Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 Y_RNA.105-201ENST00000363182 111 ntBASIC4.25□□□□□ -1.73
GTF3C3Q9Y5Q9 SNORD14D-201ENST00000384390 87 ntBASIC4.25□□□□□ -1.73
GTF3C3Q9Y5Q9 RNU1-148P-201ENST00000384472 162 ntBASIC4.25□□□□□ -1.73
GTF3C3Q9Y5Q9 AL139095.1-201ENST00000404326 391 ntBASIC4.25□□□□□ -1.73
GTF3C3Q9Y5Q9 RPL21P65-201ENST00000406094 466 ntBASIC4.25□□□□□ -1.73
GTF3C3Q9Y5Q9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC4.25□□□□□ -1.73
GTF3C3Q9Y5Q9 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.25□□□□□ -1.73
GTF3C3Q9Y5Q9 AC016717.1-201ENST00000448918 286 ntBASIC4.25□□□□□ -1.73
GTF3C3Q9Y5Q9 AC010531.2-201ENST00000465012 153 ntBASIC4.25□□□□□ -1.73
GTF3C3Q9Y5Q9 TRBVB-201ENST00000477100 408 ntBASIC4.25□□□□□ -1.73
GTF3C3Q9Y5Q9 RNU6-155P-201ENST00000516347 100 ntBASIC4.25□□□□□ -1.73
GTF3C3Q9Y5Q9 AP003730.1-201ENST00000524605 285 ntBASIC4.25□□□□□ -1.73
GTF3C3Q9Y5Q9 MIR4503-201ENST00000582187 83 ntBASIC4.25□□□□□ -1.73
GTF3C3Q9Y5Q9 MIR4658-201ENST00000584344 65 ntBASIC4.25□□□□□ -1.73
GTF3C3Q9Y5Q9 MIR3149-201ENST00000584629 83 ntBASIC4.25□□□□□ -1.73
GTF3C3Q9Y5Q9 AC037487.3-201ENST00000606668 112 ntBASIC4.25□□□□□ -1.73
GTF3C3Q9Y5Q9 AC090115.4-201ENST00000609970 188 ntBASIC4.25□□□□□ -1.73
GTF3C3Q9Y5Q9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
GTF3C3Q9Y5Q9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
GTF3C3Q9Y5Q9 Y_RNA.101-201ENST00000363154 102 ntBASIC4.24□□□□□ -1.73
GTF3C3Q9Y5Q9 Y_RNA.461-201ENST00000384263 103 ntBASIC4.24□□□□□ -1.73
GTF3C3Q9Y5Q9 Y_RNA.512-201ENST00000384518 102 ntBASIC4.24□□□□□ -1.73
GTF3C3Q9Y5Q9 MIR937-201ENST00000401271 86 ntBASIC4.24□□□□□ -1.73
GTF3C3Q9Y5Q9 AC139712.2-201ENST00000424302 339 ntBASIC4.24□□□□□ -1.73
GTF3C3Q9Y5Q9 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.24□□□□□ -1.73
GTF3C3Q9Y5Q9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.24□□□□□ -1.73
GTF3C3Q9Y5Q9 MTND4LP30-201ENST00000454092 297 ntBASIC4.24□□□□□ -1.73
GTF3C3Q9Y5Q9 AC098869.1-201ENST00000481627 292 ntBASIC4.24□□□□□ -1.73
GTF3C3Q9Y5Q9 RNU6-496P-201ENST00000516145 99 ntBASIC4.24□□□□□ -1.73
GTF3C3Q9Y5Q9 AC087499.8-201ENST00000578406 226 ntBASIC4.24□□□□□ -1.73
GTF3C3Q9Y5Q9 MIR5187-201ENST00000583479 76 ntBASIC4.24□□□□□ -1.73
GTF3C3Q9Y5Q9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
GTF3C3Q9Y5Q9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.23□□□□□ -1.73
GTF3C3Q9Y5Q9 Y_RNA.26-201ENST00000362539 101 ntBASIC4.23□□□□□ -1.73
GTF3C3Q9Y5Q9 SNORD9-201ENST00000362566 104 ntBASIC4.23□□□□□ -1.73
GTF3C3Q9Y5Q9 RNU6-702P-201ENST00000364982 107 ntBASIC4.23□□□□□ -1.73
GTF3C3Q9Y5Q9 Y_RNA.376-201ENST00000365638 108 ntBASIC4.23□□□□□ -1.73
GTF3C3Q9Y5Q9 SNORA53-201ENST00000391141 249 ntBASIC4.23□□□□□ -1.73
GTF3C3Q9Y5Q9 SNORD88.1-201ENST00000408684 91 ntBASIC4.23□□□□□ -1.73
GTF3C3Q9Y5Q9 AL356095.1-201ENST00000417217 199 ntBASIC4.23□□□□□ -1.73
GTF3C3Q9Y5Q9 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC4.23□□□□□ -1.73
GTF3C3Q9Y5Q9 RNU1-131P-201ENST00000458943 161 ntBASIC4.23□□□□□ -1.73
GTF3C3Q9Y5Q9 RPL21P10-201ENST00000463521 490 ntBASIC4.23□□□□□ -1.73
GTF3C3Q9Y5Q9 RNU6-1146P-201ENST00000516282 102 ntBASIC4.23□□□□□ -1.73
GTF3C3Q9Y5Q9 RNA5SP137-201ENST00000516833 135 ntBASIC4.23□□□□□ -1.73
GTF3C3Q9Y5Q9 RNU2-12P-201ENST00000517216 168 ntBASIC4.23□□□□□ -1.73
GTF3C3Q9Y5Q9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.23□□□□□ -1.73
GTF3C3Q9Y5Q9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.23□□□□□ -1.73
GTF3C3Q9Y5Q9 AL590240.4-201ENST00000616908 390 ntBASIC4.23□□□□□ -1.73
GTF3C3Q9Y5Q9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
GTF3C3Q9Y5Q9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.22□□□□□ -1.73
GTF3C3Q9Y5Q9 Y_RNA.84-201ENST00000363011 104 ntBASIC4.22□□□□□ -1.73
GTF3C3Q9Y5Q9 Y_RNA.193-201ENST00000363979 102 ntBASIC4.22□□□□□ -1.73
GTF3C3Q9Y5Q9 Y_RNA.288-201ENST00000364854 92 ntBASIC4.22□□□□□ -1.73
GTF3C3Q9Y5Q9 RNU6-1240P-201ENST00000365155 104 ntBASIC4.22□□□□□ -1.73
GTF3C3Q9Y5Q9 RNU4-30P-201ENST00000410245 143 ntBASIC4.22□□□□□ -1.73
GTF3C3Q9Y5Q9 RPL21P38-201ENST00000418090 167 ntBASIC4.22□□□□□ -1.73
GTF3C3Q9Y5Q9 AC024067.1-201ENST00000426199 223 ntBASIC4.22□□□□□ -1.73
GTF3C3Q9Y5Q9 AP002001.1-203ENST00000534002 267 ntBASIC4.22□□□□□ -1.73
GTF3C3Q9Y5Q9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC4.22□□□□□ -1.73
GTF3C3Q9Y5Q9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.22□□□□□ -1.73
GTF3C3Q9Y5Q9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC4.22□□□□□ -1.73
GTF3C3Q9Y5Q9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
GTF3C3Q9Y5Q9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC4.21□□□□□ -1.73
GTF3C3Q9Y5Q9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
GTF3C3Q9Y5Q9 VTRNA1-1-201ENST00000363120 99 ntBASIC4.21□□□□□ -1.74
GTF3C3Q9Y5Q9 RNU6-454P-201ENST00000364292 107 ntBASIC4.21□□□□□ -1.74
GTF3C3Q9Y5Q9 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.21□□□□□ -1.74
GTF3C3Q9Y5Q9 AC107222.1-201ENST00000510899 637 ntBASIC4.21□□□□□ -1.74
GTF3C3Q9Y5Q9 RNU6-570P-201ENST00000517051 105 ntBASIC4.21□□□□□ -1.74
GTF3C3Q9Y5Q9 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.21□□□□□ -1.74
GTF3C3Q9Y5Q9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.21□□□□□ -1.74
GTF3C3Q9Y5Q9 AC055872.1-201ENST00000570978 278 ntBASIC4.21□□□□□ -1.74
GTF3C3Q9Y5Q9 ARF4P1-201ENST00000605447 541 ntBASIC4.21□□□□□ -1.74
GTF3C3Q9Y5Q9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
GTF3C3Q9Y5Q9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
GTF3C3Q9Y5Q9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
GTF3C3Q9Y5Q9 snoU2_19.2-201ENST00000363024 80 ntBASIC4.2□□□□□ -1.74
GTF3C3Q9Y5Q9 RNA5SP387-201ENST00000364226 106 ntBASIC4.2□□□□□ -1.74
GTF3C3Q9Y5Q9 Y_RNA.243-201ENST00000364481 109 ntBASIC4.2□□□□□ -1.74
GTF3C3Q9Y5Q9 RNU6-290P-201ENST00000365212 101 ntBASIC4.2□□□□□ -1.74
GTF3C3Q9Y5Q9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.2□□□□□ -1.74
GTF3C3Q9Y5Q9 POLR2KP2-201ENST00000438155 177 ntBASIC4.2□□□□□ -1.74
GTF3C3Q9Y5Q9 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.2□□□□□ -1.74
GTF3C3Q9Y5Q9 AC010598.1-201ENST00000510378 103 ntBASIC4.2□□□□□ -1.74
GTF3C3Q9Y5Q9 SNORA70.12-201ENST00000516084 153 ntBASIC4.2□□□□□ -1.74
GTF3C3Q9Y5Q9 RNU6-856P-201ENST00000516959 98 ntBASIC4.2□□□□□ -1.74
GTF3C3Q9Y5Q9 AC025647.1-201ENST00000517879 253 ntBASIC4.2□□□□□ -1.74
GTF3C3Q9Y5Q9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC4.2□□□□□ -1.74
GTF3C3Q9Y5Q9 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.2□□□□□ -1.74
GTF3C3Q9Y5Q9 AC008745.1-201ENST00000604064 271 ntBASIC4.2□□□□□ -1.74
GTF3C3Q9Y5Q9 U6.115-201ENST00000636045 103 ntBASIC4.2□□□□□ -1.74
GTF3C3Q9Y5Q9 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
GTF3C3Q9Y5Q9 AC131280.1-202ENST00000624067 4211 ntBASIC4.2□□□□□ -1.74
GTF3C3Q9Y5Q9 RNU6-324P-201ENST00000363957 106 ntBASIC4.19□□□□□ -1.74
GTF3C3Q9Y5Q9 MIR30B-201ENST00000384850 88 ntBASIC4.19□□□□□ -1.74
GTF3C3Q9Y5Q9 RNU6-1248P-201ENST00000391096 64 ntBASIC4.19□□□□□ -1.74
GTF3C3Q9Y5Q9 MIR1262-201ENST00000408276 93 ntBASIC4.19□□□□□ -1.74
GTF3C3Q9Y5Q9 RNU6-1203P-201ENST00000410703 110 ntBASIC4.19□□□□□ -1.74
GTF3C3Q9Y5Q9 AL451074.5-201ENST00000415894 435 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 225.6 ms