Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AL162373.1-201ENST00000620433 407 ntBASIC2.37□□□□□ -2.03
SMC4Q9NTJ3 AC091932.3-201ENST00000624223 323 ntBASIC2.37□□□□□ -2.03
SMC4Q9NTJ3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.37□□□□□ -2.03
SMC4Q9NTJ3 Y_RNA.88-201ENST00000363029 99 ntBASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 SNORA16.1-201ENST00000364597 132 ntBASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 RNU6-842P-201ENST00000384269 107 ntBASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 RNU6-160P-201ENST00000384591 107 ntBASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 AC096920.1-201ENST00000423991 241 ntBASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 RPS3AP52-201ENST00000435639 297 ntBASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 AC079354.2-201ENST00000453523 154 ntBASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 RPL23AP3-201ENST00000453844 468 ntBASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 RNA5SP233-201ENST00000459153 113 ntBASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 RPS29P11-201ENST00000496507 171 ntBASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 POLR3GP2-201ENST00000588366 668 ntBASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 AC008749.1-201ENST00000597650 306 ntBASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 AC124303.1-201ENST00000605703 360 ntBASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 AC025754.2-201ENST00000606491 432 ntBASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 AL355073.2-201ENST00000612106 557 ntBASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 AC137590.2-201ENST00000619709 240 ntBASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 SDR42E1P4-201ENST00000620894 481 ntBASIC2.36□□□□□ -2.03
SMC4Q9NTJ3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 Y_RNA.48-201ENST00000362710 103 ntBASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 SNORD115-3-201ENST00000363100 82 ntBASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 SNORA72.1-201ENST00000363485 129 ntBASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 MIR9-3-201ENST00000385084 90 ntBASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 MIR549A-201ENST00000385268 96 ntBASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 SUMO2P12-201ENST00000405924 140 ntBASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 RNA5SP494-201ENST00000410653 129 ntBASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 RNU2-41P-201ENST00000410991 178 ntBASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 AC123900.1-201ENST00000420390 96 ntBASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 BX510359.4-201ENST00000423750 193 ntBASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 AL353572.1-201ENST00000442490 417 ntBASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 RNU1-131P-201ENST00000458943 161 ntBASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 AF186996.7-201ENST00000492781 209 ntBASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 AC005730.3-201ENST00000583067 366 ntBASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
SMC4Q9NTJ3 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 MIR764-201ENST00000390811 85 ntBASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 RNU6-482P-201ENST00000391068 107 ntBASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 RNU6-1093P-201ENST00000391194 107 ntBASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 AL356432.1-201ENST00000405809 419 ntBASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 RNA5SP489-201ENST00000410986 109 ntBASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 AL158823.1-201ENST00000418441 478 ntBASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 Z82188.1-201ENST00000436709 154 ntBASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 AL353689.1-201ENST00000438895 199 ntBASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 AC098614.3-201ENST00000438957 440 ntBASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 AC091951.2-201ENST00000500762 203 ntBASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 ATP5EP1-201ENST00000510257 156 ntBASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 RNU6-507P-201ENST00000516045 100 ntBASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 RNU5F-4P-201ENST00000516581 114 ntBASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 RNU2-44P-201ENST00000516795 194 ntBASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 AC026470.2-201ENST00000561492 181 ntBASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 AC090517.1-201ENST00000569307 266 ntBASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 RMST_6.1-201ENST00000611980 203 ntBASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.34□□□□□ -2.03
SMC4Q9NTJ3 ZNF702P-202ENST00000434269 1966 ntBASIC2.33□□□□□ -2.04
SMC4Q9NTJ3 LINC02555-201ENST00000563933 1951 ntBASIC2.33□□□□□ -2.04
SMC4Q9NTJ3 AC233981.2-201ENST00000611524 1614 ntBASIC2.33□□□□□ -2.04
SMC4Q9NTJ3 SNORD31B-201ENST00000364977 69 ntBASIC2.33□□□□□ -2.04
SMC4Q9NTJ3 MIR583-201ENST00000384846 75 ntBASIC2.33□□□□□ -2.04
SMC4Q9NTJ3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.33□□□□□ -2.04
SMC4Q9NTJ3 OR2AQ1P-201ENST00000451972 200 ntBASIC2.33□□□□□ -2.04
SMC4Q9NTJ3 AC016925.1-201ENST00000458303 298 ntBASIC2.33□□□□□ -2.04
SMC4Q9NTJ3 AC026782.1-201ENST00000512952 449 ntBASIC2.33□□□□□ -2.04
SMC4Q9NTJ3 RNU6-1098P-201ENST00000516772 96 ntBASIC2.33□□□□□ -2.04
SMC4Q9NTJ3 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.33□□□□□ -2.04
SMC4Q9NTJ3 AL121579.1-201ENST00000555129 305 ntBASIC2.33□□□□□ -2.04
SMC4Q9NTJ3 AC010928.2-201ENST00000588017 287 ntBASIC2.33□□□□□ -2.04
SMC4Q9NTJ3 AC012493.3-201ENST00000604494 112 ntBASIC2.33□□□□□ -2.04
SMC4Q9NTJ3 AL022345.1-201ENST00000607292 135 ntBASIC2.33□□□□□ -2.04
SMC4Q9NTJ3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.33□□□□□ -2.04
SMC4Q9NTJ3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
SMC4Q9NTJ3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SMC4Q9NTJ3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
SMC4Q9NTJ3 Y_RNA.166-201ENST00000363730 102 ntBASIC2.32□□□□□ -2.04
SMC4Q9NTJ3 SNORA40.18-201ENST00000391200 128 ntBASIC2.32□□□□□ -2.04
SMC4Q9NTJ3 RNU6-1304P-201ENST00000411374 106 ntBASIC2.32□□□□□ -2.04
SMC4Q9NTJ3 AC074085.1-201ENST00000413598 418 ntBASIC2.32□□□□□ -2.04
SMC4Q9NTJ3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
SMC4Q9NTJ3 AL035666.1-201ENST00000446195 348 ntBASIC2.32□□□□□ -2.04
SMC4Q9NTJ3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.32□□□□□ -2.04
SMC4Q9NTJ3 AC007215.1-201ENST00000464893 276 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 226.7 ms