Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.21□□□□□ -2.06
NEK1Q96PY6 AC022202.1-201ENST00000613515 211 ntBASIC2.21□□□□□ -2.06
NEK1Q96PY6 AC022306.2-201ENST00000617563 647 ntBASIC2.21□□□□□ -2.06
NEK1Q96PY6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
NEK1Q96PY6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
NEK1Q96PY6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
NEK1Q96PY6 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.2□□□□□ -2.06
NEK1Q96PY6 PDCL2P1-201ENST00000419302 352 ntBASIC2.2□□□□□ -2.06
NEK1Q96PY6 AC107032.1-201ENST00000485945 480 ntBASIC2.2□□□□□ -2.06
NEK1Q96PY6 HMGN1P12-201ENST00000499125 195 ntBASIC2.2□□□□□ -2.06
NEK1Q96PY6 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.2□□□□□ -2.06
NEK1Q96PY6 MRPS17P9-201ENST00000511924 393 ntBASIC2.2□□□□□ -2.06
NEK1Q96PY6 RNA5SP182-201ENST00000516064 82 ntBASIC2.2□□□□□ -2.06
NEK1Q96PY6 RNA5SP364-201ENST00000516938 78 ntBASIC2.2□□□□□ -2.06
NEK1Q96PY6 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.2□□□□□ -2.06
NEK1Q96PY6 AC005730.3-201ENST00000583067 366 ntBASIC2.2□□□□□ -2.06
NEK1Q96PY6 snoU13.31-201ENST00000607291 104 ntBASIC2.2□□□□□ -2.06
NEK1Q96PY6 uc_338.5-201ENST00000611839 155 ntBASIC2.2□□□□□ -2.06
NEK1Q96PY6 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.2□□□□□ -2.06
NEK1Q96PY6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
NEK1Q96PY6 RNU5B-2P-201ENST00000363036 113 ntBASIC2.19□□□□□ -2.06
NEK1Q96PY6 SNORD32B-201ENST00000364460 84 ntBASIC2.19□□□□□ -2.06
NEK1Q96PY6 SNORA16.1-201ENST00000364597 132 ntBASIC2.19□□□□□ -2.06
NEK1Q96PY6 SNORD81.2-201ENST00000365153 76 ntBASIC2.19□□□□□ -2.06
NEK1Q96PY6 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NEK1Q96PY6 RNU6-611P-201ENST00000384276 104 ntBASIC2.19□□□□□ -2.06
NEK1Q96PY6 Y_RNA.473-201ENST00000384333 102 ntBASIC2.19□□□□□ -2.06
NEK1Q96PY6 RNU2-48P-201ENST00000410694 191 ntBASIC2.19□□□□□ -2.06
NEK1Q96PY6 RPL37P10-201ENST00000412884 288 ntBASIC2.19□□□□□ -2.06
NEK1Q96PY6 AL137159.1-201ENST00000452808 512 ntBASIC2.19□□□□□ -2.06
NEK1Q96PY6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.19□□□□□ -2.06
NEK1Q96PY6 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.19□□□□□ -2.06
NEK1Q96PY6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.19□□□□□ -2.06
NEK1Q96PY6 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.19□□□□□ -2.06
NEK1Q96PY6 EIF4A1P12-201ENST00000551910 141 ntBASIC2.19□□□□□ -2.06
NEK1Q96PY6 AC110588.1-201ENST00000559699 137 ntBASIC2.19□□□□□ -2.06
NEK1Q96PY6 AL031274.2-201ENST00000599419 203 ntBASIC2.19□□□□□ -2.06
NEK1Q96PY6 AC243960.4-201ENST00000600532 288 ntBASIC2.19□□□□□ -2.06
NEK1Q96PY6 AL109918.3-201ENST00000603072 338 ntBASIC2.19□□□□□ -2.06
NEK1Q96PY6 MIR1248-201ENST00000629190 106 ntBASIC2.19□□□□□ -2.06
NEK1Q96PY6 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NEK1Q96PY6 MTND5P9-201ENST00000503854 1755 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
NEK1Q96PY6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
NEK1Q96PY6 SNORA72.1-201ENST00000363485 129 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 Y_RNA.166-201ENST00000363730 102 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 Y_RNA.355-201ENST00000365462 98 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 RNU6-26P-201ENST00000383985 107 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 AL512604.1-201ENST00000404812 257 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 AC108667.1-201ENST00000428618 249 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 AC245102.2-201ENST00000448956 180 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 AC079354.2-201ENST00000453523 154 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.18□□□□□ -2.06
NEK1Q96PY6 AC087477.1-201ENST00000465747 340 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 RPL23AP75-201ENST00000491601 451 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 AF186996.7-201ENST00000492781 209 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.18□□□□□ -2.06
NEK1Q96PY6 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.18□□□□□ -2.06
NEK1Q96PY6 AC005741.1-201ENST00000511094 432 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 AC107393.1-201ENST00000512403 346 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 RNA5SP445-201ENST00000515889 115 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.18□□□□□ -2.06
NEK1Q96PY6 AC090517.1-201ENST00000569307 266 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.18□□□□□ -2.06
NEK1Q96PY6 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 AL132822.1-201ENST00000617063 513 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.18□□□□□ -2.06
NEK1Q96PY6 TPTEP1-208ENST00000636884 213 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
NEK1Q96PY6 WWP1P1-201ENST00000466609 2769 ntBASIC2.18□□□□□ -2.06
NEK1Q96PY6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
NEK1Q96PY6 Y_RNA.339-201ENST00000365325 102 ntBASIC2.17□□□□□ -2.06
NEK1Q96PY6 Y_RNA.466-201ENST00000384294 113 ntBASIC2.17□□□□□ -2.06
NEK1Q96PY6 RNU6-601P-201ENST00000384540 107 ntBASIC2.17□□□□□ -2.06
NEK1Q96PY6 AL445685.2-201ENST00000422551 342 ntBASIC2.17□□□□□ -2.06
NEK1Q96PY6 EIF4EP2-201ENST00000422816 654 ntBASIC2.17□□□□□ -2.06
NEK1Q96PY6 AC003989.2-201ENST00000440224 169 ntBASIC2.17□□□□□ -2.06
NEK1Q96PY6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.17□□□□□ -2.06
NEK1Q96PY6 AC245517.4-201ENST00000448601 281 ntBASIC2.17□□□□□ -2.06
NEK1Q96PY6 MTND4P17-201ENST00000470444 350 ntBASIC2.17□□□□□ -2.06
NEK1Q96PY6 RN7SL274P-201ENST00000492268 272 ntBASIC2.17□□□□□ -2.06
NEK1Q96PY6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.17□□□□□ -2.06
NEK1Q96PY6 RNU6-1016P-201ENST00000516689 94 ntBASIC2.17□□□□□ -2.06
NEK1Q96PY6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.17□□□□□ -2.06
NEK1Q96PY6 AP000654.2-201ENST00000605633 586 ntBASIC2.17□□□□□ -2.06
NEK1Q96PY6 AL355073.2-201ENST00000612106 557 ntBASIC2.17□□□□□ -2.06
NEK1Q96PY6 AC005520.5-201ENST00000613926 164 ntBASIC2.17□□□□□ -2.06
NEK1Q96PY6 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NEK1Q96PY6 AC008555.8-201ENST00000623602 2168 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.16□□□□□ -2.06
NEK1Q96PY6 Y_RNA.2-201ENST00000362330 96 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 Y_RNA.48-201ENST00000362710 103 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 Y_RNA.88-201ENST00000363029 99 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 SNORD115-3-201ENST00000363100 82 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 Y_RNA.303-201ENST00000364998 94 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 Y_RNA.533-201ENST00000384596 114 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 MIR29C-201ENST00000385231 88 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 SNORA40.18-201ENST00000391200 128 ntBASIC2.16□□□□□ -2.06
NEK1Q96PY6 HMGN2P39-201ENST00000398005 273 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms