Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RNU6-203P-201ENST00000384038 104 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 RNU6-1215P-201ENST00000384441 102 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 Y_RNA.554-201ENST00000384672 102 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 RNU6-360P-201ENST00000390944 104 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 RNU1-78P-201ENST00000391248 165 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.26□□□□□ -2.21
COL21A1Q96P44 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.26□□□□□ -2.21
COL21A1Q96P44 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.26□□□□□ -2.21
COL21A1Q96P44 MTND4LP16-201ENST00000440828 295 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.26□□□□□ -2.21
COL21A1Q96P44 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 AC010409.1-201ENST00000487382 476 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 CCDC34P1-201ENST00000507441 517 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.26□□□□□ -2.21
COL21A1Q96P44 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.26□□□□□ -2.21
COL21A1Q96P44 RNU5F-4P-201ENST00000516581 114 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 Y_RNA.693-201ENST00000516641 110 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 RNU6-835P-201ENST00000516974 104 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.26□□□□□ -2.21
COL21A1Q96P44 AL512360.1-201ENST00000555346 234 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 TPRKBP2-201ENST00000565969 475 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.26□□□□□ -2.21
COL21A1Q96P44 AC009994.1-201ENST00000606889 253 ntBASIC1.26□□□□□ -2.21
COL21A1Q96P44 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
COL21A1Q96P44 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
COL21A1Q96P44 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.25□□□□□ -2.21
COL21A1Q96P44 SNORD33-201ENST00000362761 85 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 RNU6-1090P-201ENST00000364065 94 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 Y_RNA.374-201ENST00000365606 101 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 RNU6-483P-201ENST00000384088 108 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 Y_RNA.481-201ENST00000384373 102 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 RNU6-1026P-201ENST00000384465 108 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.25□□□□□ -2.21
COL21A1Q96P44 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.25□□□□□ -2.21
COL21A1Q96P44 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.25□□□□□ -2.21
COL21A1Q96P44 TIMM9P3-201ENST00000428659 274 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 AC015922.2-201ENST00000435593 184 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 AC069257.2-201ENST00000441819 155 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.25□□□□□ -2.21
COL21A1Q96P44 RPS4XP11-201ENST00000446897 772 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.25□□□□□ -2.21
COL21A1Q96P44 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.25□□□□□ -2.21
COL21A1Q96P44 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.25□□□□□ -2.21
COL21A1Q96P44 HMGN1P7-201ENST00000491722 313 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 AC082651.2-201ENST00000496833 166 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.25□□□□□ -2.21
COL21A1Q96P44 AC097473.1-201ENST00000508142 408 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 RNA5SP401-201ENST00000515920 127 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 RNA5SP102-201ENST00000516865 106 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.25□□□□□ -2.21
COL21A1Q96P44 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.25□□□□□ -2.21
COL21A1Q96P44 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.25□□□□□ -2.21
COL21A1Q96P44 HMGB1P33-201ENST00000563485 527 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 MIR4424-201ENST00000585257 86 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 AC078795.3-201ENST00000602913 472 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 AC069114.2-201ENST00000604699 304 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 AC098679.4-201ENST00000624241 654 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 MTND5P35-201ENST00000557537 1720 ntBASIC1.25□□□□□ -2.21
COL21A1Q96P44 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
COL21A1Q96P44 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
COL21A1Q96P44 Y_RNA.36-201ENST00000362602 112 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 RNU4-20P-201ENST00000365601 151 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 MIR520A-201ENST00000384862 85 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
COL21A1Q96P44 AL590002.1-201ENST00000406554 418 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 AL606923.1-201ENST00000406616 190 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 MIR1267-201ENST00000408723 78 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 RNU6-648P-201ENST00000410190 107 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 AC139712.2-201ENST00000424302 339 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.24□□□□□ -2.21
COL21A1Q96P44 SDAD1P3-201ENST00000427380 333 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 MTND3P21-201ENST00000433774 331 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.24□□□□□ -2.21
COL21A1Q96P44 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.24□□□□□ -2.21
COL21A1Q96P44 RNU7-14P-201ENST00000459331 62 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 RNU7-138P-201ENST00000459479 64 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 RNU6-261P-201ENST00000459506 102 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 RPL9P9-202ENST00000466501 579 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 RPS23P5-201ENST00000495419 428 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 RNU6-1281P-201ENST00000516223 105 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 RNU6-1038P-201ENST00000516516 104 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 RNU2-34P-201ENST00000516534 121 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 RNA5SP481-201ENST00000516814 122 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.24□□□□□ -2.21
COL21A1Q96P44 AC103996.1-201ENST00000555468 102 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 AL118558.2-201ENST00000556294 238 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 AC008269.2-201ENST00000561915 1105 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.24□□□□□ -2.21
COL21A1Q96P44 MIR4421-201ENST00000578133 69 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 AC068790.6-201ENST00000602558 258 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 uc_338.34-201ENST00000617467 174 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 MIR6515-201ENST00000619843 57 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 AC022513.1-201ENST00000624512 117 ntBASIC1.24□□□□□ -2.21
COL21A1Q96P44 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
COL21A1Q96P44 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
COL21A1Q96P44 Y_RNA.38-201ENST00000362617 102 ntBASIC1.23□□□□□ -2.21
COL21A1Q96P44 SNORA7.1-201ENST00000363750 139 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms