Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC010469.1-201ENST00000463864 576 ntBASIC5.3□□□□□ -1.56
PHF8Q9UPP1 AC022695.1-201ENST00000522089 237 ntBASIC5.3□□□□□ -1.56
PHF8Q9UPP1 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.3□□□□□ -1.56
PHF8Q9UPP1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC5.3□□□□□ -1.56
PHF8Q9UPP1 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHF8Q9UPP1 AC103988.1-201ENST00000566382 2177 ntBASIC5.3□□□□□ -1.56
PHF8Q9UPP1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHF8Q9UPP1 AL136360.1-201ENST00000503377 1900 ntBASIC5.3□□□□□ -1.56
PHF8Q9UPP1 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHF8Q9UPP1 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHF8Q9UPP1 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PHF8Q9UPP1 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.3□□□□□ -1.56
PHF8Q9UPP1 AL049781.1-201ENST00000623195 3585 ntBASIC5.29□□□□□ -1.56
PHF8Q9UPP1 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHF8Q9UPP1 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHF8Q9UPP1 AC139713.2-215ENST00000641428 5037 ntBASIC5.29□□□□□ -1.56
PHF8Q9UPP1 MIR199A2-201ENST00000385289 110 ntBASIC5.29□□□□□ -1.56
PHF8Q9UPP1 MIR300-201ENST00000401138 83 ntBASIC5.29□□□□□ -1.56
PHF8Q9UPP1 RNA5SP129-201ENST00000410276 118 ntBASIC5.29□□□□□ -1.56
PHF8Q9UPP1 Z92545.1-201ENST00000411782 234 ntBASIC5.29□□□□□ -1.56
PHF8Q9UPP1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC5.29□□□□□ -1.56
PHF8Q9UPP1 RNU7-57P-201ENST00000459540 60 ntBASIC5.29□□□□□ -1.56
PHF8Q9UPP1 AC010531.2-201ENST00000465012 153 ntBASIC5.29□□□□□ -1.56
PHF8Q9UPP1 RPL27AP5-201ENST00000469428 449 ntBASIC5.29□□□□□ -1.56
PHF8Q9UPP1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC5.29□□□□□ -1.56
PHF8Q9UPP1 AC078817.1-201ENST00000492623 435 ntBASIC5.29□□□□□ -1.56
PHF8Q9UPP1 RNA5SP236-201ENST00000516169 116 ntBASIC5.29□□□□□ -1.56
PHF8Q9UPP1 AC107934.2-201ENST00000518653 310 ntBASIC5.29□□□□□ -1.56
PHF8Q9UPP1 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.29□□□□□ -1.56
PHF8Q9UPP1 AC025521.1-201ENST00000621624 286 ntBASIC5.29□□□□□ -1.56
PHF8Q9UPP1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC5.29□□□□□ -1.56
PHF8Q9UPP1 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHF8Q9UPP1 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PHF8Q9UPP1 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PHF8Q9UPP1 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
PHF8Q9UPP1 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PHF8Q9UPP1 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHF8Q9UPP1 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
PHF8Q9UPP1 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.28□□□□□ -1.56
PHF8Q9UPP1 MIR450A2-201ENST00000385022 100 ntBASIC5.28□□□□□ -1.56
PHF8Q9UPP1 MIR1251-201ENST00000408552 70 ntBASIC5.28□□□□□ -1.56
PHF8Q9UPP1 SNORA3C-201ENST00000408792 125 ntBASIC5.28□□□□□ -1.56
PHF8Q9UPP1 ATP5A1P2-201ENST00000412323 255 ntBASIC5.28□□□□□ -1.56
PHF8Q9UPP1 AC245291.1-201ENST00000419501 328 ntBASIC5.28□□□□□ -1.56
PHF8Q9UPP1 CYCSP35-201ENST00000451978 304 ntBASIC5.28□□□□□ -1.56
PHF8Q9UPP1 SNORD11-201ENST00000459124 84 ntBASIC5.28□□□□□ -1.56
PHF8Q9UPP1 KRTAP13-6P-201ENST00000508999 371 ntBASIC5.28□□□□□ -1.56
PHF8Q9UPP1 RNU6-63P-201ENST00000516690 95 ntBASIC5.28□□□□□ -1.56
PHF8Q9UPP1 AC015720.1-201ENST00000565251 277 ntBASIC5.28□□□□□ -1.56
PHF8Q9UPP1 Pinc.1-201ENST00000616452 154 ntBASIC5.28□□□□□ -1.56
PHF8Q9UPP1 MIR2052-201ENST00000636055 55 ntBASIC5.28□□□□□ -1.56
PHF8Q9UPP1 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
PHF8Q9UPP1 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC5.28□□□□□ -1.56
PHF8Q9UPP1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC5.28□□□□□ -1.56
PHF8Q9UPP1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
PHF8Q9UPP1 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.27□□□□□ -1.57
PHF8Q9UPP1 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.27□□□□□ -1.57
PHF8Q9UPP1 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHF8Q9UPP1 MIR181A2-201ENST00000384863 110 ntBASIC5.27□□□□□ -1.57
PHF8Q9UPP1 RNA5SP511-201ENST00000410487 115 ntBASIC5.27□□□□□ -1.57
PHF8Q9UPP1 AC007064.1-201ENST00000412238 351 ntBASIC5.27□□□□□ -1.57
PHF8Q9UPP1 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC5.27□□□□□ -1.57
PHF8Q9UPP1 AC109327.2-201ENST00000448339 378 ntBASIC5.27□□□□□ -1.57
PHF8Q9UPP1 OR9P1P-201ENST00000496431 281 ntBASIC5.27□□□□□ -1.57
PHF8Q9UPP1 RNU5F-4P-201ENST00000516581 114 ntBASIC5.27□□□□□ -1.57
PHF8Q9UPP1 RNU6-158P-201ENST00000517104 100 ntBASIC5.27□□□□□ -1.57
PHF8Q9UPP1 RNU6-365P-201ENST00000517113 106 ntBASIC5.27□□□□□ -1.57
PHF8Q9UPP1 AC100770.1-201ENST00000532310 322 ntBASIC5.27□□□□□ -1.57
PHF8Q9UPP1 AL929325.1-201ENST00000603096 117 ntBASIC5.27□□□□□ -1.57
PHF8Q9UPP1 AC006435.5-201ENST00000624486 112 ntBASIC5.27□□□□□ -1.57
PHF8Q9UPP1 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PHF8Q9UPP1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PHF8Q9UPP1 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
PHF8Q9UPP1 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.26□□□□□ -1.57
PHF8Q9UPP1 RNU6-573P-201ENST00000383938 106 ntBASIC5.26□□□□□ -1.57
PHF8Q9UPP1 RNU1-57P-201ENST00000384491 166 ntBASIC5.26□□□□□ -1.57
PHF8Q9UPP1 MIR490-201ENST00000384865 128 ntBASIC5.26□□□□□ -1.57
PHF8Q9UPP1 MIR147B-201ENST00000390185 80 ntBASIC5.26□□□□□ -1.57
PHF8Q9UPP1 SNORA12-201ENST00000391162 147 ntBASIC5.26□□□□□ -1.57
PHF8Q9UPP1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PHF8Q9UPP1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.26□□□□□ -1.57
PHF8Q9UPP1 AC002075.2-201ENST00000425207 252 ntBASIC5.26□□□□□ -1.57
PHF8Q9UPP1 NDUFB1P1-201ENST00000435191 180 ntBASIC5.26□□□□□ -1.57
PHF8Q9UPP1 RNU6-221P-201ENST00000459541 99 ntBASIC5.26□□□□□ -1.57
PHF8Q9UPP1 Vault.1-201ENST00000516474 102 ntBASIC5.26□□□□□ -1.57
PHF8Q9UPP1 RNU7-149P-201ENST00000516739 59 ntBASIC5.26□□□□□ -1.57
PHF8Q9UPP1 AC007751.1-201ENST00000529260 376 ntBASIC5.26□□□□□ -1.57
PHF8Q9UPP1 AC005000.2-201ENST00000605468 310 ntBASIC5.26□□□□□ -1.57
PHF8Q9UPP1 Y_RNA.818-201ENST00000618813 71 ntBASIC5.26□□□□□ -1.57
PHF8Q9UPP1 MIR3651-201ENST00000630427 90 ntBASIC5.26□□□□□ -1.57
PHF8Q9UPP1 NEAT1-202ENST00000501122 22743 ntBASIC5.26□□□□□ -1.57
PHF8Q9UPP1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC5.25□□□□□ -1.57
PHF8Q9UPP1 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PHF8Q9UPP1 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PHF8Q9UPP1 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PHF8Q9UPP1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.25□□□□□ -1.57
PHF8Q9UPP1 snoU2_19.1-201ENST00000362361 80 ntBASIC5.25□□□□□ -1.57
PHF8Q9UPP1 MIR562-201ENST00000384894 95 ntBASIC5.25□□□□□ -1.57
PHF8Q9UPP1 MIR1283-1-201ENST00000408494 87 ntBASIC5.25□□□□□ -1.57
PHF8Q9UPP1 MIR1271-201ENST00000408537 86 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms