Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNU6-308P-201ENST00000390957 107 ntBASIC2.99□□□□□ -1.93
CHMP4CQ96CF2 RNU6-159P-201ENST00000391080 106 ntBASIC2.99□□□□□ -1.93
CHMP4CQ96CF2 RNU1-139P-201ENST00000391307 165 ntBASIC2.99□□□□□ -1.93
CHMP4CQ96CF2 AC018865.2-201ENST00000423631 129 ntBASIC2.99□□□□□ -1.93
CHMP4CQ96CF2 WARS2P1-201ENST00000429678 537 ntBASIC2.99□□□□□ -1.93
CHMP4CQ96CF2 MIR449C-201ENST00000516047 92 ntBASIC2.99□□□□□ -1.93
CHMP4CQ96CF2 RNU5F-4P-201ENST00000516581 114 ntBASIC2.99□□□□□ -1.93
CHMP4CQ96CF2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.99□□□□□ -1.93
CHMP4CQ96CF2 UBL5P4-201ENST00000562584 236 ntBASIC2.99□□□□□ -1.93
CHMP4CQ96CF2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.99□□□□□ -1.93
CHMP4CQ96CF2 TCL6_2.1-201ENST00000615162 119 ntBASIC2.99□□□□□ -1.93
CHMP4CQ96CF2 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.99□□□□□ -1.93
CHMP4CQ96CF2 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.98□□□□□ -1.93
CHMP4CQ96CF2 RNU6-873P-201ENST00000363833 107 ntBASIC2.98□□□□□ -1.93
CHMP4CQ96CF2 RNU4-42P-201ENST00000364738 142 ntBASIC2.98□□□□□ -1.93
CHMP4CQ96CF2 RNU6-245P-201ENST00000384020 107 ntBASIC2.98□□□□□ -1.93
CHMP4CQ96CF2 RNU6-301P-201ENST00000384277 107 ntBASIC2.98□□□□□ -1.93
CHMP4CQ96CF2 Y_RNA.592-201ENST00000410274 109 ntBASIC2.98□□□□□ -1.93
CHMP4CQ96CF2 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.98□□□□□ -1.93
CHMP4CQ96CF2 AC004386.2-201ENST00000441858 148 ntBASIC2.98□□□□□ -1.93
CHMP4CQ96CF2 AC107032.1-201ENST00000485945 480 ntBASIC2.98□□□□□ -1.93
CHMP4CQ96CF2 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.98□□□□□ -1.93
CHMP4CQ96CF2 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.98□□□□□ -1.93
CHMP4CQ96CF2 SNORA25.14-201ENST00000516481 132 ntBASIC2.98□□□□□ -1.93
CHMP4CQ96CF2 RN7SKP295-201ENST00000517264 153 ntBASIC2.98□□□□□ -1.93
CHMP4CQ96CF2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.98□□□□□ -1.93
CHMP4CQ96CF2 MIR5006-201ENST00000583027 110 ntBASIC2.98□□□□□ -1.93
CHMP4CQ96CF2 AC005296.1-201ENST00000616145 209 ntBASIC2.98□□□□□ -1.93
CHMP4CQ96CF2 AC087588.2-201ENST00000617667 426 ntBASIC2.98□□□□□ -1.93
CHMP4CQ96CF2 AL138825.1-201ENST00000618587 192 ntBASIC2.98□□□□□ -1.93
CHMP4CQ96CF2 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 RNY3P11-201ENST00000364153 102 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 RNU6-234P-201ENST00000365229 104 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 RNU6-1227P-201ENST00000383981 107 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 Y_RNA.496-201ENST00000384444 101 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 Y_RNA.557-201ENST00000384680 107 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 RNU6-1072P-201ENST00000384703 107 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 RNU6-443P-201ENST00000384780 107 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 MIR10B-201ENST00000385011 110 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 MIR27B-201ENST00000385129 97 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 MTCO3P8-201ENST00000453691 755 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 RPS23P5-201ENST00000495419 428 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 RNU2-44P-201ENST00000516795 194 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 MIR2355-201ENST00000517199 87 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 AC022868.1-201ENST00000517767 391 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 RNU6-988P-201ENST00000519081 107 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 AL356055.1-201ENST00000602528 446 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 AL137847.3-201ENST00000611521 109 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 AC083806.3-201ENST00000614016 455 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 AC091925.1-201ENST00000623204 462 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 ZNF271P-202ENST00000465539 1970 ntBASIC2.97□□□□□ -1.93
CHMP4CQ96CF2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CHMP4CQ96CF2 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CHMP4CQ96CF2 RNU6-743P-201ENST00000364151 106 ntBASIC2.96□□□□□ -1.94
CHMP4CQ96CF2 RNY1P14-201ENST00000384426 108 ntBASIC2.96□□□□□ -1.94
CHMP4CQ96CF2 RNA5SP508-201ENST00000411327 119 ntBASIC2.96□□□□□ -1.94
CHMP4CQ96CF2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.96□□□□□ -1.94
CHMP4CQ96CF2 AC006600.1-201ENST00000572529 153 ntBASIC2.96□□□□□ -1.94
CHMP4CQ96CF2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.96□□□□□ -1.94
CHMP4CQ96CF2 MIR3171-201ENST00000584270 74 ntBASIC2.96□□□□□ -1.94
CHMP4CQ96CF2 MIR4298-201ENST00000584380 73 ntBASIC2.96□□□□□ -1.94
CHMP4CQ96CF2 MIR4719-201ENST00000585233 84 ntBASIC2.96□□□□□ -1.94
CHMP4CQ96CF2 SNRPGP17-201ENST00000603780 214 ntBASIC2.96□□□□□ -1.94
CHMP4CQ96CF2 U2.1-201ENST00000618978 145 ntBASIC2.96□□□□□ -1.94
CHMP4CQ96CF2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 Y_RNA.31-201ENST00000362574 102 ntBASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 RNA5SP393-201ENST00000363423 117 ntBASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 RNU6-879P-201ENST00000364328 108 ntBASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 SNORA25B-201ENST00000365507 128 ntBASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 RNU6-1026P-201ENST00000384465 108 ntBASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 MCFD2P1-201ENST00000417812 300 ntBASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 AC096644.2-201ENST00000429278 159 ntBASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 AC096638.1-201ENST00000444678 216 ntBASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 AL513328.1-201ENST00000446460 224 ntBASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 RNU6-667P-201ENST00000517186 102 ntBASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 RNU1-104P-201ENST00000517280 175 ntBASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 DEFB131C-201ENST00000528817 165 ntBASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 AC093023.1-201ENST00000547375 507 ntBASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 AC121758.2-201ENST00000553271 193 ntBASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 ANP32BP3-201ENST00000559213 706 ntBASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
CHMP4CQ96CF2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 Y_RNA.28-201ENST00000362554 111 ntBASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 RNU1-76P-201ENST00000362903 159 ntBASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 AL357139.1-201ENST00000407792 426 ntBASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 PMCHL1-202ENST00000423102 261 ntBASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 EIF1P2-201ENST00000428233 350 ntBASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.94□□□□□ -1.94
CHMP4CQ96CF2 RNU7-14P-201ENST00000459331 62 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms