2 SNORA63.5-201ENST00000363548 123 ntBASIC4.35□□□□□ -1.71
RCCD1A6NED2 RNA5SP322-201ENST00000363617 119 ntBASIC4.35□□□□□ -1.71
RCCD1A6NED2 RNU1-132P-201ENST00000364300 164 ntBASIC4.35□□□□□ -1.71
RCCD1A6NED2 Y_RNA.366-201ENST00000365540 102 ntBASIC4.35□□□□□ -1.71
RCCD1A6NED2 RNU6-440P-201ENST00000390882 105 ntBASIC4.35□□□□□ -1.71
RCCD1A6NED2 RNA5SP38-201ENST00000410750 119 ntBASIC4.35□□□□□ -1.71
RCCD1A6NED2 RNA5SP112-201ENST00000515937 99 ntBASIC4.35□□□□□ -1.71
RCCD1A6NED2 RNU6-1149P-201ENST00000516810 97 ntBASIC4.35□□□□□ -1.71
RCCD1A6NED2 MIR4284-201ENST00000578924 81 ntBASIC4.35□□□□□ -1.71
RCCD1A6NED2 AL035470.1-201ENST00000622571 220 ntBASIC4.35□□□□□ -1.71
RCCD1A6NED2 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
RCCD1A6NED2 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.35□□□□□ -1.71
RCCD1A6NED2 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RCCD1A6NED2 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
RCCD1A6NED2 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.35□□□□□ -1.71
RCCD1A6NED2 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RCCD1A6NED2 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RCCD1A6NED2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC4.34□□□□□ -1.71
RCCD1A6NED2 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.34□□□□□ -1.71
RCCD1A6NED2 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.34□□□□□ -1.71
RCCD1A6NED2 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RCCD1A6NED2 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.34□□□□□ -1.71
RCCD1A6NED2 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
RCCD1A6NED2 RNU6-944P-201ENST00000364023 107 ntBASIC4.34□□□□□ -1.71
RCCD1A6NED2 SNORD24-201ENST00000383884 75 ntBASIC4.34□□□□□ -1.71
RCCD1A6NED2 RNU6-1274P-201ENST00000384557 107 ntBASIC4.34□□□□□ -1.71
RCCD1A6NED2 RNU1-89P-201ENST00000384592 164 ntBASIC4.34□□□□□ -1.71
RCCD1A6NED2 RNU2-37P-201ENST00000410695 177 ntBASIC4.34□□□□□ -1.71
RCCD1A6NED2 RN7SL810P-201ENST00000493031 276 ntBASIC4.34□□□□□ -1.71
RCCD1A6NED2 MIR378J-201ENST00000611988 109 ntBASIC4.34□□□□□ -1.71
RCCD1A6NED2 MIR7151-201ENST00000617477 60 ntBASIC4.34□□□□□ -1.71
RCCD1A6NED2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RCCD1A6NED2 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RCCD1A6NED2 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
RCCD1A6NED2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RCCD1A6NED2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.33□□□□□ -1.72
RCCD1A6NED2 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RCCD1A6NED2 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.33□□□□□ -1.72
RCCD1A6NED2 RNU6-888P-201ENST00000363010 101 ntBASIC4.33□□□□□ -1.72
RCCD1A6NED2 SNORD61-201ENST00000384252 73 ntBASIC4.33□□□□□ -1.72
RCCD1A6NED2 AL513477.1-202ENST00000417061 214 ntBASIC4.33□□□□□ -1.72
RCCD1A6NED2 DBIP2-201ENST00000419076 262 ntBASIC4.33□□□□□ -1.72
RCCD1A6NED2 RPS29P17-201ENST00000430795 166 ntBASIC4.33□□□□□ -1.72
RCCD1A6NED2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.33□□□□□ -1.72
RCCD1A6NED2 RNA5SP246-201ENST00000458909 119 ntBASIC4.33□□□□□ -1.72
RCCD1A6NED2 RN7SL860P-201ENST00000473738 223 ntBASIC4.33□□□□□ -1.72
RCCD1A6NED2 PPIAP15-201ENST00000479662 484 ntBASIC4.33□□□□□ -1.72
RCCD1A6NED2 NDUFA4P2-201ENST00000489989 244 ntBASIC4.33□□□□□ -1.72
RCCD1A6NED2 MRPS17P9-201ENST00000511924 393 ntBASIC4.33□□□□□ -1.72
RCCD1A6NED2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.33□□□□□ -1.72
RCCD1A6NED2 MIR4715-201ENST00000584117 79 ntBASIC4.33□□□□□ -1.72
RCCD1A6NED2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
RCCD1A6NED2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RCCD1A6NED2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RCCD1A6NED2 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.33□□□□□ -1.72
RCCD1A6NED2 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RCCD1A6NED2 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RCCD1A6NED2 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RCCD1A6NED2 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RCCD1A6NED2 RNY4P6-201ENST00000363667 96 ntBASIC4.32□□□□□ -1.72
RCCD1A6NED2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RCCD1A6NED2 RN7SKP202-201ENST00000410439 330 ntBASIC4.32□□□□□ -1.72
RCCD1A6NED2 AC011998.1-201ENST00000433403 117 ntBASIC4.32□□□□□ -1.72
RCCD1A6NED2 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.32□□□□□ -1.72
RCCD1A6NED2 RNU6-1096P-201ENST00000517089 102 ntBASIC4.32□□□□□ -1.72
RCCD1A6NED2 RNU6-1270P-201ENST00000517128 108 ntBASIC4.32□□□□□ -1.72
RCCD1A6NED2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.32□□□□□ -1.72
RCCD1A6NED2 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.32□□□□□ -1.72
RCCD1A6NED2 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RCCD1A6NED2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RCCD1A6NED2 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
RCCD1A6NED2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RCCD1A6NED2 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RCCD1A6NED2 MFSD8-242ENST00000641690 4199 ntBASIC4.32□□□□□ -1.72
RCCD1A6NED2 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RCCD1A6NED2 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RCCD1A6NED2 Y_RNA.198-201ENST00000364013 98 ntBASIC4.31□□□□□ -1.72
RCCD1A6NED2 Y_RNA.220-201ENST00000364244 109 ntBASIC4.31□□□□□ -1.72
RCCD1A6NED2 MIR520G-201ENST00000385064 90 ntBASIC4.31□□□□□ -1.72
RCCD1A6NED2 RNA5SP252-201ENST00000391131 119 ntBASIC4.31□□□□□ -1.72
RCCD1A6NED2 RNA5SP239-201ENST00000410218 129 ntBASIC4.31□□□□□ -1.72
RCCD1A6NED2 Y_RNA.621-201ENST00000411065 96 ntBASIC4.31□□□□□ -1.72
RCCD1A6NED2 RPL18P10-201ENST00000425606 538 ntBASIC4.31□□□□□ -1.72
RCCD1A6NED2 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.31□□□□□ -1.72
RCCD1A6NED2 AC011406.1-201ENST00000512440 370 ntBASIC4.31□□□□□ -1.72
RCCD1A6NED2 RNA5SP143-201ENST00000516936 115 ntBASIC4.31□□□□□ -1.72
RCCD1A6NED2 AC020914.4-201ENST00000597690 277 ntBASIC4.31□□□□□ -1.72
RCCD1A6NED2 MIR486-1-201ENST00000612171 68 ntBASIC4.31□□□□□ -1.72
RCCD1A6NED2 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.31□□□□□ -1.72
RCCD1A6NED2 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.31□□□□□ -1.72
RCCD1A6NED2 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
RCCD1A6NED2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RCCD1A6NED2 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms