Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 SNORD50.2-201ENST00000365465 70 ntBASIC3.41□□□□□ -1.86
RNF38Q9H0F5 RNU6-748P-201ENST00000384648 107 ntBASIC3.41□□□□□ -1.86
RNF38Q9H0F5 MIR147B-201ENST00000390185 80 ntBASIC3.41□□□□□ -1.86
RNF38Q9H0F5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
RNF38Q9H0F5 RNU4-47P-201ENST00000410876 114 ntBASIC3.41□□□□□ -1.86
RNF38Q9H0F5 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF38Q9H0F5 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF38Q9H0F5 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF38Q9H0F5 RPS29P2-201ENST00000479278 136 ntBASIC3.41□□□□□ -1.86
RNF38Q9H0F5 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF38Q9H0F5 CKS1BP7-201ENST00000522230 235 ntBASIC3.41□□□□□ -1.86
RNF38Q9H0F5 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.41□□□□□ -1.86
RNF38Q9H0F5 AL133393.1-201ENST00000603277 287 ntBASIC3.41□□□□□ -1.86
RNF38Q9H0F5 AC002064.3-201ENST00000623448 346 ntBASIC3.41□□□□□ -1.86
RNF38Q9H0F5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.41□□□□□ -1.86
RNF38Q9H0F5 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
RNF38Q9H0F5 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
RNF38Q9H0F5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.4□□□□□ -1.86
RNF38Q9H0F5 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
RNF38Q9H0F5 RNU6-653P-201ENST00000363074 106 ntBASIC3.4□□□□□ -1.87
RNF38Q9H0F5 Y_RNA.272-201ENST00000364696 102 ntBASIC3.4□□□□□ -1.87
RNF38Q9H0F5 RNU6-793P-201ENST00000384233 104 ntBASIC3.4□□□□□ -1.87
RNF38Q9H0F5 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF38Q9H0F5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.4□□□□□ -1.87
RNF38Q9H0F5 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF38Q9H0F5 RPS29P12-201ENST00000460178 152 ntBASIC3.4□□□□□ -1.87
RNF38Q9H0F5 RPS27P29-201ENST00000463110 252 ntBASIC3.4□□□□□ -1.87
RNF38Q9H0F5 RPL23AP67-201ENST00000465341 474 ntBASIC3.4□□□□□ -1.87
RNF38Q9H0F5 AC092185.1-201ENST00000491371 97 ntBASIC3.4□□□□□ -1.87
RNF38Q9H0F5 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.4□□□□□ -1.87
RNF38Q9H0F5 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.4□□□□□ -1.87
RNF38Q9H0F5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF38Q9H0F5 AC090897.2-201ENST00000581715 130 ntBASIC3.4□□□□□ -1.87
RNF38Q9H0F5 AC107294.3-201ENST00000609211 526 ntBASIC3.4□□□□□ -1.87
RNF38Q9H0F5 AL008718.3-201ENST00000610217 321 ntBASIC3.4□□□□□ -1.87
RNF38Q9H0F5 AC108706.1-201ENST00000611053 297 ntBASIC3.4□□□□□ -1.87
RNF38Q9H0F5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF38Q9H0F5 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF38Q9H0F5 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF38Q9H0F5 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF38Q9H0F5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF38Q9H0F5 AL021368.2-201ENST00000606125 5352 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RNF38Q9H0F5 RNU6-81P-201ENST00000365608 104 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF38Q9H0F5 Y_RNA.571-201ENST00000384753 98 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 SNORA26.3-201ENST00000391119 136 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 SNORA48.5-201ENST00000391143 135 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 MIR208B-201ENST00000401172 77 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 AL133475.1-201ENST00000404414 305 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 RNU2-2P-201ENST00000410396 191 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 ELOCP21-201ENST00000412558 336 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.39□□□□□ -1.87
RNF38Q9H0F5 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF38Q9H0F5 RN7SL442P-201ENST00000473804 320 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 MIR2276-201ENST00000516886 89 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 AC107934.2-201ENST00000518653 310 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 AP002001.1-203ENST00000534002 267 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 RNU2-4P-201ENST00000606190 192 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 U2.15-201ENST00000611544 191 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 uc_338.1-201ENST00000612113 180 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 U2.16-201ENST00000613119 191 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 U2.12-201ENST00000613778 191 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 U2.9-201ENST00000615427 191 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF38Q9H0F5 U2.11-201ENST00000616345 191 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 U2.2-201ENST00000616535 191 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 U2.3-201ENST00000617785 191 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 U2.19-201ENST00000618602 191 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 RNU2-1-201ENST00000618664 191 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 U2.6-201ENST00000619225 191 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 U2.5-201ENST00000619465 191 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 U2.10-201ENST00000620268 191 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF38Q9H0F5 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF38Q9H0F5 AC017071.1-201ENST00000564407 2204 ntBASIC3.39□□□□□ -1.87
RNF38Q9H0F5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RNF38Q9H0F5 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF38Q9H0F5 AC099654.7-201ENST00000635788 2127 ntBASIC3.38□□□□□ -1.87
RNF38Q9H0F5 PWAR6-201ENST00000552334 4618 ntBASIC3.38□□□□□ -1.87
RNF38Q9H0F5 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
RNF38Q9H0F5 RNU6-1272P-201ENST00000362776 107 ntBASIC3.38□□□□□ -1.87
RNF38Q9H0F5 RNU5F-3P-201ENST00000363767 117 ntBASIC3.38□□□□□ -1.87
RNF38Q9H0F5 Y_RNA.441-201ENST00000384123 112 ntBASIC3.38□□□□□ -1.87
RNF38Q9H0F5 RNU6-622P-201ENST00000384272 103 ntBASIC3.38□□□□□ -1.87
RNF38Q9H0F5 RNU6-1199P-201ENST00000411249 104 ntBASIC3.38□□□□□ -1.87
RNF38Q9H0F5 RPS26P42-201ENST00000413485 326 ntBASIC3.38□□□□□ -1.87
RNF38Q9H0F5 BMS1P22-201ENST00000414726 313 ntBASIC3.38□□□□□ -1.87
RNF38Q9H0F5 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF38Q9H0F5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.38□□□□□ -1.87
RNF38Q9H0F5 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.38□□□□□ -1.87
RNF38Q9H0F5 AC140059.1-201ENST00000489238 361 ntBASIC3.38□□□□□ -1.87
RNF38Q9H0F5 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.38□□□□□ -1.87
RNF38Q9H0F5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.38□□□□□ -1.87
RNF38Q9H0F5 MIR5692C2-201ENST00000577959 77 ntBASIC3.38□□□□□ -1.87
RNF38Q9H0F5 MIR2682-201ENST00000580305 110 ntBASIC3.38□□□□□ -1.87
RNF38Q9H0F5 AC008739.2-201ENST00000597006 317 ntBASIC3.38□□□□□ -1.87
RNF38Q9H0F5 SNORD98-201ENST00000636377 67 ntBASIC3.38□□□□□ -1.87
RNF38Q9H0F5 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF38Q9H0F5 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms