Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.46□□□□□ -2.18
NIPAL3Q6P499 MTND4P5-201ENST00000435821 1374 ntBASIC1.46□□□□□ -2.18
NIPAL3Q6P499 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
NIPAL3Q6P499 RNU6-483P-201ENST00000384088 108 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 RNU6-790P-201ENST00000384479 105 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 MIR549A-201ENST00000385268 96 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.45□□□□□ -2.18
NIPAL3Q6P499 AC060773.1-201ENST00000421698 310 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 MTCO3P29-201ENST00000432119 779 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 AL591806.2-201ENST00000433122 173 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 AC245047.4-201ENST00000433189 144 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 NDUFA5P4-201ENST00000436704 385 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.45□□□□□ -2.18
NIPAL3Q6P499 NFU1P2-201ENST00000448700 469 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 AC074290.1-201ENST00000448883 135 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 HSPE1P24-201ENST00000450782 238 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 MTCO3P8-201ENST00000453691 755 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 AF186996.7-201ENST00000492781 209 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 RNU6-970P-201ENST00000516312 107 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 RNA5SP384-201ENST00000516615 116 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 RNA5SP481-201ENST00000516814 122 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 Y_RNA.704-201ENST00000516851 102 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 AC084364.2-201ENST00000546924 395 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 MIR3976-201ENST00000606807 139 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 AL133215.3-201ENST00000609801 448 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 MIR7843-201ENST00000622274 79 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 BX322639.1-202ENST00000423987 2213 ntBASIC1.45□□□□□ -2.18
NIPAL3Q6P499 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
NIPAL3Q6P499 RNU6-254P-201ENST00000363377 107 ntBASIC1.44□□□□□ -2.18
NIPAL3Q6P499 SNORD113-7-201ENST00000363762 77 ntBASIC1.44□□□□□ -2.18
NIPAL3Q6P499 RNA5SP190-201ENST00000365222 118 ntBASIC1.44□□□□□ -2.18
NIPAL3Q6P499 RNU6-1235P-201ENST00000384559 107 ntBASIC1.44□□□□□ -2.18
NIPAL3Q6P499 RNU6-780P-201ENST00000391030 104 ntBASIC1.44□□□□□ -2.18
NIPAL3Q6P499 MTCO1P20-201ENST00000425366 358 ntBASIC1.44□□□□□ -2.18
NIPAL3Q6P499 C8orf59P1-201ENST00000429930 303 ntBASIC1.44□□□□□ -2.18
NIPAL3Q6P499 JTBP1-201ENST00000441314 247 ntBASIC1.44□□□□□ -2.18
NIPAL3Q6P499 AC069257.2-201ENST00000441819 155 ntBASIC1.44□□□□□ -2.18
NIPAL3Q6P499 AL353572.1-201ENST00000442490 417 ntBASIC1.44□□□□□ -2.18
NIPAL3Q6P499 MTND2P22-201ENST00000444325 1033 ntBASIC1.44□□□□□ -2.18
NIPAL3Q6P499 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.44□□□□□ -2.18
NIPAL3Q6P499 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.44□□□□□ -2.18
NIPAL3Q6P499 RNU6-498P-201ENST00000459468 107 ntBASIC1.44□□□□□ -2.18
NIPAL3Q6P499 AC007215.1-201ENST00000464893 276 ntBASIC1.44□□□□□ -2.18
NIPAL3Q6P499 RPL26P26-201ENST00000480251 434 ntBASIC1.44□□□□□ -2.18
NIPAL3Q6P499 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.44□□□□□ -2.18
NIPAL3Q6P499 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.44□□□□□ -2.18
NIPAL3Q6P499 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.44□□□□□ -2.18
NIPAL3Q6P499 RNA5SP437-201ENST00000517249 129 ntBASIC1.44□□□□□ -2.18
NIPAL3Q6P499 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.44□□□□□ -2.18
NIPAL3Q6P499 AC024909.2-201ENST00000553035 286 ntBASIC1.44□□□□□ -2.18
NIPAL3Q6P499 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.44□□□□□ -2.18
NIPAL3Q6P499 AC126177.8-201ENST00000618339 1015 ntBASIC1.44□□□□□ -2.18
NIPAL3Q6P499 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
NIPAL3Q6P499 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.44□□□□□ -2.18
NIPAL3Q6P499 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.43□□□□□ -2.18
NIPAL3Q6P499 AC100821.1-201ENST00000523153 2479 ntBASIC1.43□□□□□ -2.18
NIPAL3Q6P499 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
NIPAL3Q6P499 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
NIPAL3Q6P499 RNU6-975P-201ENST00000384296 105 ntBASIC1.43□□□□□ -2.18
NIPAL3Q6P499 AL117342.1-201ENST00000404861 406 ntBASIC1.43□□□□□ -2.18
NIPAL3Q6P499 CST2P1-201ENST00000425770 87 ntBASIC1.43□□□□□ -2.18
NIPAL3Q6P499 AC016717.1-201ENST00000448918 286 ntBASIC1.43□□□□□ -2.18
NIPAL3Q6P499 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.43□□□□□ -2.18
NIPAL3Q6P499 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.43□□□□□ -2.18
NIPAL3Q6P499 AC016957.1-201ENST00000534895 309 ntBASIC1.43□□□□□ -2.18
NIPAL3Q6P499 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.43□□□□□ -2.18
NIPAL3Q6P499 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.43□□□□□ -2.18
NIPAL3Q6P499 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.43□□□□□ -2.18
NIPAL3Q6P499 ZNF519P2-201ENST00000557032 169 ntBASIC1.43□□□□□ -2.18
NIPAL3Q6P499 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.43□□□□□ -2.18
NIPAL3Q6P499 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.43□□□□□ -2.18
NIPAL3Q6P499 MIR3683-201ENST00000580847 82 ntBASIC1.43□□□□□ -2.18
NIPAL3Q6P499 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.43□□□□□ -2.18
NIPAL3Q6P499 AL353149.1-201ENST00000610667 244 ntBASIC1.43□□□□□ -2.18
NIPAL3Q6P499 uc_338.5-201ENST00000611839 155 ntBASIC1.43□□□□□ -2.18
NIPAL3Q6P499 MIR8063-201ENST00000621930 81 ntBASIC1.43□□□□□ -2.18
NIPAL3Q6P499 SCARNA4-201ENST00000629045 128 ntBASIC1.43□□□□□ -2.18
NIPAL3Q6P499 RNU6-1305P-201ENST00000364353 104 ntBASIC1.42□□□□□ -2.18
NIPAL3Q6P499 Y_RNA.372-201ENST00000365599 102 ntBASIC1.42□□□□□ -2.18
NIPAL3Q6P499 MIR320A-201ENST00000385302 82 ntBASIC1.42□□□□□ -2.18
NIPAL3Q6P499 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.42□□□□□ -2.18
NIPAL3Q6P499 MIR764-201ENST00000390811 85 ntBASIC1.42□□□□□ -2.18
NIPAL3Q6P499 RNU1-78P-201ENST00000391248 165 ntBASIC1.42□□□□□ -2.18
NIPAL3Q6P499 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.42□□□□□ -2.18
NIPAL3Q6P499 AL358453.1-201ENST00000422522 250 ntBASIC1.42□□□□□ -2.18
NIPAL3Q6P499 Z83846.1-201ENST00000446798 265 ntBASIC1.42□□□□□ -2.18
NIPAL3Q6P499 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.42□□□□□ -2.18
NIPAL3Q6P499 RNU7-187P-201ENST00000458985 68 ntBASIC1.42□□□□□ -2.18
NIPAL3Q6P499 SNORD13-201ENST00000459299 104 ntBASIC1.42□□□□□ -2.18
NIPAL3Q6P499 HMGN2P9-201ENST00000476875 229 ntBASIC1.42□□□□□ -2.18
NIPAL3Q6P499 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.42□□□□□ -2.18
NIPAL3Q6P499 RPL23AP75-201ENST00000491601 451 ntBASIC1.42□□□□□ -2.18
NIPAL3Q6P499 TRBVA-201ENST00000498804 316 ntBASIC1.42□□□□□ -2.18
NIPAL3Q6P499 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.42□□□□□ -2.18
NIPAL3Q6P499 Y_RNA.665-201ENST00000516177 98 ntBASIC1.42□□□□□ -2.18
NIPAL3Q6P499 SNORA77B-201ENST00000578179 125 ntBASIC1.42□□□□□ -2.18
NIPAL3Q6P499 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.42□□□□□ -2.18
NIPAL3Q6P499 AC103591.3-201ENST00000608684 209 ntBASIC1.42□□□□□ -2.18
NIPAL3Q6P499 AC092954.2-201ENST00000609103 430 ntBASIC1.42□□□□□ -2.18
NIPAL3Q6P499 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms