Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF111Q6ZNA4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF111Q6ZNA4 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RNF111Q6ZNA4 SNORD56.3-201ENST00000363507 71 ntBASIC3.36□□□□□ -1.87
RNF111Q6ZNA4 snoU2_19.4-201ENST00000364329 80 ntBASIC3.36□□□□□ -1.87
RNF111Q6ZNA4 Y_RNA.243-201ENST00000364481 109 ntBASIC3.36□□□□□ -1.87
RNF111Q6ZNA4 SNORD6-201ENST00000365444 73 ntBASIC3.36□□□□□ -1.87
RNF111Q6ZNA4 RNU1-57P-201ENST00000384491 166 ntBASIC3.36□□□□□ -1.87
RNF111Q6ZNA4 RNU6-855P-201ENST00000410395 104 ntBASIC3.36□□□□□ -1.87
RNF111Q6ZNA4 CR769767.1-201ENST00000436337 346 ntBASIC3.36□□□□□ -1.87
RNF111Q6ZNA4 RPL36AP48-201ENST00000485521 314 ntBASIC3.36□□□□□ -1.87
RNF111Q6ZNA4 AC104619.4-201ENST00000510773 249 ntBASIC3.36□□□□□ -1.87
RNF111Q6ZNA4 SNORA64.4-201ENST00000516632 81 ntBASIC3.36□□□□□ -1.87
RNF111Q6ZNA4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF111Q6ZNA4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.36□□□□□ -1.87
RNF111Q6ZNA4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RNF111Q6ZNA4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RNF111Q6ZNA4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.36□□□□□ -1.87
RNF111Q6ZNA4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 MFSD8-236ENST00000641509 4050 ntBASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 AL355596.1-201ENST00000565399 3996 ntBASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 SNORD9-201ENST00000362566 104 ntBASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 SNORA72.4-201ENST00000384174 132 ntBASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 Y_RNA.572-201ENST00000384757 98 ntBASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 MIR200C-201ENST00000384980 68 ntBASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 RNU6-239P-201ENST00000390990 99 ntBASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 SNORA48.7-201ENST00000391302 135 ntBASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 AL357552.1-201ENST00000445254 415 ntBASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 RN7SKP164-201ENST00000516138 266 ntBASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 RNU6-62P-201ENST00000516526 102 ntBASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 MIR4744-201ENST00000581563 82 ntBASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 AC090616.3-201ENST00000582184 217 ntBASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 MIR3158-1-201ENST00000583596 81 ntBASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 AC012531.5-201ENST00000611375 151 ntBASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 AP003355.3-201ENST00000623465 114 ntBASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 U6.115-201ENST00000636045 103 ntBASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 AC012442.3-202ENST00000636742 206 ntBASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.35□□□□□ -1.87
RNF111Q6ZNA4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 AC100821.1-201ENST00000523153 2479 ntBASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 RNU6-1290P-201ENST00000362957 109 ntBASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 SNORA67.2-201ENST00000384300 149 ntBASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 SNORA8.3-201ENST00000384679 139 ntBASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 MIR569-201ENST00000385228 96 ntBASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 MIR548B-201ENST00000385247 97 ntBASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 RNU6-578P-201ENST00000390980 103 ntBASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 RNU6-1154P-201ENST00000391001 104 ntBASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 Y_RNA.586-201ENST00000391146 98 ntBASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 RNU6-710P-201ENST00000410424 105 ntBASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 EBAG9P1-201ENST00000418955 543 ntBASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 HMGN1P18-201ENST00000457642 277 ntBASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 RPL21P129-201ENST00000491732 478 ntBASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 SNORA67.7-201ENST00000516664 135 ntBASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.34□□□□□ -1.87
RNF111Q6ZNA4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
RNF111Q6ZNA4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 Y_RNA.24-201ENST00000362508 103 ntBASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 U3.8-201ENST00000363675 217 ntBASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 RNU6-1305P-201ENST00000364353 104 ntBASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 Y_RNA.341-201ENST00000365341 102 ntBASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 MIR626-201ENST00000385032 94 ntBASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 AL365496.1-201ENST00000426885 215 ntBASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 HMGN2P31-201ENST00000432430 273 ntBASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 GOT2P5-201ENST00000433995 546 ntBASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 RPL23AP62-201ENST00000463396 453 ntBASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 RNU1-143P-201ENST00000516296 146 ntBASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 SNORA31.21-201ENST00000517180 77 ntBASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 AC026241.1-201ENST00000517873 2142 ntBASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 AC026403.1-201ENST00000518938 295 ntBASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 MIR3684-201ENST00000579779 74 ntBASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 U1.23-201ENST00000610293 146 ntBASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 RNU1-68P-201ENST00000615382 146 ntBASIC3.33□□□□□ -1.88
RNF111Q6ZNA4 U1.39-201ENST00000621562 146 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms