Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM47Q96LD4 RNU6-497P-201ENST00000365316 104 ntBASIC4.46□□□□□ -1.7
TRIM47Q96LD4 RNU6-1276P-201ENST00000365372 104 ntBASIC4.46□□□□□ -1.7
TRIM47Q96LD4 MIR518D-201ENST00000385014 87 ntBASIC4.46□□□□□ -1.7
TRIM47Q96LD4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TRIM47Q96LD4 RPL23AP48-201ENST00000406913 488 ntBASIC4.46□□□□□ -1.7
TRIM47Q96LD4 MIR1251-201ENST00000408552 70 ntBASIC4.46□□□□□ -1.7
TRIM47Q96LD4 AC079780.1-201ENST00000428259 207 ntBASIC4.46□□□□□ -1.7
TRIM47Q96LD4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM47Q96LD4 KC877373.1-201ENST00000479066 408 ntBASIC4.46□□□□□ -1.7
TRIM47Q96LD4 RNA5SP367-201ENST00000516557 118 ntBASIC4.46□□□□□ -1.7
TRIM47Q96LD4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM47Q96LD4 MIR5187-201ENST00000583479 76 ntBASIC4.46□□□□□ -1.7
TRIM47Q96LD4 AL591424.2-201ENST00000617023 128 ntBASIC4.46□□□□□ -1.7
TRIM47Q96LD4 U73479.1-201ENST00000618062 168 ntBASIC4.46□□□□□ -1.7
TRIM47Q96LD4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM47Q96LD4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM47Q96LD4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM47Q96LD4 AL356489.2-201ENST00000566968 3528 ntBASIC4.46□□□□□ -1.7
TRIM47Q96LD4 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.45□□□□□ -1.7
TRIM47Q96LD4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM47Q96LD4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM47Q96LD4 RNA5SP51-201ENST00000364750 119 ntBASIC4.45□□□□□ -1.7
TRIM47Q96LD4 U3.15-201ENST00000365398 212 ntBASIC4.45□□□□□ -1.7
TRIM47Q96LD4 Y_RNA.361-201ENST00000365515 120 ntBASIC4.45□□□□□ -1.7
TRIM47Q96LD4 RNU6-837P-201ENST00000391056 108 ntBASIC4.45□□□□□ -1.7
TRIM47Q96LD4 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.45□□□□□ -1.7
TRIM47Q96LD4 AL645939.1-201ENST00000453429 797 ntBASIC4.45□□□□□ -1.7
TRIM47Q96LD4 RN7SL271P-201ENST00000487601 295 ntBASIC4.45□□□□□ -1.7
TRIM47Q96LD4 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.45□□□□□ -1.7
TRIM47Q96LD4 RNU6-1299P-201ENST00000516316 100 ntBASIC4.45□□□□□ -1.7
TRIM47Q96LD4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.45□□□□□ -1.7
TRIM47Q96LD4 RNU6-1183P-201ENST00000517054 60 ntBASIC4.45□□□□□ -1.7
TRIM47Q96LD4 RN7SKP57-201ENST00000517248 293 ntBASIC4.45□□□□□ -1.7
TRIM47Q96LD4 MIR4727-201ENST00000622232 55 ntBASIC4.45□□□□□ -1.7
TRIM47Q96LD4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM47Q96LD4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM47Q96LD4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM47Q96LD4 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM47Q96LD4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
TRIM47Q96LD4 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
TRIM47Q96LD4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM47Q96LD4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM47Q96LD4 RNY1P1-201ENST00000364372 112 ntBASIC4.44□□□□□ -1.7
TRIM47Q96LD4 SNORD87-201ENST00000364849 89 ntBASIC4.44□□□□□ -1.7
TRIM47Q96LD4 RNU6-242P-201ENST00000384359 107 ntBASIC4.44□□□□□ -1.7
TRIM47Q96LD4 MIR490-201ENST00000384865 128 ntBASIC4.44□□□□□ -1.7
TRIM47Q96LD4 RN7SKP101-201ENST00000411376 320 ntBASIC4.44□□□□□ -1.7
TRIM47Q96LD4 AC005300.1-201ENST00000428401 373 ntBASIC4.44□□□□□ -1.7
TRIM47Q96LD4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM47Q96LD4 MTATP6P21-201ENST00000440681 189 ntBASIC4.44□□□□□ -1.7
TRIM47Q96LD4 AC115115.1-201ENST00000449927 248 ntBASIC4.44□□□□□ -1.7
TRIM47Q96LD4 RNU6-893P-201ENST00000458841 100 ntBASIC4.44□□□□□ -1.7
TRIM47Q96LD4 S100A11P1-201ENST00000477525 312 ntBASIC4.44□□□□□ -1.7
TRIM47Q96LD4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.44□□□□□ -1.7
TRIM47Q96LD4 COX6CP6-201ENST00000490840 228 ntBASIC4.44□□□□□ -1.7
TRIM47Q96LD4 RNU6-857P-201ENST00000515893 110 ntBASIC4.44□□□□□ -1.7
TRIM47Q96LD4 AC141557.1-201ENST00000540982 400 ntBASIC4.44□□□□□ -1.7
TRIM47Q96LD4 LINC00933-203ENST00000559812 219 ntBASIC4.44□□□□□ -1.7
TRIM47Q96LD4 AL138880.2-201ENST00000616214 239 ntBASIC4.44□□□□□ -1.7
TRIM47Q96LD4 U6.115-201ENST00000636045 103 ntBASIC4.44□□□□□ -1.7
TRIM47Q96LD4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TRIM47Q96LD4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
TRIM47Q96LD4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.44□□□□□ -1.7
TRIM47Q96LD4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TRIM47Q96LD4 RNA5SP502-201ENST00000362694 119 ntBASIC4.43□□□□□ -1.7
TRIM47Q96LD4 RNU6-787P-201ENST00000384032 107 ntBASIC4.43□□□□□ -1.7
TRIM47Q96LD4 SNORA70E-201ENST00000384492 135 ntBASIC4.43□□□□□ -1.7
TRIM47Q96LD4 MIR153-1-201ENST00000384914 90 ntBASIC4.43□□□□□ -1.7
TRIM47Q96LD4 SNORA48.2-201ENST00000390926 124 ntBASIC4.43□□□□□ -1.7
TRIM47Q96LD4 MIR891A-201ENST00000401237 79 ntBASIC4.43□□□□□ -1.7
TRIM47Q96LD4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.43□□□□□ -1.7
TRIM47Q96LD4 RPL26P9-201ENST00000457466 433 ntBASIC4.43□□□□□ -1.7
TRIM47Q96LD4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
TRIM47Q96LD4 SNORA70.12-201ENST00000516084 153 ntBASIC4.43□□□□□ -1.7
TRIM47Q96LD4 SNORA31.16-201ENST00000516773 139 ntBASIC4.43□□□□□ -1.7
TRIM47Q96LD4 RNU6-365P-201ENST00000517113 106 ntBASIC4.43□□□□□ -1.7
TRIM47Q96LD4 MIR5009-201ENST00000578736 100 ntBASIC4.43□□□□□ -1.7
TRIM47Q96LD4 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM47Q96LD4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM47Q96LD4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRIM47Q96LD4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
TRIM47Q96LD4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.42□□□□□ -1.7
TRIM47Q96LD4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM47Q96LD4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
TRIM47Q96LD4 DEFB108F-201ENST00000344638 222 ntBASIC4.42□□□□□ -1.7
TRIM47Q96LD4 MIR302B-201ENST00000362188 73 ntBASIC4.42□□□□□ -1.7
TRIM47Q96LD4 Y_RNA.78-201ENST00000362970 110 ntBASIC4.42□□□□□ -1.7
TRIM47Q96LD4 MIR124-3-201ENST00000384866 87 ntBASIC4.42□□□□□ -1.7
TRIM47Q96LD4 RNA5SP496-201ENST00000391240 109 ntBASIC4.42□□□□□ -1.7
TRIM47Q96LD4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM47Q96LD4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.42□□□□□ -1.7
TRIM47Q96LD4 RN7SL601P-201ENST00000471221 293 ntBASIC4.42□□□□□ -1.7
TRIM47Q96LD4 AC103975.1-201ENST00000482506 483 ntBASIC4.42□□□□□ -1.7
TRIM47Q96LD4 SNORA18.4-201ENST00000516440 124 ntBASIC4.42□□□□□ -1.7
TRIM47Q96LD4 RNU1-103P-201ENST00000516502 125 ntBASIC4.42□□□□□ -1.7
TRIM47Q96LD4 AL121603.1-201ENST00000553815 142 ntBASIC4.42□□□□□ -1.7
TRIM47Q96LD4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.42□□□□□ -1.7
TRIM47Q96LD4 MIR4513-201ENST00000581077 86 ntBASIC4.42□□□□□ -1.7
TRIM47Q96LD4 IGLL4P-201ENST00000614590 133 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms