Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC108206.1-201ENST00000570186 4159 ntBASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 MAPK10-266ENST00000641066 6555 ntBASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 MIR22-201ENST00000362190 85 ntBASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 SNORD56.5-201ENST00000364281 72 ntBASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 Y_RNA.439-201ENST00000384119 94 ntBASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 RNU2-32P-201ENST00000411193 191 ntBASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 RNU6-1001P-201ENST00000411265 100 ntBASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 DPH3P2-201ENST00000422618 250 ntBASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 AC010095.1-201ENST00000443543 144 ntBASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 UBBP3-201ENST00000445497 241 ntBASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 AC074290.1-201ENST00000448883 135 ntBASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 U6.92-201ENST00000636464 89 ntBASIC2.93□□□□□ -1.94
PCDHGA3Q9Y5H0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDHGA3Q9Y5H0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.92□□□□□ -1.94
PCDHGA3Q9Y5H0 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDHGA3Q9Y5H0 RNU6-944P-201ENST00000364023 107 ntBASIC2.92□□□□□ -1.94
PCDHGA3Q9Y5H0 RNU6-450P-201ENST00000364654 107 ntBASIC2.92□□□□□ -1.94
PCDHGA3Q9Y5H0 RNU6-234P-201ENST00000365229 104 ntBASIC2.92□□□□□ -1.94
PCDHGA3Q9Y5H0 RNU6-611P-201ENST00000384276 104 ntBASIC2.92□□□□□ -1.94
PCDHGA3Q9Y5H0 RNU6-1026P-201ENST00000384465 108 ntBASIC2.92□□□□□ -1.94
PCDHGA3Q9Y5H0 RNA5SP492-201ENST00000411330 114 ntBASIC2.92□□□□□ -1.94
PCDHGA3Q9Y5H0 AL139132.1-201ENST00000431587 344 ntBASIC2.92□□□□□ -1.94
PCDHGA3Q9Y5H0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDHGA3Q9Y5H0 RPL39P40-201ENST00000445481 146 ntBASIC2.92□□□□□ -1.94
PCDHGA3Q9Y5H0 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.92□□□□□ -1.94
PCDHGA3Q9Y5H0 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.92□□□□□ -1.94
PCDHGA3Q9Y5H0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDHGA3Q9Y5H0 MIR4659A-201ENST00000580269 81 ntBASIC2.92□□□□□ -1.94
PCDHGA3Q9Y5H0 AC240442.1-201ENST00000616055 283 ntBASIC2.92□□□□□ -1.94
PCDHGA3Q9Y5H0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PCDHGA3Q9Y5H0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 Y_RNA.458-201ENST00000384240 102 ntBASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 AL357139.1-201ENST00000407792 426 ntBASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 EEF1A1P41-201ENST00000414667 207 ntBASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 AC104389.3-201ENST00000445629 235 ntBASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 IFNA11P-201ENST00000446352 526 ntBASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 AC067942.3-201ENST00000512025 362 ntBASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 SNORA40.15-201ENST00000516884 107 ntBASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 AL117187.1-201ENST00000555482 181 ntBASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 AC233702.2-202ENST00000562547 291 ntBASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 ELOCP29-201ENST00000588193 334 ntBASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 AC068205.3-201ENST00000636385 468 ntBASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHGA3Q9Y5H0 RNA5SP361-201ENST00000362686 118 ntBASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 Y_RNA.176-201ENST00000363815 109 ntBASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 Y_RNA.183-201ENST00000363882 113 ntBASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU6-1310P-201ENST00000384153 107 ntBASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU6-708P-201ENST00000384217 107 ntBASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU6-851P-201ENST00000384565 107 ntBASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 AL033519.2-201ENST00000403958 392 ntBASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 AC022018.1-201ENST00000430685 241 ntBASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 AL445305.1-201ENST00000432577 575 ntBASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 RPEP5-201ENST00000441137 268 ntBASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 UQCRBP2-201ENST00000447827 297 ntBASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 NDUFB4P10-201ENST00000452541 359 ntBASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 AC114982.1-201ENST00000469402 321 ntBASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 AC091179.3-201ENST00000474761 144 ntBASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 AC010469.2-201ENST00000496412 480 ntBASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 RN7SKP43-201ENST00000516173 320 ntBASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 AC131281.1-201ENST00000522984 164 ntBASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 MIR3162-201ENST00000581818 82 ntBASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 AC090616.3-201ENST00000582184 217 ntBASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PCDHGA3Q9Y5H0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 Y_RNA.149-201ENST00000363558 117 ntBASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 Y_RNA.153-201ENST00000363615 91 ntBASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 Y_RNA.498-201ENST00000384460 102 ntBASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 AL356057.3-201ENST00000402607 340 ntBASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 AL390729.2-201ENST00000416137 156 ntBASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 AL358176.2-201ENST00000425769 204 ntBASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU7-14P-201ENST00000459331 62 ntBASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 SNORA40.9-201ENST00000515895 93 ntBASIC2.89□□□□□ -1.95
PCDHGA3Q9Y5H0 RNA5SP356-201ENST00000515972 94 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms