Protein–RNA interactions for Protein: Q9BRR0

ZKSCAN3, Zinc finger protein with KRAB and SCAN domains 3, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3Q9BRR0 RN7SKP164-201ENST00000516138 266 ntBASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 AP000867.2-201ENST00000532468 320 ntBASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 MIR3684-201ENST00000579779 74 ntBASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 MIR5006-201ENST00000583027 110 ntBASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 AL137843.1-201ENST00000605078 385 ntBASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 AC096577.2-201ENST00000611455 153 ntBASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 AL138880.2-201ENST00000616214 239 ntBASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 Y_RNA.778-201ENST00000620203 90 ntBASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
ZKSCAN3Q9BRR0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU1-75P-201ENST00000347264 129 ntBASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU6-103P-201ENST00000363686 107 ntBASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU6-801P-201ENST00000364087 105 ntBASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 Y_RNA.287-201ENST00000364853 94 ntBASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 MIR186-201ENST00000384988 86 ntBASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU6-239P-201ENST00000390990 99 ntBASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 EBAG9P1-201ENST00000418955 543 ntBASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 RPS3P1-201ENST00000456781 192 ntBASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 RPL23AP67-201ENST00000465341 474 ntBASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU6-313P-201ENST00000516317 112 ntBASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 SNORD116-25-201ENST00000516517 92 ntBASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 AC013791.1-201ENST00000616619 62 ntBASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 TNPO1P3-201ENST00000436471 2662 ntBASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 Z83843.1-201ENST00000604070 3685 ntBASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ZKSCAN3Q9BRR0 AC010329.5-201ENST00000623497 2174 ntBASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU6-1210P-201ENST00000363775 107 ntBASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 SNORD87-201ENST00000364849 89 ntBASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 Y_RNA.333-201ENST00000365274 102 ntBASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 SNORA18.2-201ENST00000383865 132 ntBASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 CR769767.1-201ENST00000436337 346 ntBASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 RN7SL601P-201ENST00000471221 293 ntBASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 AC145146.1-201ENST00000496370 254 ntBASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU1-117P-201ENST00000517041 158 ntBASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 DEFB131C-201ENST00000528817 165 ntBASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 MIR7112-201ENST00000616126 65 ntBASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
ZKSCAN3Q9BRR0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.86□□□□□ -1.79
ZKSCAN3Q9BRR0 AC010680.1-201ENST00000590024 3590 ntBASIC3.86□□□□□ -1.79
ZKSCAN3Q9BRR0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.86□□□□□ -1.79
ZKSCAN3Q9BRR0 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.86□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU6-655P-201ENST00000362858 107 ntBASIC3.86□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU6-750P-201ENST00000390946 107 ntBASIC3.86□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU6-1154P-201ENST00000391001 104 ntBASIC3.86□□□□□ -1.79
ZKSCAN3Q9BRR0 RNA5SP504-201ENST00000410676 117 ntBASIC3.86□□□□□ -1.79
ZKSCAN3Q9BRR0 AL365496.1-201ENST00000426885 215 ntBASIC3.86□□□□□ -1.79
ZKSCAN3Q9BRR0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.86□□□□□ -1.79
ZKSCAN3Q9BRR0 MIR4744-201ENST00000581563 82 ntBASIC3.86□□□□□ -1.79
ZKSCAN3Q9BRR0 AL391813.1-201ENST00000603098 260 ntBASIC3.86□□□□□ -1.79
ZKSCAN3Q9BRR0 AC012531.5-201ENST00000611375 151 ntBASIC3.86□□□□□ -1.79
ZKSCAN3Q9BRR0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.86□□□□□ -1.79
ZKSCAN3Q9BRR0 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ZKSCAN3Q9BRR0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.86□□□□□ -1.79
ZKSCAN3Q9BRR0 AC026241.1-201ENST00000517873 2142 ntBASIC3.86□□□□□ -1.79
ZKSCAN3Q9BRR0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
ZKSCAN3Q9BRR0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.86□□□□□ -1.79
ZKSCAN3Q9BRR0 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 RNU6-151P-201ENST00000364158 107 ntBASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 Y_RNA.243-201ENST00000364481 109 ntBASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 AP002088.1-201ENST00000382740 395 ntBASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 SNORA8.3-201ENST00000384679 139 ntBASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 Y_RNA.586-201ENST00000391146 98 ntBASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 SNORA26.5-201ENST00000391215 123 ntBASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 RHEBP3-201ENST00000411920 351 ntBASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 AL135790.2-201ENST00000437701 267 ntBASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 AC021269.2-201ENST00000532318 330 ntBASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 AC025281.1-201ENST00000567026 265 ntBASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 MIR4431-201ENST00000579990 94 ntBASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 MIR4425-201ENST00000580572 84 ntBASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 uc_338.1-201ENST00000612113 180 ntBASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 RNVU1-4-201ENST00000612985 164 ntBASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
ZKSCAN3Q9BRR0 AC017071.1-201ENST00000564407 2204 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms