Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AL035470.1-201ENST00000622571 220 ntBASIC4.4□□□□□ -1.71
SCUBE3Q8IX30 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
SCUBE3Q8IX30 MIR2052-201ENST00000636055 55 ntBASIC4.4□□□□□ -1.71
SCUBE3Q8IX30 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.4□□□□□ -1.71
SCUBE3Q8IX30 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
SCUBE3Q8IX30 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SCUBE3Q8IX30 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SCUBE3Q8IX30 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SCUBE3Q8IX30 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SCUBE3Q8IX30 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 SPRR2C-201ENST00000290702 219 ntBASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 RNA5SP502-201ENST00000362694 119 ntBASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 Y_RNA.66-201ENST00000362862 102 ntBASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 Y_RNA.796-201ENST00000364268 102 ntBASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 Y_RNA.799-201ENST00000364992 102 ntBASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 RNU6-117P-201ENST00000365415 107 ntBASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 RNU6-1152P-201ENST00000384576 107 ntBASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 MIR562-201ENST00000384894 95 ntBASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 PTMAP2-201ENST00000397627 327 ntBASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 AC245291.1-201ENST00000419501 328 ntBASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 AC063976.3-201ENST00000426849 329 ntBASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 HLA-N-201ENST00000437516 135 ntBASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 AC245102.2-201ENST00000448956 180 ntBASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 RNU6-1146P-201ENST00000516282 102 ntBASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 RNU6-504P-201ENST00000516568 104 ntBASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 CYP4A43P-201ENST00000568156 121 ntBASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 MIR4753-201ENST00000585119 83 ntBASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SCUBE3Q8IX30 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 RNU6-1209P-201ENST00000363655 107 ntBASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 SNORD46.1-201ENST00000364139 104 ntBASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 SNORD32B-201ENST00000364460 84 ntBASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 RNU6-1292P-201ENST00000383856 107 ntBASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 MIR590-201ENST00000385008 97 ntBASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 SNORD78.1-201ENST00000390866 65 ntBASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 RNA5SP354-201ENST00000391247 136 ntBASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 RNA5SP146-201ENST00000410743 123 ntBASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 RNU2-32P-201ENST00000411193 191 ntBASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 snoU13.28-201ENST00000459235 104 ntBASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 AC005921.1-201ENST00000510589 286 ntBASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 RNU6ATAC17P-201ENST00000516074 71 ntBASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 AC022655.2-201ENST00000577280 318 ntBASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 MIR432-201ENST00000606207 94 ntBASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 AC107294.3-201ENST00000609211 526 ntBASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 Y_RNA.818-201ENST00000618813 71 ntBASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 AC025521.1-201ENST00000621624 286 ntBASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 AC006435.5-201ENST00000624486 112 ntBASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SCUBE3Q8IX30 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCUBE3Q8IX30 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SCUBE3Q8IX30 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SCUBE3Q8IX30 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.37□□□□□ -1.71
SCUBE3Q8IX30 AC058791.1-201ENST00000608412 3198 ntBASIC4.37□□□□□ -1.71
SCUBE3Q8IX30 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.37□□□□□ -1.71
SCUBE3Q8IX30 RNY4P6-201ENST00000363667 96 ntBASIC4.37□□□□□ -1.71
SCUBE3Q8IX30 RNA5SP189-201ENST00000364920 115 ntBASIC4.37□□□□□ -1.71
SCUBE3Q8IX30 Y_RNA.333-201ENST00000365274 102 ntBASIC4.37□□□□□ -1.71
SCUBE3Q8IX30 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.37□□□□□ -1.71
SCUBE3Q8IX30 RPL23AP46-201ENST00000438548 490 ntBASIC4.37□□□□□ -1.71
SCUBE3Q8IX30 AC006011.1-201ENST00000442758 349 ntBASIC4.37□□□□□ -1.71
SCUBE3Q8IX30 RNA5SP246-201ENST00000458909 119 ntBASIC4.37□□□□□ -1.71
SCUBE3Q8IX30 AC008155.2-201ENST00000464337 397 ntBASIC4.37□□□□□ -1.71
SCUBE3Q8IX30 RNU1-45P-201ENST00000517191 141 ntBASIC4.37□□□□□ -1.71
SCUBE3Q8IX30 5S_rRNA.11-201ENST00000618635 84 ntBASIC4.37□□□□□ -1.71
SCUBE3Q8IX30 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCUBE3Q8IX30 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SCUBE3Q8IX30 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.37□□□□□ -1.71
SCUBE3Q8IX30 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 Y_RNA.219-201ENST00000364232 113 ntBASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 Y_RNA.366-201ENST00000365540 102 ntBASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 SNORA1-201ENST00000384107 130 ntBASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 RNU6-975P-201ENST00000384296 105 ntBASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 MIR181B1-201ENST00000385240 110 ntBASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 RNU6-57P-201ENST00000411348 103 ntBASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 MTATP8P2-201ENST00000435212 202 ntBASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 AC018634.1-201ENST00000437554 401 ntBASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 RNU7-14P-201ENST00000459331 62 ntBASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 AC112771.1-201ENST00000463581 102 ntBASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 SCARNA13-201ENST00000516672 275 ntBASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 RNU6-158P-201ENST00000517104 100 ntBASIC4.36□□□□□ -1.71
SCUBE3Q8IX30 MIR5009-201ENST00000578736 100 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms