Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RNU6-856P-201ENST00000516959 98 ntBASIC2.12□□□□□ -2.07
BLOC1S4Q9NUP1 AF235103.2-201ENST00000525753 346 ntBASIC2.12□□□□□ -2.07
BLOC1S4Q9NUP1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.12□□□□□ -2.07
BLOC1S4Q9NUP1 MIR3945-201ENST00000581853 98 ntBASIC2.12□□□□□ -2.07
BLOC1S4Q9NUP1 MIR4273-201ENST00000582824 84 ntBASIC2.12□□□□□ -2.07
BLOC1S4Q9NUP1 AC083806.3-201ENST00000614016 455 ntBASIC2.12□□□□□ -2.07
BLOC1S4Q9NUP1 AC098679.4-201ENST00000624241 654 ntBASIC2.12□□□□□ -2.07
BLOC1S4Q9NUP1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.12□□□□□ -2.07
BLOC1S4Q9NUP1 U8.10-201ENST00000384260 133 ntBASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 Y_RNA.490-201ENST00000384413 102 ntBASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 MIR586-201ENST00000385035 97 ntBASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 MTATP6P13-201ENST00000438531 667 ntBASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 AC003989.2-201ENST00000440224 169 ntBASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 MTND1P17-201ENST00000448961 204 ntBASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 MTCO3P8-201ENST00000453691 755 ntBASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 UBL5P3-201ENST00000475112 231 ntBASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 RNVU1-2-201ENST00000516326 135 ntBASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 RNU6-344P-201ENST00000516635 111 ntBASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 RRN3P3-201ENST00000549207 578 ntBASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 AC010900.2-201ENST00000604508 210 ntBASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 BNIP3P10-201ENST00000605360 577 ntBASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 U6atac.1-201ENST00000616025 117 ntBASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 CENPCP1-201ENST00000533085 2578 ntBASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
BLOC1S4Q9NUP1 MTND4P1-201ENST00000457501 1466 ntBASIC2.1□□□□□ -2.07
BLOC1S4Q9NUP1 SNORD114-1-201ENST00000362705 72 ntBASIC2.1□□□□□ -2.07
BLOC1S4Q9NUP1 RNU6-1235P-201ENST00000384559 107 ntBASIC2.1□□□□□ -2.07
BLOC1S4Q9NUP1 MIR32-201ENST00000384965 70 ntBASIC2.1□□□□□ -2.07
BLOC1S4Q9NUP1 RNA5SP489-201ENST00000410986 109 ntBASIC2.1□□□□□ -2.07
BLOC1S4Q9NUP1 HMGN2P38-201ENST00000423806 265 ntBASIC2.1□□□□□ -2.07
BLOC1S4Q9NUP1 MTCO3P46-201ENST00000425787 232 ntBASIC2.1□□□□□ -2.07
BLOC1S4Q9NUP1 MTND1P4-201ENST00000435196 415 ntBASIC2.1□□□□□ -2.07
BLOC1S4Q9NUP1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.1□□□□□ -2.07
BLOC1S4Q9NUP1 RN7SKP210-201ENST00000459176 261 ntBASIC2.1□□□□□ -2.07
BLOC1S4Q9NUP1 RNU6-498P-201ENST00000459468 107 ntBASIC2.1□□□□□ -2.07
BLOC1S4Q9NUP1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.1□□□□□ -2.07
BLOC1S4Q9NUP1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.1□□□□□ -2.07
BLOC1S4Q9NUP1 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.1□□□□□ -2.07
BLOC1S4Q9NUP1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.1□□□□□ -2.07
BLOC1S4Q9NUP1 MIR5696-201ENST00000578474 85 ntBASIC2.1□□□□□ -2.07
BLOC1S4Q9NUP1 MIR3935-201ENST00000583472 104 ntBASIC2.1□□□□□ -2.07
BLOC1S4Q9NUP1 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.1□□□□□ -2.07
BLOC1S4Q9NUP1 ZNF204P-201ENST00000416749 2397 ntBASIC2.1□□□□□ -2.07
BLOC1S4Q9NUP1 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 Y_RNA.72-201ENST00000362894 103 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 Y_RNA.319-201ENST00000365138 92 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 RNA5SP100-201ENST00000410903 110 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 RNA5SP59-201ENST00000410922 110 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 EBAG9P1-201ENST00000418955 543 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 RN7SL429P-201ENST00000479090 223 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 RN7SL489P-201ENST00000486185 223 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 RN7SL327P-201ENST00000488659 223 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 RPS29P11-201ENST00000496507 171 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 RNU4-49P-201ENST00000516080 140 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 GNAI2P1-201ENST00000541815 315 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 SUB1P4-201ENST00000566062 339 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 MIR4790-201ENST00000577799 79 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 AC069114.2-201ENST00000604699 304 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 RN7SL853P-201ENST00000617250 223 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 AC009248.2-201ENST00000619826 254 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 DUXAP9-208ENST00000622815 614 ntBASIC2.09□□□□□ -2.07
BLOC1S4Q9NUP1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
BLOC1S4Q9NUP1 Y_RNA.86-201ENST00000363020 111 ntBASIC2.08□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-975P-201ENST00000384296 105 ntBASIC2.08□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-541P-201ENST00000384709 110 ntBASIC2.08□□□□□ -2.08
BLOC1S4Q9NUP1 SUMO2P12-201ENST00000405924 140 ntBASIC2.08□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-1148P-201ENST00000410992 104 ntBASIC2.08□□□□□ -2.08
BLOC1S4Q9NUP1 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.08□□□□□ -2.08
BLOC1S4Q9NUP1 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.08□□□□□ -2.08
BLOC1S4Q9NUP1 FGF7P6-202ENST00000451282 293 ntBASIC2.08□□□□□ -2.08
BLOC1S4Q9NUP1 RNU7-175P-201ENST00000515915 61 ntBASIC2.08□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-1088P-201ENST00000516850 104 ntBASIC2.08□□□□□ -2.08
BLOC1S4Q9NUP1 AC110588.1-201ENST00000559699 137 ntBASIC2.08□□□□□ -2.08
BLOC1S4Q9NUP1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.08□□□□□ -2.08
BLOC1S4Q9NUP1 AC060780.3-201ENST00000589464 80 ntBASIC2.08□□□□□ -2.08
BLOC1S4Q9NUP1 AL353149.1-201ENST00000610667 244 ntBASIC2.08□□□□□ -2.08
BLOC1S4Q9NUP1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
BLOC1S4Q9NUP1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
BLOC1S4Q9NUP1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-280P-201ENST00000364145 104 ntBASIC2.07□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-593P-201ENST00000364716 112 ntBASIC2.07□□□□□ -2.08
BLOC1S4Q9NUP1 Y_RNA.301-201ENST00000364990 103 ntBASIC2.07□□□□□ -2.08
BLOC1S4Q9NUP1 RNU6-306P-201ENST00000384617 107 ntBASIC2.07□□□□□ -2.08
BLOC1S4Q9NUP1 MIR9-3-201ENST00000385084 90 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms