Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 SNRPEP9-201ENST00000436794 238 ntBASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 AC091179.1-201ENST00000461606 579 ntBASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 AC010401.1-201ENST00000463867 348 ntBASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 RPS27P26-201ENST00000494583 239 ntBASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 AC005840.1-201ENST00000498412 377 ntBASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 PDCD5P2-201ENST00000507570 312 ntBASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 RNU6-1183P-201ENST00000517054 60 ntBASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 AC018448.1-201ENST00000552843 316 ntBASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 AC024153.1-201ENST00000603103 365 ntBASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 MIR622-201ENST00000638396 96 ntBASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 AC093010.3-201ENST00000570269 15214 ntBASIC3.24□□□□□ -1.89
TTC9BQ8N6N2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 RNU6-1298P-201ENST00000362456 101 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 RNU6-727P-201ENST00000363592 107 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 SNORA71.1-201ENST00000364523 117 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 Y_RNA.420-201ENST00000384043 110 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 Y_RNA.542-201ENST00000384641 111 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 MIR544A-201ENST00000384855 91 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 MIR184-201ENST00000384962 84 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 SNORA40.19-201ENST00000390846 128 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 RNU6-763P-201ENST00000390865 106 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 NDUFB4P7-201ENST00000423198 363 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 RPL37P4-201ENST00000448908 268 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 HMGN1P18-201ENST00000457642 277 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 Y_RNA.637-201ENST00000459424 114 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 AL138963.2-201ENST00000605137 226 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 AL110115.1-201ENST00000614396 364 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 AC024581.2-201ENST00000619986 252 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 AL365361.1-201ENST00000566942 3481 ntBASIC3.23□□□□□ -1.89
TTC9BQ8N6N2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 MTND5P35-201ENST00000557537 1720 ntBASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 MIR22-201ENST00000362190 85 ntBASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 RNU6-942P-201ENST00000363002 107 ntBASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 Y_RNA.121-201ENST00000363309 113 ntBASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 RNU6-1285P-201ENST00000363480 105 ntBASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 Y_RNA.498-201ENST00000384460 102 ntBASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 Y_RNA.525-201ENST00000384570 113 ntBASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 EI24P2-201ENST00000397776 1076 ntBASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 RNU6-1199P-201ENST00000411249 104 ntBASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 EEF1B2P7-201ENST00000451177 676 ntBASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 AP000705.1-201ENST00000454567 350 ntBASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 AC100767.1-201ENST00000528178 123 ntBASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 AC022616.8-201ENST00000533569 253 ntBASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 MIR4474-201ENST00000579189 78 ntBASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 MIR4298-201ENST00000584380 73 ntBASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 AC136601.2-201ENST00000604356 474 ntBASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 AC093732.2-201ENST00000607950 274 ntBASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 AC069294.1-201ENST00000608397 350 ntBASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TTC9BQ8N6N2 AC068700.1-201ENST00000565862 3754 ntBASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 RNU6-199P-201ENST00000362954 107 ntBASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 Y_RNA.329-201ENST00000365209 107 ntBASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 Y_RNA.572-201ENST00000384757 98 ntBASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 RNU6-381P-201ENST00000391259 108 ntBASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 RPL23AP95-201ENST00000426806 265 ntBASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 AL139132.1-201ENST00000431587 344 ntBASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 RNU4-57P-201ENST00000515980 135 ntBASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 TRAV28-201ENST00000557548 323 ntBASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 MIR3921-201ENST00000577308 85 ntBASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 AP002826.1-201ENST00000608835 315 ntBASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 RMST_8.1-201ENST00000610287 165 ntBASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
TTC9BQ8N6N2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 AC134026.1-201ENST00000623249 2239 ntBASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 RNU6-324P-201ENST00000363957 106 ntBASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 MIR518D-201ENST00000385014 87 ntBASIC3.2□□□□□ -1.9
TTC9BQ8N6N2 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms