Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC096920.1-201ENST00000423991 241 ntBASIC2.63□□□□□ -1.99
CTHRC1Q96CG8 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.63□□□□□ -1.99
CTHRC1Q96CG8 RPL30P4-201ENST00000429309 333 ntBASIC2.63□□□□□ -1.99
CTHRC1Q96CG8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.63□□□□□ -1.99
CTHRC1Q96CG8 AC074133.1-201ENST00000515696 183 ntBASIC2.63□□□□□ -1.99
CTHRC1Q96CG8 RNU6-408P-201ENST00000515910 100 ntBASIC2.63□□□□□ -1.99
CTHRC1Q96CG8 RNU2-44P-201ENST00000516795 194 ntBASIC2.63□□□□□ -1.99
CTHRC1Q96CG8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.63□□□□□ -1.99
CTHRC1Q96CG8 MIR5006-201ENST00000583027 110 ntBASIC2.63□□□□□ -1.99
CTHRC1Q96CG8 AL137790.1-201ENST00000634283 177 ntBASIC2.63□□□□□ -1.99
CTHRC1Q96CG8 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.63□□□□□ -1.99
CTHRC1Q96CG8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
CTHRC1Q96CG8 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CTHRC1Q96CG8 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CTHRC1Q96CG8 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 Y_RNA.288-201ENST00000364854 92 ntBASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 Y_RNA.462-201ENST00000384268 102 ntBASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 Y_RNA.498-201ENST00000384460 102 ntBASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 Y_RNA.597-201ENST00000410463 100 ntBASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 RNU6-1328P-201ENST00000410938 106 ntBASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 AL135938.1-201ENST00000443141 297 ntBASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 UQCRBP2-201ENST00000447827 297 ntBASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 AC003982.1-202ENST00000469928 248 ntBASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 CKS1BP2-201ENST00000497342 240 ntBASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 AC025465.3-201ENST00000510570 311 ntBASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 SNORA40.9-201ENST00000515895 93 ntBASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 RNU6-586P-201ENST00000517265 104 ntBASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 AC105245.1-201ENST00000581934 244 ntBASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 MZT1P2-201ENST00000604387 248 ntBASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.62□□□□□ -1.99
CTHRC1Q96CG8 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 AC138915.1-201ENST00000565427 1685 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 MIR26A1-201ENST00000362205 77 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 Y_RNA.26-201ENST00000362539 101 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 RNU6-626P-201ENST00000363354 107 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 Y_RNA.376-201ENST00000365638 108 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 SNORA18.2-201ENST00000383865 132 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 SNORD63-201ENST00000384262 68 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 RNU6-937P-201ENST00000384325 106 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 MIR181A2-201ENST00000384863 110 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 MIR181B1-201ENST00000385240 110 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 AL033519.2-201ENST00000403958 392 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 MIR1294-201ENST00000408503 142 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 CBX3P6-201ENST00000430257 527 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 AC080013.2-201ENST00000460866 323 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 AC091179.3-201ENST00000474761 144 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 RPS23P5-201ENST00000495419 428 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 RNU6-344P-201ENST00000516635 111 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 AC233702.2-202ENST00000562547 291 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 MIR3605-201ENST00000583214 100 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 AC062037.2-201ENST00000610137 73 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 AC107871.2-201ENST00000612894 502 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 AC080128.1-201ENST00000474389 1917 ntBASIC2.61□□□□□ -1.99
CTHRC1Q96CG8 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 Y_RNA.111-201ENST00000363248 100 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 Y_RNA.230-201ENST00000364348 109 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 Y_RNA.396-201ENST00000383949 103 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 RNU6-505P-201ENST00000384427 107 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 SNORA12-201ENST00000391162 147 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 RNU2-20P-201ENST00000410425 191 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 AL390729.2-201ENST00000416137 156 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 AC025750.2-201ENST00000442609 450 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 AC009237.7-201ENST00000447357 229 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 CYP2C59P-201ENST00000457790 269 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 TRBVB-201ENST00000477100 408 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 AC023141.11-201ENST00000508864 202 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 AC091826.1-201ENST00000514065 313 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 SNORA9.3-201ENST00000516383 129 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 RNU6-570P-201ENST00000517051 105 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 AC110588.1-201ENST00000559699 137 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 AC136932.1-201ENST00000574771 208 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 MIR4300-201ENST00000581016 96 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 MIR3616-201ENST00000584070 92 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 SNORD11B-201ENST00000607707 90 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 MIR7106-201ENST00000612419 65 ntBASIC2.6□□□□□ -1.99
CTHRC1Q96CG8 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 199.6 ms