Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 RNU6-281P-201ENST00000384212 103 ntBASIC2.46□□□□□ -2.02
NPAS1Q99742 SNORA51.11-201ENST00000384442 131 ntBASIC2.46□□□□□ -2.02
NPAS1Q99742 Y_RNA.526-201ENST00000384572 110 ntBASIC2.46□□□□□ -2.02
NPAS1Q99742 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
NPAS1Q99742 RNU6-101P-201ENST00000410323 104 ntBASIC2.46□□□□□ -2.02
NPAS1Q99742 EIF1P2-201ENST00000428233 350 ntBASIC2.46□□□□□ -2.02
NPAS1Q99742 AC010095.1-201ENST00000443543 144 ntBASIC2.46□□□□□ -2.02
NPAS1Q99742 AC096638.1-201ENST00000444678 216 ntBASIC2.46□□□□□ -2.02
NPAS1Q99742 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
NPAS1Q99742 AC022616.8-201ENST00000533569 253 ntBASIC2.46□□□□□ -2.02
NPAS1Q99742 MIR5194-201ENST00000582634 120 ntBASIC2.46□□□□□ -2.02
NPAS1Q99742 MIR5188-201ENST00000583467 113 ntBASIC2.46□□□□□ -2.02
NPAS1Q99742 AC124312.5-201ENST00000604451 268 ntBASIC2.46□□□□□ -2.02
NPAS1Q99742 MIR7106-201ENST00000612419 65 ntBASIC2.46□□□□□ -2.02
NPAS1Q99742 ZNF271P-202ENST00000465539 1970 ntBASIC2.46□□□□□ -2.02
NPAS1Q99742 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.46□□□□□ -2.02
NPAS1Q99742 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.46□□□□□ -2.02
NPAS1Q99742 RNU6-793P-201ENST00000384233 104 ntBASIC2.45□□□□□ -2.02
NPAS1Q99742 MIR95-201ENST00000385072 81 ntBASIC2.45□□□□□ -2.02
NPAS1Q99742 Y_RNA.595-201ENST00000410403 105 ntBASIC2.45□□□□□ -2.02
NPAS1Q99742 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.45□□□□□ -2.02
NPAS1Q99742 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.45□□□□□ -2.02
NPAS1Q99742 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.45□□□□□ -2.02
NPAS1Q99742 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.45□□□□□ -2.02
NPAS1Q99742 SUMO1P4-201ENST00000429430 302 ntBASIC2.45□□□□□ -2.02
NPAS1Q99742 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.45□□□□□ -2.02
NPAS1Q99742 RNA5SP356-201ENST00000515972 94 ntBASIC2.45□□□□□ -2.02
NPAS1Q99742 SNORA40.14-201ENST00000516543 86 ntBASIC2.45□□□□□ -2.02
NPAS1Q99742 RNU6-667P-201ENST00000517186 102 ntBASIC2.45□□□□□ -2.02
NPAS1Q99742 SNORD58B-201ENST00000607313 66 ntBASIC2.45□□□□□ -2.02
NPAS1Q99742 AC138305.3-201ENST00000624988 240 ntBASIC2.45□□□□□ -2.02
NPAS1Q99742 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.45□□□□□ -2.02
NPAS1Q99742 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.45□□□□□ -2.02
NPAS1Q99742 Z82209.1-201ENST00000422141 2135 ntBASIC2.44□□□□□ -2.02
NPAS1Q99742 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
NPAS1Q99742 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.44□□□□□ -2.02
NPAS1Q99742 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.44□□□□□ -2.02
NPAS1Q99742 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.44□□□□□ -2.02
NPAS1Q99742 MIR26A1-201ENST00000362205 77 ntBASIC2.44□□□□□ -2.02
NPAS1Q99742 RNA5SP361-201ENST00000362686 118 ntBASIC2.44□□□□□ -2.02
NPAS1Q99742 RNA5SP393-201ENST00000363423 117 ntBASIC2.44□□□□□ -2.02
NPAS1Q99742 RNA5SP21-201ENST00000410917 96 ntBASIC2.44□□□□□ -2.02
NPAS1Q99742 RNU6-1001P-201ENST00000411265 100 ntBASIC2.44□□□□□ -2.02
NPAS1Q99742 CR769767.1-201ENST00000436337 346 ntBASIC2.44□□□□□ -2.02
NPAS1Q99742 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.44□□□□□ -2.02
NPAS1Q99742 Y_RNA.683-201ENST00000516508 93 ntBASIC2.44□□□□□ -2.02
NPAS1Q99742 RNU6-911P-201ENST00000516523 104 ntBASIC2.44□□□□□ -2.02
NPAS1Q99742 RNU6-107P-201ENST00000516643 102 ntBASIC2.44□□□□□ -2.02
NPAS1Q99742 RNA5SP490-201ENST00000517141 136 ntBASIC2.44□□□□□ -2.02
NPAS1Q99742 Y_RNA.721-201ENST00000517207 102 ntBASIC2.44□□□□□ -2.02
NPAS1Q99742 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.44□□□□□ -2.02
NPAS1Q99742 AL442163.3-201ENST00000554110 156 ntBASIC2.44□□□□□ -2.02
NPAS1Q99742 MIR4319-201ENST00000577285 85 ntBASIC2.44□□□□□ -2.02
NPAS1Q99742 AC025754.2-201ENST00000606491 432 ntBASIC2.44□□□□□ -2.02
NPAS1Q99742 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.44□□□□□ -2.02
NPAS1Q99742 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.44□□□□□ -2.02
NPAS1Q99742 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
NPAS1Q99742 MTND5P35-201ENST00000557537 1720 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
NPAS1Q99742 RNU1-62P-201ENST00000362599 164 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 Y_RNA.158-201ENST00000363651 101 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 RNU6-1305P-201ENST00000364353 104 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 SNORA25B-201ENST00000365507 128 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 DEFA7P-201ENST00000382676 285 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 RNU6-708P-201ENST00000384217 107 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 Y_RNA.527-201ENST00000384573 102 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 AL357139.1-201ENST00000407792 426 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.43□□□□□ -2.02
NPAS1Q99742 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.43□□□□□ -2.02
NPAS1Q99742 AC009237.7-201ENST00000447357 229 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 SNORD109B-201ENST00000458961 67 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 SNORD109A-201ENST00000459128 67 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.43□□□□□ -2.02
NPAS1Q99742 RNU6-475P-201ENST00000516073 104 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 AC040926.1-201ENST00000530195 238 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 AC018630.3-201ENST00000542637 96 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.43□□□□□ -2.02
NPAS1Q99742 MIR3605-201ENST00000583214 100 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 ELOCP29-201ENST00000588193 334 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 MZT1P2-201ENST00000604387 248 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 SNORD11B-201ENST00000607707 90 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 AL162373.1-201ENST00000620433 407 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 MIR1248-201ENST00000629190 106 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 AC099654.10-201ENST00000640395 161 ntBASIC2.43□□□□□ -2.02
NPAS1Q99742 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
NPAS1Q99742 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
NPAS1Q99742 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.42□□□□□ -2.02
NPAS1Q99742 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
NPAS1Q99742 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.42□□□□□ -2.02
NPAS1Q99742 Y_RNA.27-201ENST00000362540 103 ntBASIC2.42□□□□□ -2.02
NPAS1Q99742 RNU6-1301P-201ENST00000362724 104 ntBASIC2.42□□□□□ -2.02
NPAS1Q99742 SNORA5B-201ENST00000363786 132 ntBASIC2.42□□□□□ -2.02
NPAS1Q99742 RNU6-450P-201ENST00000364654 107 ntBASIC2.42□□□□□ -2.02
NPAS1Q99742 MIR592-201ENST00000384959 97 ntBASIC2.42□□□□□ -2.02
NPAS1Q99742 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NPAS1Q99742 SNORD12B-201ENST00000410433 91 ntBASIC2.42□□□□□ -2.02
NPAS1Q99742 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.42□□□□□ -2.02
NPAS1Q99742 UQCRBP2-201ENST00000447827 297 ntBASIC2.42□□□□□ -2.02
NPAS1Q99742 HMGN2P18-201ENST00000450680 270 ntBASIC2.42□□□□□ -2.02
NPAS1Q99742 SNORA4.4-201ENST00000515921 135 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms