Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.81□□□□□ -2.12
CASC4Q6P4E1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CASC4Q6P4E1 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.81□□□□□ -2.12
CASC4Q6P4E1 MIR1283-1-201ENST00000408494 87 ntBASIC1.81□□□□□ -2.12
CASC4Q6P4E1 Z82188.1-201ENST00000436709 154 ntBASIC1.81□□□□□ -2.12
CASC4Q6P4E1 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.81□□□□□ -2.12
CASC4Q6P4E1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.81□□□□□ -2.12
CASC4Q6P4E1 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.81□□□□□ -2.12
CASC4Q6P4E1 AC097473.1-201ENST00000508142 408 ntBASIC1.81□□□□□ -2.12
CASC4Q6P4E1 AC107393.1-201ENST00000512403 346 ntBASIC1.81□□□□□ -2.12
CASC4Q6P4E1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.81□□□□□ -2.12
CASC4Q6P4E1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.81□□□□□ -2.12
CASC4Q6P4E1 MIR4713-201ENST00000582691 75 ntBASIC1.81□□□□□ -2.12
CASC4Q6P4E1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.81□□□□□ -2.12
CASC4Q6P4E1 AC068790.6-201ENST00000602558 258 ntBASIC1.81□□□□□ -2.12
CASC4Q6P4E1 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.81□□□□□ -2.12
CASC4Q6P4E1 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.81□□□□□ -2.12
CASC4Q6P4E1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CASC4Q6P4E1 MTND5P9-201ENST00000503854 1755 ntBASIC1.8□□□□□ -2.12
CASC4Q6P4E1 Y_RNA.132-201ENST00000363421 102 ntBASIC1.8□□□□□ -2.12
CASC4Q6P4E1 RNU6-418P-201ENST00000384035 107 ntBASIC1.8□□□□□ -2.12
CASC4Q6P4E1 MIR300-201ENST00000401138 83 ntBASIC1.8□□□□□ -2.12
CASC4Q6P4E1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CASC4Q6P4E1 MTCO3P46-201ENST00000425787 232 ntBASIC1.8□□□□□ -2.12
CASC4Q6P4E1 MTND1P4-201ENST00000435196 415 ntBASIC1.8□□□□□ -2.12
CASC4Q6P4E1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.8□□□□□ -2.12
CASC4Q6P4E1 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.8□□□□□ -2.12
CASC4Q6P4E1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.8□□□□□ -2.12
CASC4Q6P4E1 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.8□□□□□ -2.12
CASC4Q6P4E1 ACA59.1-201ENST00000515966 143 ntBASIC1.8□□□□□ -2.12
CASC4Q6P4E1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.8□□□□□ -2.12
CASC4Q6P4E1 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.8□□□□□ -2.12
CASC4Q6P4E1 AC110588.1-201ENST00000559699 137 ntBASIC1.8□□□□□ -2.12
CASC4Q6P4E1 SUB1P4-201ENST00000566062 339 ntBASIC1.8□□□□□ -2.12
CASC4Q6P4E1 SNORA59B-202ENST00000578183 701 ntBASIC1.8□□□□□ -2.12
CASC4Q6P4E1 AC083806.3-201ENST00000614016 455 ntBASIC1.8□□□□□ -2.12
CASC4Q6P4E1 AC007014.2-201ENST00000615581 479 ntBASIC1.8□□□□□ -2.12
CASC4Q6P4E1 AC137590.2-201ENST00000619709 240 ntBASIC1.8□□□□□ -2.12
CASC4Q6P4E1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.8□□□□□ -2.12
CASC4Q6P4E1 AL159152.1-201ENST00000635019 2587 ntBASIC1.8□□□□□ -2.12
CASC4Q6P4E1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.8□□□□□ -2.12
CASC4Q6P4E1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CASC4Q6P4E1 MTND4LP16-201ENST00000440828 295 ntBASIC1.79□□□□□ -2.12
CASC4Q6P4E1 AL357134.1-201ENST00000445848 426 ntBASIC1.79□□□□□ -2.12
CASC4Q6P4E1 AC009237.7-201ENST00000447357 229 ntBASIC1.79□□□□□ -2.12
CASC4Q6P4E1 AC010409.1-201ENST00000487382 476 ntBASIC1.79□□□□□ -2.12
CASC4Q6P4E1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.79□□□□□ -2.12
CASC4Q6P4E1 RNU4-49P-201ENST00000516080 140 ntBASIC1.79□□□□□ -2.12
CASC4Q6P4E1 RNA5SP454-201ENST00000517231 127 ntBASIC1.79□□□□□ -2.12
CASC4Q6P4E1 SUMO2P18-201ENST00000518873 252 ntBASIC1.79□□□□□ -2.12
CASC4Q6P4E1 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.79□□□□□ -2.12
CASC4Q6P4E1 MIR5094-201ENST00000578766 85 ntBASIC1.79□□□□□ -2.12
CASC4Q6P4E1 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.79□□□□□ -2.12
CASC4Q6P4E1 AC010900.2-201ENST00000604508 210 ntBASIC1.79□□□□□ -2.12
CASC4Q6P4E1 AC103810.8-201ENST00000607347 118 ntBASIC1.79□□□□□ -2.12
CASC4Q6P4E1 AC027514.1-201ENST00000588561 1603 ntBASIC1.79□□□□□ -2.12
CASC4Q6P4E1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CASC4Q6P4E1 ZNF204P-201ENST00000416749 2397 ntBASIC1.78□□□□□ -2.12
CASC4Q6P4E1 MTND4P5-201ENST00000435821 1374 ntBASIC1.78□□□□□ -2.12
CASC4Q6P4E1 RNU4-9P-201ENST00000364951 139 ntBASIC1.78□□□□□ -2.12
CASC4Q6P4E1 RNU6-1013P-201ENST00000384180 107 ntBASIC1.78□□□□□ -2.12
CASC4Q6P4E1 MIR32-201ENST00000384965 70 ntBASIC1.78□□□□□ -2.12
CASC4Q6P4E1 FCF1P9-201ENST00000412546 282 ntBASIC1.78□□□□□ -2.12
CASC4Q6P4E1 HMGB1P18-201ENST00000438801 619 ntBASIC1.78□□□□□ -2.12
CASC4Q6P4E1 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.78□□□□□ -2.12
CASC4Q6P4E1 MTND1P17-201ENST00000448961 204 ntBASIC1.78□□□□□ -2.12
CASC4Q6P4E1 UBL5P3-201ENST00000475112 231 ntBASIC1.78□□□□□ -2.12
CASC4Q6P4E1 FO393415.2-201ENST00000480085 343 ntBASIC1.78□□□□□ -2.12
CASC4Q6P4E1 RPS29P11-201ENST00000496507 171 ntBASIC1.78□□□□□ -2.12
CASC4Q6P4E1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.78□□□□□ -2.12
CASC4Q6P4E1 RNU6-566P-201ENST00000516790 107 ntBASIC1.78□□□□□ -2.12
CASC4Q6P4E1 RNU6-856P-201ENST00000516959 98 ntBASIC1.78□□□□□ -2.12
CASC4Q6P4E1 RRN3P3-201ENST00000549207 578 ntBASIC1.78□□□□□ -2.12
CASC4Q6P4E1 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.78□□□□□ -2.12
CASC4Q6P4E1 MIR4753-201ENST00000585119 83 ntBASIC1.78□□□□□ -2.12
CASC4Q6P4E1 AP003465.2-201ENST00000602571 373 ntBASIC1.78□□□□□ -2.12
CASC4Q6P4E1 SNRPGP20-201ENST00000604477 205 ntBASIC1.78□□□□□ -2.12
CASC4Q6P4E1 AC002553.4-201ENST00000616896 331 ntBASIC1.78□□□□□ -2.12
CASC4Q6P4E1 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.78□□□□□ -2.12
CASC4Q6P4E1 BX322639.1-202ENST00000423987 2213 ntBASIC1.78□□□□□ -2.13
CASC4Q6P4E1 Y_RNA.86-201ENST00000363020 111 ntBASIC1.77□□□□□ -2.13
CASC4Q6P4E1 Y_RNA.301-201ENST00000364990 103 ntBASIC1.77□□□□□ -2.13
CASC4Q6P4E1 MIR583-201ENST00000384846 75 ntBASIC1.77□□□□□ -2.13
CASC4Q6P4E1 SNORA40.18-201ENST00000391200 128 ntBASIC1.77□□□□□ -2.13
CASC4Q6P4E1 EIF1P1-201ENST00000421436 341 ntBASIC1.77□□□□□ -2.13
CASC4Q6P4E1 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.77□□□□□ -2.13
CASC4Q6P4E1 AC099677.2-201ENST00000436385 175 ntBASIC1.77□□□□□ -2.13
CASC4Q6P4E1 HSPE1P21-201ENST00000438283 308 ntBASIC1.77□□□□□ -2.13
CASC4Q6P4E1 MTATP6P13-201ENST00000438531 667 ntBASIC1.77□□□□□ -2.13
CASC4Q6P4E1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.77□□□□□ -2.13
CASC4Q6P4E1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.77□□□□□ -2.13
CASC4Q6P4E1 NFU1P2-201ENST00000448700 469 ntBASIC1.77□□□□□ -2.13
CASC4Q6P4E1 ATP5J2P3-201ENST00000451550 258 ntBASIC1.77□□□□□ -2.13
CASC4Q6P4E1 PPP1R2P5-201ENST00000457256 603 ntBASIC1.77□□□□□ -2.13
CASC4Q6P4E1 snoU13.15-201ENST00000459407 104 ntBASIC1.77□□□□□ -2.13
CASC4Q6P4E1 AC069439.1-201ENST00000494739 167 ntBASIC1.77□□□□□ -2.13
CASC4Q6P4E1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.77□□□□□ -2.13
CASC4Q6P4E1 AC067942.3-201ENST00000512025 362 ntBASIC1.77□□□□□ -2.13
CASC4Q6P4E1 GNAI2P1-201ENST00000541815 315 ntBASIC1.77□□□□□ -2.13
CASC4Q6P4E1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms