Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 SCARNA4-201ENST00000629045 128 ntBASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRFN3Q9BTN0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 RNU6-746P-201ENST00000384112 109 ntBASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.581-201ENST00000391017 97 ntBASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 PCNPP3-201ENST00000393579 471 ntBASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 RNU2-20P-201ENST00000410425 191 ntBASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 RNU6-1140P-201ENST00000410517 106 ntBASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 AC019205.3-201ENST00000424573 156 ntBASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 AC016700.2-201ENST00000446011 156 ntBASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 CKS1BP2-201ENST00000497342 240 ntBASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.706-201ENST00000516933 99 ntBASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 SCARNA24.2-201ENST00000516968 130 ntBASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 MIR2355-201ENST00000517199 87 ntBASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 AC022868.1-201ENST00000517767 391 ntBASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 MIR4643-201ENST00000577473 78 ntBASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 MIR3616-201ENST00000584070 92 ntBASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 AC240442.1-201ENST00000616055 283 ntBASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRFN3Q9BTN0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 CBX3P9-201ENST00000402326 552 ntBASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 U6atac.2-201ENST00000408644 118 ntBASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 MIR1298-201ENST00000408783 112 ntBASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 AC009296.1-201ENST00000443146 155 ntBASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 RN7SKP282-201ENST00000516824 299 ntBASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 RNU6-1198P-201ENST00000516904 67 ntBASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 SCARNA3-201ENST00000517097 143 ntBASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 AC026241.1-201ENST00000517873 2142 ntBASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 AL670379.2-201ENST00000604983 252 ntBASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 Y_RNA.772-201ENST00000606692 102 ntBASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 uc_338.1-201ENST00000612113 180 ntBASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 AL353997.5-201ENST00000618886 171 ntBASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 SNORD98-201ENST00000636377 67 ntBASIC3.09□□□□□ -1.91
LRFN3Q9BTN0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
LRFN3Q9BTN0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.09□□□□□ -1.92
LRFN3Q9BTN0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LRFN3Q9BTN0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.09□□□□□ -1.92
LRFN3Q9BTN0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 Y_RNA.83-201ENST00000363005 113 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 SNORD115-32-201ENST00000364079 82 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 SNORA29-201ENST00000384183 140 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 Y_RNA.602-201ENST00000410535 92 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 EIF4EP4-201ENST00000424916 578 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 AC245517.4-201ENST00000448601 281 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 snoU13.30-201ENST00000458951 104 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 Y_RNA.644-201ENST00000459006 113 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 TOMM22P6-201ENST00000465035 409 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 AC091874.1-201ENST00000511402 339 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 Y_RNA.674-201ENST00000516362 113 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 RNU6-1012P-201ENST00000516606 109 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 AC023824.2-201ENST00000566185 400 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 AC090617.3-201ENST00000573670 475 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 MIR3923-201ENST00000579521 83 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 MIR3910-1-201ENST00000580936 111 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 RPL23AP88-201ENST00000605759 454 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 RMST_6.1-201ENST00000611980 203 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 uc_338.25-201ENST00000613756 156 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 AC127459.3-201ENST00000624328 466 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 SNORA43.4-201ENST00000629559 138 ntBASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.08□□□□□ -1.92
LRFN3Q9BTN0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 SNORD113-8-201ENST00000363497 74 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 RNA5SP68-201ENST00000363885 119 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 RNU6-187P-201ENST00000384139 106 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 Y_RNA.464-201ENST00000384282 110 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 RNU6-937P-201ENST00000384325 106 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 RNU6-102P-201ENST00000384485 104 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 MTCO2P33-201ENST00000402100 465 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 Y_RNA.793-201ENST00000411222 111 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 AL358453.1-201ENST00000422522 250 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 AC012306.1-201ENST00000423267 114 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 AC002075.2-201ENST00000425207 252 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 AIMP1P2-201ENST00000425294 312 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 Z82188.1-201ENST00000436709 154 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 AC146507.2-201ENST00000460608 476 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 AC080013.2-201ENST00000460866 323 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 AL121594.1-201ENST00000475906 575 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 AC090525.1-201ENST00000479116 478 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 RPL23AP75-201ENST00000491601 451 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 RNU5F-2P-201ENST00000516066 82 ntBASIC3.07□□□□□ -1.92
LRFN3Q9BTN0 RNU6-496P-201ENST00000516145 99 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms