Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 EEF1B2P7-201ENST00000451177 676 ntBASIC4.31□□□□□ -1.72
RNF20Q5VTR2 RPS3P1-201ENST00000456781 192 ntBASIC4.31□□□□□ -1.72
RNF20Q5VTR2 AC117454.1-201ENST00000491120 168 ntBASIC4.31□□□□□ -1.72
RNF20Q5VTR2 RNU2-27P-201ENST00000516185 142 ntBASIC4.31□□□□□ -1.72
RNF20Q5VTR2 RNU6-659P-201ENST00000516454 104 ntBASIC4.31□□□□□ -1.72
RNF20Q5VTR2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF20Q5VTR2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF20Q5VTR2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF20Q5VTR2 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF20Q5VTR2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF20Q5VTR2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF20Q5VTR2 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.3□□□□□ -1.72
RNF20Q5VTR2 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
RNF20Q5VTR2 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RNF20Q5VTR2 SNORA63.4-201ENST00000362763 126 ntBASIC4.3□□□□□ -1.72
RNF20Q5VTR2 RNU6-655P-201ENST00000362858 107 ntBASIC4.3□□□□□ -1.72
RNF20Q5VTR2 SNORD6-201ENST00000365444 73 ntBASIC4.3□□□□□ -1.72
RNF20Q5VTR2 MIR184-201ENST00000384962 84 ntBASIC4.3□□□□□ -1.72
RNF20Q5VTR2 SNORA57.1-201ENST00000391227 145 ntBASIC4.3□□□□□ -1.72
RNF20Q5VTR2 RNU2-37P-201ENST00000410695 177 ntBASIC4.3□□□□□ -1.72
RNF20Q5VTR2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF20Q5VTR2 AL139281.1-201ENST00000422120 335 ntBASIC4.3□□□□□ -1.72
RNF20Q5VTR2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.3□□□□□ -1.72
RNF20Q5VTR2 RNU7-107P-201ENST00000459121 61 ntBASIC4.3□□□□□ -1.72
RNF20Q5VTR2 RPL23AP62-201ENST00000463396 453 ntBASIC4.3□□□□□ -1.72
RNF20Q5VTR2 AC112771.1-201ENST00000463581 102 ntBASIC4.3□□□□□ -1.72
RNF20Q5VTR2 AP001328.1-201ENST00000528550 176 ntBASIC4.3□□□□□ -1.72
RNF20Q5VTR2 AC012493.2-201ENST00000595083 291 ntBASIC4.3□□□□□ -1.72
RNF20Q5VTR2 AL031274.2-201ENST00000599419 203 ntBASIC4.3□□□□□ -1.72
RNF20Q5VTR2 RMST_8.1-201ENST00000610287 165 ntBASIC4.3□□□□□ -1.72
RNF20Q5VTR2 AP003355.3-201ENST00000623465 114 ntBASIC4.3□□□□□ -1.72
RNF20Q5VTR2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF20Q5VTR2 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.3□□□□□ -1.72
RNF20Q5VTR2 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.3□□□□□ -1.72
RNF20Q5VTR2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF20Q5VTR2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF20Q5VTR2 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
RNF20Q5VTR2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF20Q5VTR2 RNU6-1210P-201ENST00000363775 107 ntBASIC4.29□□□□□ -1.72
RNF20Q5VTR2 Y_RNA.361-201ENST00000365515 120 ntBASIC4.29□□□□□ -1.72
RNF20Q5VTR2 AC245291.1-201ENST00000419501 328 ntBASIC4.29□□□□□ -1.72
RNF20Q5VTR2 AC010154.1-201ENST00000425857 269 ntBASIC4.29□□□□□ -1.72
RNF20Q5VTR2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.29□□□□□ -1.72
RNF20Q5VTR2 RPS29P31-201ENST00000446147 164 ntBASIC4.29□□□□□ -1.72
RNF20Q5VTR2 AC010099.1-201ENST00000455434 375 ntBASIC4.29□□□□□ -1.72
RNF20Q5VTR2 SRIP1-201ENST00000489235 288 ntBASIC4.29□□□□□ -1.72
RNF20Q5VTR2 SNORA70.12-201ENST00000516084 153 ntBASIC4.29□□□□□ -1.72
RNF20Q5VTR2 AP000867.2-201ENST00000532468 320 ntBASIC4.29□□□□□ -1.72
RNF20Q5VTR2 MIR4738-201ENST00000579134 87 ntBASIC4.29□□□□□ -1.72
RNF20Q5VTR2 MIR4425-201ENST00000580572 84 ntBASIC4.29□□□□□ -1.72
RNF20Q5VTR2 AC068647.2-201ENST00000637380 353 ntBASIC4.29□□□□□ -1.72
RNF20Q5VTR2 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.29□□□□□ -1.72
RNF20Q5VTR2 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
RNF20Q5VTR2 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
RNF20Q5VTR2 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RNF20Q5VTR2 AC069528.2-201ENST00000624849 1991 ntBASIC4.29□□□□□ -1.72
RNF20Q5VTR2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.29□□□□□ -1.72
RNF20Q5VTR2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF20Q5VTR2 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.28□□□□□ -1.72
RNF20Q5VTR2 Y_RNA.124-201ENST00000363339 93 ntBASIC4.28□□□□□ -1.72
RNF20Q5VTR2 RNU6-144P-201ENST00000383951 107 ntBASIC4.28□□□□□ -1.72
RNF20Q5VTR2 U8.11-201ENST00000384699 133 ntBASIC4.28□□□□□ -1.72
RNF20Q5VTR2 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
RNF20Q5VTR2 RPS27P1-201ENST00000450552 247 ntBASIC4.28□□□□□ -1.72
RNF20Q5VTR2 HMGN2P7-201ENST00000456186 273 ntBASIC4.28□□□□□ -1.72
RNF20Q5VTR2 U8.18-201ENST00000459285 133 ntBASIC4.28□□□□□ -1.72
RNF20Q5VTR2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.28□□□□□ -1.72
RNF20Q5VTR2 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF20Q5VTR2 MIR3646-201ENST00000578301 84 ntBASIC4.28□□□□□ -1.72
RNF20Q5VTR2 MIR5688-201ENST00000580619 83 ntBASIC4.28□□□□□ -1.72
RNF20Q5VTR2 AC012640.5-201ENST00000623897 319 ntBASIC4.28□□□□□ -1.72
RNF20Q5VTR2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF20Q5VTR2 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
RNF20Q5VTR2 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.28□□□□□ -1.72
RNF20Q5VTR2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
RNF20Q5VTR2 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.28□□□□□ -1.72
RNF20Q5VTR2 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RNF20Q5VTR2 PWAR6-201ENST00000552334 4618 ntBASIC4.27□□□□□ -1.73
RNF20Q5VTR2 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.27□□□□□ -1.73
RNF20Q5VTR2 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF20Q5VTR2 RNU6-834P-201ENST00000362367 110 ntBASIC4.27□□□□□ -1.73
RNF20Q5VTR2 RNU6-198P-201ENST00000384258 104 ntBASIC4.27□□□□□ -1.73
RNF20Q5VTR2 ATP5A1P2-201ENST00000412323 255 ntBASIC4.27□□□□□ -1.73
RNF20Q5VTR2 RNU7-170P-201ENST00000459303 61 ntBASIC4.27□□□□□ -1.73
RNF20Q5VTR2 RPS27P26-201ENST00000494583 239 ntBASIC4.27□□□□□ -1.73
RNF20Q5VTR2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC4.27□□□□□ -1.73
RNF20Q5VTR2 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.27□□□□□ -1.73
RNF20Q5VTR2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.27□□□□□ -1.73
RNF20Q5VTR2 MIR7153-201ENST00000637758 57 ntBASIC4.27□□□□□ -1.73
RNF20Q5VTR2 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
RNF20Q5VTR2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RNF20Q5VTR2 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF20Q5VTR2 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RNF20Q5VTR2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.27□□□□□ -1.73
RNF20Q5VTR2 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
RNF20Q5VTR2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF20Q5VTR2 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF20Q5VTR2 RNA5SP51-201ENST00000364750 119 ntBASIC4.26□□□□□ -1.73
RNF20Q5VTR2 RNA5SP479-201ENST00000364858 117 ntBASIC4.26□□□□□ -1.73
RNF20Q5VTR2 Y_RNA.393-201ENST00000383936 102 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms