Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 Y_RNA.401-201ENST00000383965 117 ntBASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 SNORA36A-201ENST00000384221 132 ntBASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 Y_RNA.551-201ENST00000384661 102 ntBASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 CBX3P9-201ENST00000402326 552 ntBASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 AC012306.1-201ENST00000423267 114 ntBASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 RPL23AP58-201ENST00000440453 469 ntBASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 DYNLT3P2-201ENST00000442517 295 ntBASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 SNORA25.11-201ENST00000515935 105 ntBASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 AC027176.1-201ENST00000560204 514 ntBASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 AL078605.1-201ENST00000603529 500 ntBASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 AL034555.1-201ENST00000604816 211 ntBASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
NR2E3Q9Y5X4 Y_RNA.105-201ENST00000363182 111 ntBASIC3.06□□□□□ -1.92
NR2E3Q9Y5X4 RNU6-17P-201ENST00000384245 107 ntBASIC3.06□□□□□ -1.92
NR2E3Q9Y5X4 RNU6-18P-201ENST00000384527 107 ntBASIC3.06□□□□□ -1.92
NR2E3Q9Y5X4 MT-TG-201ENST00000387429 68 ntBASIC3.06□□□□□ -1.92
NR2E3Q9Y5X4 RNA5SP274-201ENST00000410484 108 ntBASIC3.06□□□□□ -1.92
NR2E3Q9Y5X4 RPS26P42-201ENST00000413485 326 ntBASIC3.06□□□□□ -1.92
NR2E3Q9Y5X4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.06□□□□□ -1.92
NR2E3Q9Y5X4 MTCO3P8-201ENST00000453691 755 ntBASIC3.06□□□□□ -1.92
NR2E3Q9Y5X4 AC010469.2-201ENST00000496412 480 ntBASIC3.06□□□□□ -1.92
NR2E3Q9Y5X4 AC110588.1-201ENST00000559699 137 ntBASIC3.06□□□□□ -1.92
NR2E3Q9Y5X4 CYP4A27P-201ENST00000567218 190 ntBASIC3.06□□□□□ -1.92
NR2E3Q9Y5X4 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.06□□□□□ -1.92
NR2E3Q9Y5X4 MIR8062-201ENST00000621515 85 ntBASIC3.06□□□□□ -1.92
NR2E3Q9Y5X4 MIR6733-201ENST00000635723 61 ntBASIC3.06□□□□□ -1.92
NR2E3Q9Y5X4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 Y_RNA.4-201ENST00000362333 112 ntBASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 RNU6-1159P-201ENST00000362933 107 ntBASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 Y_RNA.338-201ENST00000365320 114 ntBASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 Y_RNA.358-201ENST00000365491 99 ntBASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 SNORA63.7-201ENST00000365579 123 ntBASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 SNORA51.11-201ENST00000384442 131 ntBASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 MIR153-2-201ENST00000385225 87 ntBASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 RNA5SP213-201ENST00000391031 106 ntBASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 MIR1302-3-201ENST00000408128 138 ntBASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 RNU6-1328P-201ENST00000410938 106 ntBASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 RPEP5-201ENST00000441137 268 ntBASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 RN7SL633P-201ENST00000488974 297 ntBASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 CKS1BP2-201ENST00000497342 240 ntBASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 RN7SKP43-201ENST00000516173 320 ntBASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 SCARNA3-201ENST00000517097 143 ntBASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 AC034114.1-201ENST00000520293 285 ntBASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 MIR3923-201ENST00000579521 83 ntBASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
NR2E3Q9Y5X4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 MIR32-201ENST00000384965 70 ntBASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 MT-TW-201ENST00000387382 68 ntBASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 RPL21P75-201ENST00000396599 483 ntBASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 RPL21P28-201ENST00000401418 483 ntBASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 U6atac.2-201ENST00000408644 118 ntBASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 RNU6-121P-201ENST00000410525 99 ntBASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 AL590556.1-201ENST00000423231 483 ntBASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 CBX3P6-201ENST00000430257 527 ntBASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 RPL21P39-201ENST00000463605 483 ntBASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 TOMM22P6-201ENST00000465035 409 ntBASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 AC087190.1-201ENST00000484462 480 ntBASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 AC107032.1-201ENST00000485945 480 ntBASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 AC093591.1-201ENST00000491435 481 ntBASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 RPL21P16-201ENST00000495531 483 ntBASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 RNU6-897P-201ENST00000517135 105 ntBASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 AC005520.5-201ENST00000613926 164 ntBASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 AC026241.1-201ENST00000517873 2142 ntBASIC3.04□□□□□ -1.92
NR2E3Q9Y5X4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.03□□□□□ -1.92
NR2E3Q9Y5X4 Y_RNA.64-201ENST00000362845 102 ntBASIC3.03□□□□□ -1.92
NR2E3Q9Y5X4 RNU4-50P-201ENST00000364361 141 ntBASIC3.03□□□□□ -1.92
NR2E3Q9Y5X4 RNU6-907P-201ENST00000390924 102 ntBASIC3.03□□□□□ -1.92
NR2E3Q9Y5X4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
NR2E3Q9Y5X4 HMGN2P3-201ENST00000433603 273 ntBASIC3.03□□□□□ -1.92
NR2E3Q9Y5X4 HMGN2P5-201ENST00000436882 273 ntBASIC3.03□□□□□ -1.92
NR2E3Q9Y5X4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.03□□□□□ -1.92
NR2E3Q9Y5X4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.03□□□□□ -1.92
NR2E3Q9Y5X4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.03□□□□□ -1.92
NR2E3Q9Y5X4 AL442163.3-201ENST00000554110 156 ntBASIC3.03□□□□□ -1.92
NR2E3Q9Y5X4 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.03□□□□□ -1.92
NR2E3Q9Y5X4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.03□□□□□ -1.92
NR2E3Q9Y5X4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms