Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.22□□□□□ -2.21
SHROOM3Q8TF72 PTP4A1P4-201ENST00000512479 322 ntBASIC1.22□□□□□ -2.21
SHROOM3Q8TF72 RNU6-113P-201ENST00000516653 101 ntBASIC1.22□□□□□ -2.21
SHROOM3Q8TF72 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.22□□□□□ -2.21
SHROOM3Q8TF72 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.22□□□□□ -2.21
SHROOM3Q8TF72 CBX3P7-201ENST00000532876 502 ntBASIC1.22□□□□□ -2.21
SHROOM3Q8TF72 AC079598.5-201ENST00000547460 117 ntBASIC1.22□□□□□ -2.21
SHROOM3Q8TF72 RPL30P11-203ENST00000598995 310 ntBASIC1.22□□□□□ -2.21
SHROOM3Q8TF72 VN1R107P-201ENST00000601784 209 ntBASIC1.22□□□□□ -2.21
SHROOM3Q8TF72 RMST_7.1-201ENST00000621935 268 ntBASIC1.22□□□□□ -2.21
SHROOM3Q8TF72 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 RNU6-212P-201ENST00000362642 104 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 RNU6-1285P-201ENST00000363480 105 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 RNU6-487P-201ENST00000365430 104 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 RNU6-438P-201ENST00000365561 103 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 RNU6-214P-201ENST00000384130 107 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 RPS29P13-201ENST00000402041 169 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AL161788.1-201ENST00000441805 169 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AL359672.1-201ENST00000442302 409 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AC130509.1-201ENST00000464158 433 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 RPS29P25-201ENST00000481709 171 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 MTCO2P30-201ENST00000503662 364 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AC011352.1-201ENST00000512300 793 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 RNU6-1088P-201ENST00000516850 104 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AC109479.2-201ENST00000517842 174 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AL031274.2-201ENST00000599419 203 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AP000907.4-201ENST00000604143 237 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AC073413.2-201ENST00000604332 360 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 RNU6-655P-201ENST00000362858 107 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 RNU6-1252P-201ENST00000363054 104 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 RNU6-254P-201ENST00000363377 107 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 Y_RNA.373-201ENST00000365600 103 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 MIR186-201ENST00000384988 86 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 RNA5SP219-201ENST00000390940 113 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 MIR450B-201ENST00000401182 78 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AL033519.2-201ENST00000403958 392 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 MIR1277-201ENST00000408536 78 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 RNU6-955P-201ENST00000410497 104 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 EBAG9P1-201ENST00000418955 543 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 MRPS10P2-201ENST00000431226 381 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 RPL30P1-201ENST00000488676 339 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AC082651.2-201ENST00000496833 166 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 RNU7-30P-201ENST00000516835 62 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 IMMP1LP2-201ENST00000552954 492 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 AL161423.1-201ENST00000613700 262 ntBASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.21□□□□□ -2.22
SHROOM3Q8TF72 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 MTND4P5-201ENST00000435821 1374 ntBASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 AP000560.1-201ENST00000624150 1937 ntBASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 RNU6-1286P-201ENST00000383871 107 ntBASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 Y_RNA.458-201ENST00000384240 102 ntBASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 MIR29B2-201ENST00000385055 81 ntBASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 RNU6-510P-201ENST00000391239 108 ntBASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 SNRPEP10-201ENST00000420249 274 ntBASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 EIF1P1-201ENST00000421436 341 ntBASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 AL590556.1-201ENST00000423231 483 ntBASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 RNU2-19P-201ENST00000517288 84 ntBASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 MIR3136-201ENST00000583498 78 ntBASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 AC078899.2-201ENST00000595282 212 ntBASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 AC078795.3-201ENST00000602913 472 ntBASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 AC092794.1-201ENST00000612734 582 ntBASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
SHROOM3Q8TF72 AC092268.1-201ENST00000342691 405 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 Y_RNA.390-201ENST00000383932 102 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 RNU6-26P-201ENST00000383985 107 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 RNU6-142P-201ENST00000384019 107 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 Y_RNA.473-201ENST00000384333 102 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 SNORA26.3-201ENST00000391119 136 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 AL357139.1-201ENST00000407792 426 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 AL353689.1-201ENST00000438895 199 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 DAP3P1-201ENST00000441522 278 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 HMGN2P26-201ENST00000463169 339 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 HMGB1P35-201ENST00000503360 598 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 AC091885.1-201ENST00000506658 268 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 RNU6-835P-201ENST00000516974 104 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 AP000763.2-201ENST00000540641 163 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 AC084364.2-201ENST00000546924 395 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 SUB1P4-201ENST00000566062 339 ntBASIC1.19□□□□□ -2.22
SHROOM3Q8TF72 MIR3942-201ENST00000585264 109 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 160.5 ms