Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 Y_RNA.38-201ENST00000362617 102 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 RNU6-562P-201ENST00000362731 107 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 SNORD113-7-201ENST00000363762 77 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 Y_RNA.372-201ENST00000365599 102 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 RNU6-338P-201ENST00000383888 105 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 RNU6-784P-201ENST00000384330 106 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 Y_RNA.517-201ENST00000384551 106 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 FGF7P8-201ENST00000402994 292 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 AC016907.1-201ENST00000419483 435 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 MRPS10P2-201ENST00000431226 381 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.49□□□□□ -2.17
ATL3Q6DD88 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.49□□□□□ -2.17
ATL3Q6DD88 snoU13.6-201ENST00000458785 104 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 RNU1-123P-201ENST00000458950 160 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 AC087477.1-201ENST00000465747 340 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 RNU5F-4P-201ENST00000516581 114 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 RNU6-1332P-201ENST00000516666 104 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 AC090517.1-201ENST00000569307 266 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 MIR4422-201ENST00000581938 83 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 AC023043.2-201ENST00000589678 1026 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 CTHRC1P1-201ENST00000605383 469 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 MIR8076-201ENST00000611401 83 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 DISC2.1-201ENST00000612827 205 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 FER-210ENST00000628534 558 ntTSL 5 BASIC1.49□□□□□ -2.17
ATL3Q6DD88 ZNF209P-201ENST00000593450 2304 ntBASIC1.49□□□□□ -2.17
ATL3Q6DD88 RNY3P3-201ENST00000363816 102 ntBASIC1.48□□□□□ -2.17
ATL3Q6DD88 Y_RNA.256-201ENST00000364594 104 ntBASIC1.48□□□□□ -2.17
ATL3Q6DD88 RNU6-438P-201ENST00000365561 103 ntBASIC1.48□□□□□ -2.17
ATL3Q6DD88 RNU6-214P-201ENST00000384130 107 ntBASIC1.48□□□□□ -2.17
ATL3Q6DD88 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.48□□□□□ -2.17
ATL3Q6DD88 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
ATL3Q6DD88 Y_RNA.615-201ENST00000410769 117 ntBASIC1.48□□□□□ -2.17
ATL3Q6DD88 SNRPEP10-201ENST00000420249 274 ntBASIC1.48□□□□□ -2.17
ATL3Q6DD88 MTND3P21-201ENST00000433774 331 ntBASIC1.48□□□□□ -2.17
ATL3Q6DD88 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.48□□□□□ -2.17
ATL3Q6DD88 MTCO2P7-201ENST00000446518 666 ntBASIC1.48□□□□□ -2.17
ATL3Q6DD88 U8.21-201ENST00000459536 136 ntBASIC1.48□□□□□ -2.17
ATL3Q6DD88 AC007215.1-201ENST00000464893 276 ntBASIC1.48□□□□□ -2.17
ATL3Q6DD88 AC010531.2-201ENST00000465012 153 ntBASIC1.48□□□□□ -2.17
ATL3Q6DD88 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.48□□□□□ -2.17
ATL3Q6DD88 RNU6-1053P-201ENST00000515930 101 ntBASIC1.48□□□□□ -2.17
ATL3Q6DD88 Y_RNA.665-201ENST00000516177 98 ntBASIC1.48□□□□□ -2.17
ATL3Q6DD88 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.48□□□□□ -2.17
ATL3Q6DD88 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.48□□□□□ -2.17
ATL3Q6DD88 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.48□□□□□ -2.17
ATL3Q6DD88 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.48□□□□□ -2.17
ATL3Q6DD88 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
ATL3Q6DD88 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.47□□□□□ -2.17
ATL3Q6DD88 MIR424-201ENST00000362227 98 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 RNU6-451P-201ENST00000362921 107 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 RNU6-112P-201ENST00000363599 104 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 SNORA18.2-201ENST00000383865 132 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 RNU6-296P-201ENST00000384608 107 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 FTH1P12-201ENST00000432137 551 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 AC099677.2-201ENST00000436385 175 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 NDUFA5P4-201ENST00000436704 385 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 AC007395.1-201ENST00000451333 677 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.47□□□□□ -2.17
ATL3Q6DD88 RPS29P29-201ENST00000456396 171 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 HMGN2P26-201ENST00000463169 339 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.47□□□□□ -2.17
ATL3Q6DD88 AF186996.7-201ENST00000492781 209 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 AC114801.2-201ENST00000503825 781 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 RNU6-506P-201ENST00000516553 94 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.47□□□□□ -2.17
ATL3Q6DD88 AC026371.1-201ENST00000551867 419 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 AL161670.1-201ENST00000554348 137 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 MIR3660-201ENST00000584845 100 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.47□□□□□ -2.17
ATL3Q6DD88 AC016727.2-201ENST00000603988 621 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 AL133215.3-201ENST00000609801 448 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 RMST_3.1-201ENST00000611651 109 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 AC099654.12-201ENST00000639868 649 ntBASIC1.47□□□□□ -2.17
ATL3Q6DD88 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
ATL3Q6DD88 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.47□□□□□ -2.17
ATL3Q6DD88 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
ATL3Q6DD88 AC091812.1-201ENST00000432235 1948 ntBASIC1.46□□□□□ -2.18
ATL3Q6DD88 RNU6-545P-201ENST00000362681 104 ntBASIC1.46□□□□□ -2.18
ATL3Q6DD88 Y_RNA.123-201ENST00000363338 102 ntBASIC1.46□□□□□ -2.18
ATL3Q6DD88 Y_RNA.436-201ENST00000384097 102 ntBASIC1.46□□□□□ -2.18
ATL3Q6DD88 RNU1-78P-201ENST00000391248 165 ntBASIC1.46□□□□□ -2.18
ATL3Q6DD88 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
ATL3Q6DD88 RNU6-955P-201ENST00000410497 104 ntBASIC1.46□□□□□ -2.18
ATL3Q6DD88 EBAG9P1-201ENST00000418955 543 ntBASIC1.46□□□□□ -2.18
ATL3Q6DD88 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.46□□□□□ -2.18
ATL3Q6DD88 MTND1P11-201ENST00000456661 876 ntBASIC1.46□□□□□ -2.18
ATL3Q6DD88 snoU13.9-201ENST00000458927 103 ntBASIC1.46□□□□□ -2.18
ATL3Q6DD88 RNU7-66P-201ENST00000459469 62 ntBASIC1.46□□□□□ -2.18
ATL3Q6DD88 MTCO1P29-201ENST00000496868 288 ntBASIC1.46□□□□□ -2.18
ATL3Q6DD88 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.46□□□□□ -2.18
ATL3Q6DD88 AC097473.1-201ENST00000508142 408 ntBASIC1.46□□□□□ -2.18
ATL3Q6DD88 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.46□□□□□ -2.18
ATL3Q6DD88 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.46□□□□□ -2.18
ATL3Q6DD88 AL160236.1-201ENST00000556317 195 ntBASIC1.46□□□□□ -2.18
ATL3Q6DD88 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.46□□□□□ -2.18
ATL3Q6DD88 PRR13P7-201ENST00000605538 430 ntBASIC1.46□□□□□ -2.18
ATL3Q6DD88 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.46□□□□□ -2.18
ATL3Q6DD88 AC068205.3-201ENST00000636385 468 ntBASIC1.46□□□□□ -2.18
ATL3Q6DD88 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
ATL3Q6DD88 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms