Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 MIR3923-201ENST00000579521 83 ntBASIC2.88□□□□□ -1.95
SSX2IPQ9Y2D8 RAC1P9-201ENST00000604990 392 ntBASIC2.88□□□□□ -1.95
SSX2IPQ9Y2D8 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.88□□□□□ -1.95
SSX2IPQ9Y2D8 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.88□□□□□ -1.95
SSX2IPQ9Y2D8 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.88□□□□□ -1.95
SSX2IPQ9Y2D8 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SSX2IPQ9Y2D8 MAPK10-266ENST00000641066 6555 ntBASIC2.88□□□□□ -1.95
SSX2IPQ9Y2D8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
SSX2IPQ9Y2D8 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 Y_RNA.214-201ENST00000364201 112 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 RNU6-702P-201ENST00000364982 107 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 RNU1-138P-201ENST00000384093 164 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 RNU1-57P-201ENST00000384491 166 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 RNU6-713P-201ENST00000384761 107 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 MIR186-201ENST00000384988 86 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 RNU6-159P-201ENST00000391080 106 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 RPEP5-201ENST00000441137 268 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 DYNLT3P2-201ENST00000442517 295 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 AP000705.1-201ENST00000454567 350 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 AC112771.1-201ENST00000463581 102 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 RNU6-897P-201ENST00000517135 105 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 RN7SKP40-201ENST00000517211 242 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 AC090517.1-201ENST00000569307 266 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 MIR3605-201ENST00000583214 100 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 AC005520.5-201ENST00000613926 164 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 AC005296.1-201ENST00000616145 209 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 UCA1.1-201ENST00000620952 75 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 AC010297.1-201ENST00000623948 149 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 AL359854.1-201ENST00000614203 1594 ntBASIC2.87□□□□□ -1.95
SSX2IPQ9Y2D8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 Y_RNA.40-201ENST00000362645 93 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 RNU6-1301P-201ENST00000362724 104 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 RNU6-655P-201ENST00000362858 107 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 RNU5F-3P-201ENST00000363767 117 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 RNU6-1210P-201ENST00000363775 107 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 Y_RNA.183-201ENST00000363882 113 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 RNU6-770P-201ENST00000363929 105 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 Y_RNA.193-201ENST00000363979 102 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 RNU6-879P-201ENST00000364328 108 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 RNU6-1083P-201ENST00000384022 107 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 Y_RNA.458-201ENST00000384240 102 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 MIR181A2-201ENST00000384863 110 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 MIR10B-201ENST00000385011 110 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 RNA5SP213-201ENST00000391031 106 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 SNORD78.2-201ENST00000391076 69 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 AC097463.2-201ENST00000421074 142 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 AIMP1P2-201ENST00000425294 312 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 RPS15AP7-201ENST00000439294 405 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 AC096638.1-201ENST00000444678 216 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 SNORA9.3-201ENST00000516383 129 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 MYL12BP1-201ENST00000569826 507 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 MIR3671-201ENST00000580455 88 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 AL049779.4-201ENST00000604500 156 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 AL034555.1-201ENST00000604816 211 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 AC010205.1-201ENST00000616668 449 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 AL590808.1-201ENST00000618696 141 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 U6.92-201ENST00000636464 89 ntBASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.86□□□□□ -1.95
SSX2IPQ9Y2D8 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 OR56A5-201ENST00000340110 738 ntBASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 RNU6-280P-201ENST00000364145 104 ntBASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 MIR627-201ENST00000384979 97 ntBASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 ELOCP20-201ENST00000422460 345 ntBASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 WARS2P1-201ENST00000429678 537 ntBASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 RPS3P1-201ENST00000456781 192 ntBASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 AC007215.1-201ENST00000464893 276 ntBASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 AC010469.2-201ENST00000496412 480 ntBASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 AC067942.3-201ENST00000512025 362 ntBASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 RNU6-397P-201ENST00000516226 104 ntBASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 RNY3P15-201ENST00000516297 97 ntBASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 RNA5SP282-201ENST00000516355 108 ntBASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 RNA5SP148-201ENST00000516527 94 ntBASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 MIR4765-201ENST00000585007 77 ntBASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 AC130454.1-201ENST00000622948 401 ntBASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.85□□□□□ -1.95
SSX2IPQ9Y2D8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
SSX2IPQ9Y2D8 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 201.7 ms