Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 Y_RNA.602-201ENST00000410535 92 ntBASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 AC139712.2-201ENST00000424302 339 ntBASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 EIF4EP4-201ENST00000424916 578 ntBASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 AC005002.2-201ENST00000438228 269 ntBASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 AC025750.2-201ENST00000442609 450 ntBASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 AC103975.1-201ENST00000482506 483 ntBASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 MTND1P19-201ENST00000511780 315 ntBASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 SNORA40.9-201ENST00000515895 93 ntBASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 Y_RNA.683-201ENST00000516508 93 ntBASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 AC012433.1-201ENST00000588916 398 ntBASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 MZT1P2-201ENST00000604387 248 ntBASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 SDR42E1P4-201ENST00000620894 481 ntBASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 MIR622-201ENST00000638396 96 ntBASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 MTND5P35-201ENST00000557537 1720 ntBASIC2.79□□□□□ -1.96
AMBRA1Q9C0C7 AC091564.4-201ENST00000533934 2194 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 snoU2_19.1-201ENST00000362361 80 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 RNU1-62P-201ENST00000362599 164 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 RNU6-961P-201ENST00000363893 105 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 Y_RNA.237-201ENST00000364439 102 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 SNORA20.1-201ENST00000364790 130 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 RNU6-1083P-201ENST00000384022 107 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 RNU6-20P-201ENST00000384106 107 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 RNU6-793P-201ENST00000384233 104 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 Y_RNA.581-201ENST00000391017 97 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 SNORD88.1-201ENST00000408684 91 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 RPL31P41-201ENST00000477967 372 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 AC145146.1-201ENST00000496370 254 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 SEPT14P8-201ENST00000508026 178 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 RAC1P5-201ENST00000512182 576 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 MRPS36P2-201ENST00000512569 299 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 AC074133.1-201ENST00000515696 183 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 RNU6-1023P-201ENST00000516137 106 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 SCARNA17.1-201ENST00000516211 143 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 SCARNA17.2-201ENST00000516334 143 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 DEFB108E-201ENST00000524692 240 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 AC004832.5-201ENST00000608677 401 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 AC013412.1-201ENST00000610687 192 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 SCARNA17.4-201ENST00000614296 143 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 AC002064.3-201ENST00000623448 346 ntBASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
AMBRA1Q9C0C7 AC069528.2-201ENST00000624849 1991 ntBASIC2.78□□□□□ -1.97
AMBRA1Q9C0C7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 AC026241.1-201ENST00000517873 2142 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 Y_RNA.257-201ENST00000364596 102 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 SNORA18.3-201ENST00000384122 132 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 Y_RNA.477-201ENST00000384352 108 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 Y_RNA.478-201ENST00000384358 107 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 AL512633.1-201ENST00000399931 655 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 ARL5AP4-201ENST00000430731 512 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 AC007395.1-201ENST00000451333 677 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 MTND4LP30-201ENST00000454092 297 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 RN7SL499P-201ENST00000481141 276 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 RPS23P5-201ENST00000495419 428 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 AC107222.1-201ENST00000510899 637 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 RNA5SP112-201ENST00000515937 99 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 RNU6-496P-201ENST00000516145 99 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 RNU6-1338P-201ENST00000516328 91 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 AC007536.1-201ENST00000533382 349 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 AK6P2-201ENST00000549020 471 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 RRN3P3-201ENST00000549207 578 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 AC233702.2-202ENST00000562547 291 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 MIR4435-1-201ENST00000582552 80 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 AC008739.2-201ENST00000597006 317 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 RPL30P11-203ENST00000598995 310 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 SNORD113-5-201ENST00000607261 78 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 AL357075.2-201ENST00000614906 189 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 FAM35CP-201ENST00000554755 2470 ntBASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
AMBRA1Q9C0C7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
AMBRA1Q9C0C7 RNU4-90P-201ENST00000362773 141 ntBASIC2.76□□□□□ -1.97
AMBRA1Q9C0C7 Y_RNA.230-201ENST00000364348 109 ntBASIC2.76□□□□□ -1.97
AMBRA1Q9C0C7 Y_RNA.498-201ENST00000384460 102 ntBASIC2.76□□□□□ -1.97
AMBRA1Q9C0C7 Y_RNA.541-201ENST00000384640 113 ntBASIC2.76□□□□□ -1.97
AMBRA1Q9C0C7 Y_RNA.552-201ENST00000384665 112 ntBASIC2.76□□□□□ -1.97
AMBRA1Q9C0C7 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms