Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AC018692.3-201ENST00000623929 123 ntBASIC6.13□□□□□ -1.43
TRIM41Q8WV44 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM41Q8WV44 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
TRIM41Q8WV44 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
TRIM41Q8WV44 FAM35BP-202ENST00000497389 3337 ntBASIC6.12□□□□□ -1.43
TRIM41Q8WV44 RNU6-622P-201ENST00000384272 103 ntBASIC6.12□□□□□ -1.43
TRIM41Q8WV44 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
TRIM41Q8WV44 DBIP2-201ENST00000419076 262 ntBASIC6.12□□□□□ -1.43
TRIM41Q8WV44 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC6.12□□□□□ -1.43
TRIM41Q8WV44 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC6.12□□□□□ -1.43
TRIM41Q8WV44 RNU1-41P-201ENST00000516161 162 ntBASIC6.12□□□□□ -1.43
TRIM41Q8WV44 RNU1-48P-201ENST00000516400 162 ntBASIC6.12□□□□□ -1.43
TRIM41Q8WV44 RN7SKP209-201ENST00000516888 304 ntBASIC6.12□□□□□ -1.43
TRIM41Q8WV44 MIR4724-201ENST00000579485 89 ntBASIC6.12□□□□□ -1.43
TRIM41Q8WV44 MIR3136-201ENST00000583498 78 ntBASIC6.12□□□□□ -1.43
TRIM41Q8WV44 SNORD11B-201ENST00000607707 90 ntBASIC6.12□□□□□ -1.43
TRIM41Q8WV44 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC6.12□□□□□ -1.43
TRIM41Q8WV44 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC6.12□□□□□ -1.43
TRIM41Q8WV44 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM41Q8WV44 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
TRIM41Q8WV44 RNY1P11-201ENST00000363759 113 ntBASIC6.11□□□□□ -1.43
TRIM41Q8WV44 Y_RNA.294-201ENST00000364916 102 ntBASIC6.11□□□□□ -1.43
TRIM41Q8WV44 AC027124.2-201ENST00000428249 105 ntBASIC6.11□□□□□ -1.43
TRIM41Q8WV44 HNRNPDLP4-201ENST00000605144 301 ntBASIC6.11□□□□□ -1.43
TRIM41Q8WV44 Z73965.1-201ENST00000623412 2297 ntBASIC6.11□□□□□ -1.43
TRIM41Q8WV44 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
TRIM41Q8WV44 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC6.11□□□□□ -1.43
TRIM41Q8WV44 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TRIM41Q8WV44 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM41Q8WV44 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
TRIM41Q8WV44 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM41Q8WV44 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC6.1□□□□□ -1.43
TRIM41Q8WV44 HMGN2P10-201ENST00000448085 265 ntBASIC6.1□□□□□ -1.43
TRIM41Q8WV44 AC027176.1-201ENST00000560204 514 ntBASIC6.1□□□□□ -1.43
TRIM41Q8WV44 AC025281.1-201ENST00000567026 265 ntBASIC6.1□□□□□ -1.43
TRIM41Q8WV44 MIR5004-201ENST00000579078 107 ntBASIC6.1□□□□□ -1.43
TRIM41Q8WV44 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC6.1□□□□□ -1.43
TRIM41Q8WV44 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TRIM41Q8WV44 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
TRIM41Q8WV44 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM41Q8WV44 Y_RNA.368-201ENST00000365547 113 ntBASIC6.09□□□□□ -1.43
TRIM41Q8WV44 Y_RNA.393-201ENST00000383936 102 ntBASIC6.09□□□□□ -1.43
TRIM41Q8WV44 RNU6-1228P-201ENST00000391014 107 ntBASIC6.09□□□□□ -1.43
TRIM41Q8WV44 AL714022.1-201ENST00000439897 151 ntBASIC6.09□□□□□ -1.43
TRIM41Q8WV44 RBMY2UP-201ENST00000453474 324 ntBASIC6.09□□□□□ -1.43
TRIM41Q8WV44 RNA5SP356-201ENST00000515972 94 ntBASIC6.09□□□□□ -1.43
TRIM41Q8WV44 RNU6-928P-201ENST00000516876 104 ntBASIC6.09□□□□□ -1.43
TRIM41Q8WV44 AC021739.1-201ENST00000559631 174 ntBASIC6.09□□□□□ -1.43
TRIM41Q8WV44 AL031274.2-201ENST00000599419 203 ntBASIC6.09□□□□□ -1.43
TRIM41Q8WV44 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM41Q8WV44 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
TRIM41Q8WV44 AC002543.1-201ENST00000299783 1954 ntBASIC6.09□□□□□ -1.43
TRIM41Q8WV44 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC6.08□□□□□ -1.44
TRIM41Q8WV44 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM41Q8WV44 AC090142.3-201ENST00000519012 385 ntBASIC6.08□□□□□ -1.44
TRIM41Q8WV44 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM41Q8WV44 AC105137.2-201ENST00000569073 466 ntBASIC6.08□□□□□ -1.44
TRIM41Q8WV44 MIR5006-201ENST00000583027 110 ntBASIC6.08□□□□□ -1.44
TRIM41Q8WV44 AC023043.3-201ENST00000593113 385 ntBASIC6.08□□□□□ -1.44
TRIM41Q8WV44 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM41Q8WV44 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM41Q8WV44 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM41Q8WV44 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM41Q8WV44 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
TRIM41Q8WV44 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM41Q8WV44 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM41Q8WV44 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM41Q8WV44 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM41Q8WV44 RNU4-35P-201ENST00000362588 141 ntBASIC6.07□□□□□ -1.44
TRIM41Q8WV44 SNORA7.2-201ENST00000364446 145 ntBASIC6.07□□□□□ -1.44
TRIM41Q8WV44 Y_RNA.456-201ENST00000384232 111 ntBASIC6.07□□□□□ -1.44
TRIM41Q8WV44 HSPE1P21-201ENST00000438283 308 ntBASIC6.07□□□□□ -1.44
TRIM41Q8WV44 KRTAP19-11P-201ENST00000439851 104 ntBASIC6.07□□□□□ -1.44
TRIM41Q8WV44 AC004386.2-201ENST00000441858 148 ntBASIC6.07□□□□□ -1.44
TRIM41Q8WV44 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM41Q8WV44 RNU5F-2P-201ENST00000516066 82 ntBASIC6.07□□□□□ -1.44
TRIM41Q8WV44 Y_RNA.712-201ENST00000517011 92 ntBASIC6.07□□□□□ -1.44
TRIM41Q8WV44 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM41Q8WV44 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM41Q8WV44 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC6.06□□□□□ -1.44
TRIM41Q8WV44 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TRIM41Q8WV44 RNU6-600P-201ENST00000362524 99 ntBASIC6.06□□□□□ -1.44
TRIM41Q8WV44 RNU6-147P-201ENST00000383983 107 ntBASIC6.06□□□□□ -1.44
TRIM41Q8WV44 SNORA75.5-201ENST00000391291 81 ntBASIC6.06□□□□□ -1.44
TRIM41Q8WV44 AL133475.1-201ENST00000404414 305 ntBASIC6.06□□□□□ -1.44
TRIM41Q8WV44 RNU6-383P-201ENST00000410864 94 ntBASIC6.06□□□□□ -1.44
TRIM41Q8WV44 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TRIM41Q8WV44 AL034555.1-201ENST00000604816 211 ntBASIC6.06□□□□□ -1.44
TRIM41Q8WV44 AC005520.5-201ENST00000613926 164 ntBASIC6.06□□□□□ -1.44
TRIM41Q8WV44 AC005562.2-201ENST00000618264 111 ntBASIC6.06□□□□□ -1.44
TRIM41Q8WV44 AC068205.3-201ENST00000636385 468 ntBASIC6.06□□□□□ -1.44
TRIM41Q8WV44 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM41Q8WV44 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
TRIM41Q8WV44 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
TRIM41Q8WV44 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
TRIM41Q8WV44 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
TRIM41Q8WV44 AC022336.2-201ENST00000568966 2538 ntBASIC6.05□□□□□ -1.44
TRIM41Q8WV44 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
TRIM41Q8WV44 AC080128.1-201ENST00000474389 1917 ntBASIC6.05□□□□□ -1.44
TRIM41Q8WV44 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms