Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 RNU7-115P-201ENST00000516433 55 ntBASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 AC021739.1-201ENST00000559631 174 ntBASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 AC027176.1-201ENST00000560204 514 ntBASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 AC025281.1-201ENST00000567026 265 ntBASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 PCGEM1.1-201ENST00000613431 131 ntBASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 AL121890.5-201ENST00000620848 304 ntBASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 AC010733.2-201ENST00000589496 5702 ntBASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NUCKS1Q9H1E3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 SNORD73B-201ENST00000364394 72 ntBASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 RNU6-880P-201ENST00000384526 107 ntBASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 AC006028.1-201ENST00000438379 402 ntBASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 HSPE1P5-201ENST00000561489 272 ntBASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 MIR4286-201ENST00000580651 93 ntBASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 MIR5006-201ENST00000583027 110 ntBASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 AL606490.9-201ENST00000603331 271 ntBASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 uc_338.28-201ENST00000612082 187 ntBASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NUCKS1Q9H1E3 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
NUCKS1Q9H1E3 RNU6-978P-201ENST00000364371 103 ntBASIC4.12□□□□□ -1.75
NUCKS1Q9H1E3 HSPE1P26-201ENST00000405341 275 ntBASIC4.12□□□□□ -1.75
NUCKS1Q9H1E3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.12□□□□□ -1.75
NUCKS1Q9H1E3 AL365496.1-201ENST00000426885 215 ntBASIC4.12□□□□□ -1.75
NUCKS1Q9H1E3 RPS29P7-201ENST00000439662 171 ntBASIC4.12□□□□□ -1.75
NUCKS1Q9H1E3 Z75741.1-201ENST00000446793 314 ntBASIC4.12□□□□□ -1.75
NUCKS1Q9H1E3 AC078817.1-201ENST00000492623 435 ntBASIC4.12□□□□□ -1.75
NUCKS1Q9H1E3 RNU2-60P-201ENST00000517290 128 ntBASIC4.12□□□□□ -1.75
NUCKS1Q9H1E3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.12□□□□□ -1.75
NUCKS1Q9H1E3 AC106785.1-201ENST00000565935 262 ntBASIC4.12□□□□□ -1.75
NUCKS1Q9H1E3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NUCKS1Q9H1E3 AL020997.2-201ENST00000602607 184 ntBASIC4.12□□□□□ -1.75
NUCKS1Q9H1E3 AC006133.1-201ENST00000617106 264 ntBASIC4.12□□□□□ -1.75
NUCKS1Q9H1E3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
NUCKS1Q9H1E3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NUCKS1Q9H1E3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NUCKS1Q9H1E3 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.12□□□□□ -1.75
NUCKS1Q9H1E3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NUCKS1Q9H1E3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 SNORA67.2-201ENST00000384300 149 ntBASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 Y_RNA.617-201ENST00000410920 90 ntBASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 IGKV2D-19-201ENST00000523346 262 ntBASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 EIF4A1P12-201ENST00000551910 141 ntBASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 RPL30P11-203ENST00000598995 310 ntBASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 AC024220.1-201ENST00000603675 484 ntBASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.11□□□□□ -1.75
NUCKS1Q9H1E3 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 AL513302.2-201ENST00000562313 1842 ntBASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 U3.8-201ENST00000363675 217 ntBASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 AP002088.1-201ENST00000382740 395 ntBASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 SNORA18.2-201ENST00000383865 132 ntBASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 MIR548A1-201ENST00000385041 97 ntBASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 RPS26P45-201ENST00000471748 340 ntBASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 AC023141.12-201ENST00000512399 199 ntBASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 RNU6-781P-201ENST00000516377 101 ntBASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 RNU6-197P-201ENST00000516680 100 ntBASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 SNORA50A-202ENST00000629536 136 ntBASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.1□□□□□ -1.75
NUCKS1Q9H1E3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
NUCKS1Q9H1E3 AC006504.1-201ENST00000562493 3666 ntBASIC4.09□□□□□ -1.75
NUCKS1Q9H1E3 U8.12-201ENST00000384701 133 ntBASIC4.09□□□□□ -1.75
NUCKS1Q9H1E3 AL139281.1-201ENST00000422120 335 ntBASIC4.09□□□□□ -1.75
NUCKS1Q9H1E3 HMGN2P21-201ENST00000447764 270 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms