Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 U3.8-201ENST00000363675 217 ntBASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 RNU6-1083P-201ENST00000384022 107 ntBASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 MIR626-201ENST00000385032 94 ntBASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 MIR29B2-201ENST00000385055 81 ntBASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 SNORA40-201ENST00000388090 126 ntBASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 Y_RNA.629-201ENST00000411368 105 ntBASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 AC097463.2-201ENST00000421074 142 ntBASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 AC002075.2-201ENST00000425207 252 ntBASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 RNA5SP112-201ENST00000515937 99 ntBASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 RNVU1-4-201ENST00000612985 164 ntBASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 Y_RNA.802-201ENST00000614892 130 ntBASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
TRIM56Q9BRZ2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 RNA5SP139-201ENST00000364340 117 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 Y_RNA.368-201ENST00000365547 113 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 RNA5SP424-201ENST00000390988 115 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 MIR513C-201ENST00000401352 84 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 SNORA11.1-201ENST00000408133 129 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 RNU6-257P-201ENST00000410238 98 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 RNU6-855P-201ENST00000410395 104 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 RNA5SP504-201ENST00000410676 117 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 RPL30P13-201ENST00000418873 348 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 AL445584.1-201ENST00000431451 330 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 HMGN2P31-201ENST00000432430 273 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 GOT2P5-201ENST00000433995 546 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 AL135790.2-201ENST00000437701 267 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 RPS29P31-201ENST00000446147 164 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 AC074290.1-201ENST00000448883 135 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 SRIP1-201ENST00000489235 288 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 SNORA70.12-201ENST00000516084 153 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 RNA5SP164-201ENST00000516533 110 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 RNU2-44P-201ENST00000516795 194 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 DEFB131C-201ENST00000528817 165 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 AC090616.3-201ENST00000582184 217 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 DNAJC19P2-201ENST00000593340 302 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 AL354798.1-201ENST00000622505 329 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 AC010332.2-201ENST00000613083 1904 ntBASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
TRIM56Q9BRZ2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
TRIM56Q9BRZ2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
TRIM56Q9BRZ2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.71□□□□□ -1.81
TRIM56Q9BRZ2 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 Y_RNA.456-201ENST00000384232 111 ntBASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 MIR449B-201ENST00000384995 97 ntBASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 AC146507.2-201ENST00000460608 476 ntBASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 RPS27P26-201ENST00000494583 239 ntBASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 MIR4644-201ENST00000579929 84 ntBASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 AC008739.3-201ENST00000603262 127 ntBASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 AL670379.2-201ENST00000604983 252 ntBASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 AL365222.1-201ENST00000614661 98 ntBASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 AC008873.1-201ENST00000625051 138 ntBASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 AC012442.3-202ENST00000636742 206 ntBASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 AC134026.1-201ENST00000623249 2239 ntBASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.71□□□□□ -1.82
TRIM56Q9BRZ2 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM56Q9BRZ2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
TRIM56Q9BRZ2 AC007256.1-201ENST00000392253 2765 ntBASIC3.7□□□□□ -1.82
TRIM56Q9BRZ2 Y_RNA.341-201ENST00000365341 102 ntBASIC3.7□□□□□ -1.82
TRIM56Q9BRZ2 MIR184-201ENST00000384962 84 ntBASIC3.7□□□□□ -1.82
TRIM56Q9BRZ2 AL139281.1-201ENST00000422120 335 ntBASIC3.7□□□□□ -1.82
TRIM56Q9BRZ2 EIF4EP4-201ENST00000424916 578 ntBASIC3.7□□□□□ -1.82
TRIM56Q9BRZ2 RPS29P2-201ENST00000479278 136 ntBASIC3.7□□□□□ -1.82
TRIM56Q9BRZ2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.7□□□□□ -1.82
TRIM56Q9BRZ2 RNU6-1231P-201ENST00000517185 103 ntBASIC3.7□□□□□ -1.82
TRIM56Q9BRZ2 MIR4738-201ENST00000579134 87 ntBASIC3.7□□□□□ -1.82
TRIM56Q9BRZ2 MIR5688-201ENST00000580619 83 ntBASIC3.7□□□□□ -1.82
TRIM56Q9BRZ2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.7□□□□□ -1.82
TRIM56Q9BRZ2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM56Q9BRZ2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM56Q9BRZ2 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
TRIM56Q9BRZ2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRIM56Q9BRZ2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
TRIM56Q9BRZ2 AC100821.1-201ENST00000523153 2479 ntBASIC3.69□□□□□ -1.82
TRIM56Q9BRZ2 AC000403.1-201ENST00000613696 3585 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms