Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.3□□□□□ -1.88
RTF1Q92541 AC005520.5-201ENST00000613926 164 ntBASIC3.3□□□□□ -1.88
RTF1Q92541 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.3□□□□□ -1.88
RTF1Q92541 U6.104-201ENST00000637979 90 ntBASIC3.3□□□□□ -1.88
RTF1Q92541 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.3□□□□□ -1.88
RTF1Q92541 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RTF1Q92541 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.29□□□□□ -1.88
RTF1Q92541 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.29□□□□□ -1.88
RTF1Q92541 RNU6-799P-201ENST00000363567 107 ntBASIC3.29□□□□□ -1.88
RTF1Q92541 Y_RNA.222-201ENST00000364264 102 ntBASIC3.29□□□□□ -1.88
RTF1Q92541 MIR518C-201ENST00000384822 101 ntBASIC3.29□□□□□ -1.88
RTF1Q92541 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.29□□□□□ -1.88
RTF1Q92541 AIMP1P2-201ENST00000425294 312 ntBASIC3.29□□□□□ -1.88
RTF1Q92541 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.29□□□□□ -1.88
RTF1Q92541 RPL39P40-201ENST00000445481 146 ntBASIC3.29□□□□□ -1.88
RTF1Q92541 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.29□□□□□ -1.88
RTF1Q92541 LINC01399-202ENST00000458450 244 ntBASIC3.29□□□□□ -1.88
RTF1Q92541 AC007215.1-201ENST00000464893 276 ntBASIC3.29□□□□□ -1.88
RTF1Q92541 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.29□□□□□ -1.88
RTF1Q92541 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.29□□□□□ -1.88
RTF1Q92541 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.29□□□□□ -1.88
RTF1Q92541 AC093023.1-201ENST00000547375 507 ntBASIC3.29□□□□□ -1.88
RTF1Q92541 AC079598.5-201ENST00000547460 117 ntBASIC3.29□□□□□ -1.88
RTF1Q92541 MIR4298-201ENST00000584380 73 ntBASIC3.29□□□□□ -1.88
RTF1Q92541 Y_RNA.772-201ENST00000606692 102 ntBASIC3.29□□□□□ -1.88
RTF1Q92541 AC005296.1-201ENST00000616145 209 ntBASIC3.29□□□□□ -1.88
RTF1Q92541 AC091564.4-201ENST00000533934 2194 ntBASIC3.29□□□□□ -1.88
RTF1Q92541 AL109809.4-201ENST00000603520 2185 ntBASIC3.29□□□□□ -1.88
RTF1Q92541 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTF1Q92541 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTF1Q92541 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
RTF1Q92541 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.28□□□□□ -1.88
RTF1Q92541 Y_RNA.40-201ENST00000362645 93 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 Y_RNA.64-201ENST00000362845 102 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 RNU5F-3P-201ENST00000363767 117 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 Y_RNA.188-201ENST00000363952 111 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 RNU6-879P-201ENST00000364328 108 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 Y_RNA.396-201ENST00000383949 103 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 RNU6-281P-201ENST00000384212 103 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 Y_RNA.461-201ENST00000384263 103 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 RNU6-318P-201ENST00000384283 103 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 RNU6-472P-201ENST00000384299 107 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 SNORA67.4-201ENST00000384688 142 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 MRPL35P1-201ENST00000404272 572 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 MIR1302-6-201ENST00000408466 90 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 RNU6-408P-201ENST00000515910 100 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 RN7SKP49-201ENST00000516675 260 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 AC109329.2-201ENST00000519658 482 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 MIR3923-201ENST00000579521 83 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 AL356575.1-201ENST00000603008 283 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 AC073410.2-201ENST00000603240 332 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 AL034555.1-201ENST00000604816 211 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 AC062037.2-201ENST00000610137 73 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.28□□□□□ -1.88
RTF1Q92541 AC240442.1-201ENST00000616055 283 ntBASIC3.28□□□□□ -1.88
RTF1Q92541 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.28□□□□□ -1.89
RTF1Q92541 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
RTF1Q92541 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
RTF1Q92541 Y_RNA.26-201ENST00000362539 101 ntBASIC3.27□□□□□ -1.89
RTF1Q92541 RNU6-280P-201ENST00000364145 104 ntBASIC3.27□□□□□ -1.89
RTF1Q92541 RNA5SP139-201ENST00000364340 117 ntBASIC3.27□□□□□ -1.89
RTF1Q92541 Y_RNA.288-201ENST00000364854 92 ntBASIC3.27□□□□□ -1.89
RTF1Q92541 RNU6-806P-201ENST00000365147 105 ntBASIC3.27□□□□□ -1.89
RTF1Q92541 RNU1-57P-201ENST00000384491 166 ntBASIC3.27□□□□□ -1.89
RTF1Q92541 MIR186-201ENST00000384988 86 ntBASIC3.27□□□□□ -1.89
RTF1Q92541 WARS2P1-201ENST00000429678 537 ntBASIC3.27□□□□□ -1.89
RTF1Q92541 RPS29P12-201ENST00000460178 152 ntBASIC3.27□□□□□ -1.89
RTF1Q92541 RN7SL429P-201ENST00000479090 223 ntBASIC3.27□□□□□ -1.89
RTF1Q92541 RN7SL489P-201ENST00000486185 223 ntBASIC3.27□□□□□ -1.89
RTF1Q92541 RN7SL327P-201ENST00000488659 223 ntBASIC3.27□□□□□ -1.89
RTF1Q92541 AP003733.2-201ENST00000529409 171 ntBASIC3.27□□□□□ -1.89
RTF1Q92541 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.27□□□□□ -1.89
RTF1Q92541 MIR4659A-201ENST00000580269 81 ntBASIC3.27□□□□□ -1.89
RTF1Q92541 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.27□□□□□ -1.89
RTF1Q92541 RN7SL853P-201ENST00000617250 223 ntBASIC3.27□□□□□ -1.89
RTF1Q92541 AC110079.1-202ENST00000635213 138 ntBASIC3.27□□□□□ -1.89
RTF1Q92541 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RTF1Q92541 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RTF1Q92541 Y_RNA.376-201ENST00000365638 108 ntBASIC3.26□□□□□ -1.89
RTF1Q92541 SNORD21-201ENST00000383953 95 ntBASIC3.26□□□□□ -1.89
RTF1Q92541 MIR487A-201ENST00000385009 80 ntBASIC3.26□□□□□ -1.89
RTF1Q92541 AC009414.1-201ENST00000427200 443 ntBASIC3.26□□□□□ -1.89
RTF1Q92541 CBX3P6-201ENST00000430257 527 ntBASIC3.26□□□□□ -1.89
RTF1Q92541 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.26□□□□□ -1.89
RTF1Q92541 AC104389.3-201ENST00000445629 235 ntBASIC3.26□□□□□ -1.89
RTF1Q92541 RPL36AP48-201ENST00000485521 314 ntBASIC3.26□□□□□ -1.89
RTF1Q92541 RNU2-53P-201ENST00000516257 147 ntBASIC3.26□□□□□ -1.89
RTF1Q92541 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.26□□□□□ -1.89
RTF1Q92541 UBL5P4-201ENST00000562584 236 ntBASIC3.26□□□□□ -1.89
RTF1Q92541 MIR5695-201ENST00000579717 85 ntBASIC3.26□□□□□ -1.89
RTF1Q92541 MIR5092-201ENST00000583139 88 ntBASIC3.26□□□□□ -1.89
RTF1Q92541 BX322639.1-202ENST00000423987 2213 ntBASIC3.25□□□□□ -1.89
RTF1Q92541 LINC02555-201ENST00000563933 1951 ntBASIC3.25□□□□□ -1.89
RTF1Q92541 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.25□□□□□ -1.89
RTF1Q92541 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RTF1Q92541 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
RTF1Q92541 RNU6-655P-201ENST00000362858 107 ntBASIC3.25□□□□□ -1.89
RTF1Q92541 RNU6-1210P-201ENST00000363775 107 ntBASIC3.25□□□□□ -1.89
RTF1Q92541 Y_RNA.518-201ENST00000384552 113 ntBASIC3.25□□□□□ -1.89
RTF1Q92541 SNORD115-46-201ENST00000390982 71 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 129.6 ms