Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 RNU5F-4P-201ENST00000516581 114 ntBASIC2.73□□□□□ -1.97
PPP4R4Q6NUP7 Y_RNA.711-201ENST00000516993 102 ntBASIC2.73□□□□□ -1.97
PPP4R4Q6NUP7 AC087441.2-201ENST00000529141 262 ntBASIC2.73□□□□□ -1.97
PPP4R4Q6NUP7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PPP4R4Q6NUP7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.73□□□□□ -1.97
PPP4R4Q6NUP7 AL049779.4-201ENST00000604500 156 ntBASIC2.73□□□□□ -1.97
PPP4R4Q6NUP7 SCARNA15.3-201ENST00000626315 122 ntBASIC2.73□□□□□ -1.97
PPP4R4Q6NUP7 SCARNA4.1-201ENST00000628597 123 ntBASIC2.73□□□□□ -1.97
PPP4R4Q6NUP7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PPP4R4Q6NUP7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
PPP4R4Q6NUP7 RNU6-1301P-201ENST00000362724 104 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 SNORA25.6-201ENST00000364121 118 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 MIR329-1-201ENST00000385028 80 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 MIR548P-201ENST00000408336 84 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 MTND4P19-201ENST00000446659 478 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 AC016925.1-201ENST00000458303 298 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 RNU7-14P-201ENST00000459331 62 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 RNU6-344P-201ENST00000516635 111 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 RN7SKP295-201ENST00000517264 153 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 AC093023.1-201ENST00000547375 507 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 AK6P2-201ENST00000549020 471 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 MIR4529-201ENST00000578110 78 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 MZT1P2-201ENST00000604387 248 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 AC005296.1-201ENST00000616145 209 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 AC006386.2-201ENST00000624491 75 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 AC012005.1-201ENST00000624575 75 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 AL137790.1-201ENST00000634283 177 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 ZNF72P-201ENST00000425869 1908 ntBASIC2.72□□□□□ -1.97
PPP4R4Q6NUP7 RNU6-545P-201ENST00000362681 104 ntBASIC2.71□□□□□ -1.98
PPP4R4Q6NUP7 RNU6-1164P-201ENST00000364428 107 ntBASIC2.71□□□□□ -1.98
PPP4R4Q6NUP7 SNORD31B-201ENST00000364977 69 ntBASIC2.71□□□□□ -1.98
PPP4R4Q6NUP7 RNU6-708P-201ENST00000384217 107 ntBASIC2.71□□□□□ -1.98
PPP4R4Q6NUP7 MIR512-1-201ENST00000384913 84 ntBASIC2.71□□□□□ -1.98
PPP4R4Q6NUP7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.71□□□□□ -1.98
PPP4R4Q6NUP7 AC055731.1-201ENST00000474387 401 ntBASIC2.71□□□□□ -1.98
PPP4R4Q6NUP7 SNORA9.3-201ENST00000516383 129 ntBASIC2.71□□□□□ -1.98
PPP4R4Q6NUP7 RNU2-19P-201ENST00000517288 84 ntBASIC2.71□□□□□ -1.98
PPP4R4Q6NUP7 AP002770.2-201ENST00000543613 532 ntBASIC2.71□□□□□ -1.98
PPP4R4Q6NUP7 AC007336.1-201ENST00000576365 3828 ntBASIC2.71□□□□□ -1.98
PPP4R4Q6NUP7 AL357075.2-201ENST00000614906 189 ntBASIC2.71□□□□□ -1.98
PPP4R4Q6NUP7 U2.1-201ENST00000618978 145 ntBASIC2.71□□□□□ -1.98
PPP4R4Q6NUP7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.71□□□□□ -1.98
PPP4R4Q6NUP7 AC008873.1-201ENST00000625051 138 ntBASIC2.71□□□□□ -1.98
PPP4R4Q6NUP7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PPP4R4Q6NUP7 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
PPP4R4Q6NUP7 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PPP4R4Q6NUP7 RNU1-62P-201ENST00000362599 164 ntBASIC2.7□□□□□ -1.98
PPP4R4Q6NUP7 Y_RNA.80-201ENST00000362996 102 ntBASIC2.7□□□□□ -1.98
PPP4R4Q6NUP7 RNU6-280P-201ENST00000364145 104 ntBASIC2.7□□□□□ -1.98
PPP4R4Q6NUP7 RNU6-1227P-201ENST00000383981 107 ntBASIC2.7□□□□□ -1.98
PPP4R4Q6NUP7 Y_RNA.485-201ENST00000384395 102 ntBASIC2.7□□□□□ -1.98
PPP4R4Q6NUP7 AC123900.1-201ENST00000420390 96 ntBASIC2.7□□□□□ -1.98
PPP4R4Q6NUP7 AC022868.1-201ENST00000517767 391 ntBASIC2.7□□□□□ -1.98
PPP4R4Q6NUP7 ANP32BP3-201ENST00000559213 706 ntBASIC2.7□□□□□ -1.98
PPP4R4Q6NUP7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.7□□□□□ -1.98
PPP4R4Q6NUP7 MIR5188-201ENST00000583467 113 ntBASIC2.7□□□□□ -1.98
PPP4R4Q6NUP7 MIR3171-201ENST00000584270 74 ntBASIC2.7□□□□□ -1.98
PPP4R4Q6NUP7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.7□□□□□ -1.98
PPP4R4Q6NUP7 AC006157.1-201ENST00000611750 366 ntBASIC2.7□□□□□ -1.98
PPP4R4Q6NUP7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.7□□□□□ -1.98
PPP4R4Q6NUP7 AL606534.2-204ENST00000635008 178 ntBASIC2.7□□□□□ -1.98
PPP4R4Q6NUP7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 Y_RNA.28-201ENST00000362554 111 ntBASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 SNORA18.3-201ENST00000384122 132 ntBASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 RNU6-1145P-201ENST00000384246 107 ntBASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 AC114482.1-201ENST00000418010 247 ntBASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 COTL1P1-201ENST00000422309 375 ntBASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 AC010095.1-201ENST00000443543 144 ntBASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 S100A11P2-201ENST00000467589 312 ntBASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 HMGN2P9-201ENST00000476875 229 ntBASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 RNU6-911P-201ENST00000516523 104 ntBASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 AC144568.1-201ENST00000520139 137 ntBASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 RRN3P3-201ENST00000549207 578 ntBASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 AL356055.1-201ENST00000602528 446 ntBASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 AC025754.2-201ENST00000606491 432 ntBASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 AC010999.1-201ENST00000611856 324 ntBASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 AC243829.7-201ENST00000633081 225 ntBASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.69□□□□□ -1.98
PPP4R4Q6NUP7 RNU6-727P-201ENST00000363592 107 ntBASIC2.68□□□□□ -1.98
PPP4R4Q6NUP7 SNORA22B-201ENST00000383876 138 ntBASIC2.68□□□□□ -1.98
PPP4R4Q6NUP7 Y_RNA.415-201ENST00000384012 112 ntBASIC2.68□□□□□ -1.98
PPP4R4Q6NUP7 RNU6-793P-201ENST00000384233 104 ntBASIC2.68□□□□□ -1.98
PPP4R4Q6NUP7 MIR1283-2-201ENST00000408621 87 ntBASIC2.68□□□□□ -1.98
PPP4R4Q6NUP7 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.68□□□□□ -1.98
PPP4R4Q6NUP7 EEF1A1P41-201ENST00000414667 207 ntBASIC2.68□□□□□ -1.98
PPP4R4Q6NUP7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.68□□□□□ -1.98
PPP4R4Q6NUP7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 271.5 ms