Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.77□□□□□ -1.97
VPS45Q9NRW7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS45Q9NRW7 Y_RNA.40-201ENST00000362645 93 ntBASIC2.77□□□□□ -1.97
VPS45Q9NRW7 Y_RNA.358-201ENST00000365491 99 ntBASIC2.77□□□□□ -1.97
VPS45Q9NRW7 SNORD14.1-201ENST00000365609 90 ntBASIC2.77□□□□□ -1.97
VPS45Q9NRW7 Y_RNA.389-201ENST00000383924 113 ntBASIC2.77□□□□□ -1.97
VPS45Q9NRW7 Y_RNA.526-201ENST00000384572 110 ntBASIC2.77□□□□□ -1.97
VPS45Q9NRW7 RNU6-1072P-201ENST00000384703 107 ntBASIC2.77□□□□□ -1.97
VPS45Q9NRW7 RNU6-443P-201ENST00000384780 107 ntBASIC2.77□□□□□ -1.97
VPS45Q9NRW7 RNU6-101P-201ENST00000410323 104 ntBASIC2.77□□□□□ -1.97
VPS45Q9NRW7 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS45Q9NRW7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS45Q9NRW7 OR2AQ1P-201ENST00000451972 200 ntBASIC2.77□□□□□ -1.97
VPS45Q9NRW7 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.77□□□□□ -1.97
VPS45Q9NRW7 RNU7-26P-201ENST00000458980 63 ntBASIC2.77□□□□□ -1.97
VPS45Q9NRW7 RNU7-87P-201ENST00000459343 62 ntBASIC2.77□□□□□ -1.97
VPS45Q9NRW7 HMGB1P35-201ENST00000503360 598 ntBASIC2.77□□□□□ -1.97
VPS45Q9NRW7 MIR2355-201ENST00000517199 87 ntBASIC2.77□□□□□ -1.97
VPS45Q9NRW7 AC022616.4-201ENST00000522985 181 ntBASIC2.77□□□□□ -1.97
VPS45Q9NRW7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
VPS45Q9NRW7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS45Q9NRW7 AL078605.1-201ENST00000603529 500 ntBASIC2.77□□□□□ -1.97
VPS45Q9NRW7 Z98751.3-201ENST00000604447 521 ntBASIC2.77□□□□□ -1.97
VPS45Q9NRW7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.77□□□□□ -1.97
VPS45Q9NRW7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS45Q9NRW7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS45Q9NRW7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VPS45Q9NRW7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
VPS45Q9NRW7 Z82209.1-201ENST00000422141 2135 ntBASIC2.77□□□□□ -1.97
VPS45Q9NRW7 RNA5SP125-201ENST00000364843 120 ntBASIC2.76□□□□□ -1.97
VPS45Q9NRW7 SNORA67.4-201ENST00000384688 142 ntBASIC2.76□□□□□ -1.97
VPS45Q9NRW7 MIR592-201ENST00000384959 97 ntBASIC2.76□□□□□ -1.97
VPS45Q9NRW7 RNU6-823P-201ENST00000391042 103 ntBASIC2.76□□□□□ -1.97
VPS45Q9NRW7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.76□□□□□ -1.97
VPS45Q9NRW7 RPS26P42-201ENST00000413485 326 ntBASIC2.76□□□□□ -1.97
VPS45Q9NRW7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS45Q9NRW7 AC103975.1-201ENST00000482506 483 ntBASIC2.76□□□□□ -1.97
VPS45Q9NRW7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.76□□□□□ -1.97
VPS45Q9NRW7 RNA5SP148-201ENST00000516527 94 ntBASIC2.76□□□□□ -1.97
VPS45Q9NRW7 RNU6-1198P-201ENST00000516904 67 ntBASIC2.76□□□□□ -1.97
VPS45Q9NRW7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS45Q9NRW7 AC090617.3-201ENST00000573670 475 ntBASIC2.76□□□□□ -1.97
VPS45Q9NRW7 AL670379.2-201ENST00000604983 252 ntBASIC2.76□□□□□ -1.97
VPS45Q9NRW7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS45Q9NRW7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.76□□□□□ -1.97
VPS45Q9NRW7 ZNF72P-201ENST00000425869 1908 ntBASIC2.76□□□□□ -1.97
VPS45Q9NRW7 RNU6-137P-201ENST00000363680 108 ntBASIC2.75□□□□□ -1.97
VPS45Q9NRW7 SNORA38-201ENST00000363946 132 ntBASIC2.75□□□□□ -1.97
VPS45Q9NRW7 RNU1-112P-201ENST00000364401 164 ntBASIC2.75□□□□□ -1.97
VPS45Q9NRW7 U8.10-201ENST00000384260 133 ntBASIC2.75□□□□□ -1.97
VPS45Q9NRW7 RNU6-541P-201ENST00000384709 110 ntBASIC2.75□□□□□ -1.97
VPS45Q9NRW7 RN7SKP192-201ENST00000411291 327 ntBASIC2.75□□□□□ -1.97
VPS45Q9NRW7 AC112220.1-201ENST00000434628 355 ntBASIC2.75□□□□□ -1.97
VPS45Q9NRW7 snoU13.15-201ENST00000459407 104 ntBASIC2.75□□□□□ -1.97
VPS45Q9NRW7 AC140059.1-201ENST00000489238 361 ntBASIC2.75□□□□□ -1.97
VPS45Q9NRW7 RNU6-586P-201ENST00000517265 104 ntBASIC2.75□□□□□ -1.97
VPS45Q9NRW7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS45Q9NRW7 CYP4A27P-201ENST00000567218 190 ntBASIC2.75□□□□□ -1.97
VPS45Q9NRW7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS45Q9NRW7 MIR3923-201ENST00000579521 83 ntBASIC2.75□□□□□ -1.97
VPS45Q9NRW7 AC113195.1-201ENST00000579952 141 ntBASIC2.75□□□□□ -1.97
VPS45Q9NRW7 AC124312.5-201ENST00000604451 268 ntBASIC2.75□□□□□ -1.97
VPS45Q9NRW7 AL034555.1-201ENST00000604816 211 ntBASIC2.75□□□□□ -1.97
VPS45Q9NRW7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.75□□□□□ -1.97
VPS45Q9NRW7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VPS45Q9NRW7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS45Q9NRW7 MTND5P16-201ENST00000460269 1703 ntBASIC2.75□□□□□ -1.97
VPS45Q9NRW7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS45Q9NRW7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
VPS45Q9NRW7 Z82195.2-201ENST00000612348 18351 ntBASIC2.74□□□□□ -1.97
VPS45Q9NRW7 SNORA25.6-201ENST00000364121 118 ntBASIC2.74□□□□□ -1.97
VPS45Q9NRW7 Y_RNA.380-201ENST00000365663 111 ntBASIC2.74□□□□□ -1.97
VPS45Q9NRW7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.74□□□□□ -1.97
VPS45Q9NRW7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS45Q9NRW7 USP9YP16-201ENST00000430287 407 ntBASIC2.74□□□□□ -1.97
VPS45Q9NRW7 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS45Q9NRW7 MTCO3P8-201ENST00000453691 755 ntBASIC2.74□□□□□ -1.97
VPS45Q9NRW7 USP9YP23-201ENST00000455085 407 ntBASIC2.74□□□□□ -1.97
VPS45Q9NRW7 snoU13.6-201ENST00000458785 104 ntBASIC2.74□□□□□ -1.97
VPS45Q9NRW7 CKS1BP2-201ENST00000497342 240 ntBASIC2.74□□□□□ -1.97
VPS45Q9NRW7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS45Q9NRW7 SNORA25.11-201ENST00000515935 105 ntBASIC2.74□□□□□ -1.97
VPS45Q9NRW7 RNU6-1046P-201ENST00000516538 107 ntBASIC2.74□□□□□ -1.97
VPS45Q9NRW7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.74□□□□□ -1.97
VPS45Q9NRW7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS45Q9NRW7 AC040926.1-201ENST00000530195 238 ntBASIC2.74□□□□□ -1.97
VPS45Q9NRW7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS45Q9NRW7 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.74□□□□□ -1.97
VPS45Q9NRW7 AL078596.1-201ENST00000624856 447 ntBASIC2.74□□□□□ -1.97
VPS45Q9NRW7 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
VPS45Q9NRW7 ZNF658B-202ENST00000615961 3375 ntBASIC2.74□□□□□ -1.97
VPS45Q9NRW7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VPS45Q9NRW7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VPS45Q9NRW7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.73□□□□□ -1.97
VPS45Q9NRW7 SNORD115-8-201ENST00000363856 82 ntBASIC2.73□□□□□ -1.97
VPS45Q9NRW7 RNU6-450P-201ENST00000364654 107 ntBASIC2.73□□□□□ -1.97
VPS45Q9NRW7 SNORD115-38-201ENST00000365037 82 ntBASIC2.73□□□□□ -1.97
VPS45Q9NRW7 Y_RNA.319-201ENST00000365138 92 ntBASIC2.73□□□□□ -1.97
VPS45Q9NRW7 Y_RNA.557-201ENST00000384680 107 ntBASIC2.73□□□□□ -1.97
VPS45Q9NRW7 MIR561-201ENST00000385216 97 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms