Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AP000873.1-201ENST00000463987 400 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 AC025518.1-201ENST00000479856 347 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 AC117454.1-201ENST00000491120 168 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 AC093663.1-201ENST00000497190 394 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 RNU6-412P-201ENST00000516434 106 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 Y_RNA.690-201ENST00000516603 95 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 RNU6-197P-201ENST00000516680 100 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RC3H1Q5TC82 AL451007.1-201ENST00000595491 289 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 AC099778.2-201ENST00000610904 211 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 AC025166.1-201ENST00000612411 163 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 MIR548AY-201ENST00000617669 107 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 SCARNA15.3-201ENST00000626315 122 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 SCARNA4.1-201ENST00000628597 123 ntBASIC4.59□□□□□ -1.67
RC3H1Q5TC82 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
RC3H1Q5TC82 AL596211.1-201ENST00000569873 2277 ntBASIC4.58□□□□□ -1.68
RC3H1Q5TC82 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
RC3H1Q5TC82 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RC3H1Q5TC82 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RC3H1Q5TC82 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
RC3H1Q5TC82 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
RC3H1Q5TC82 RNU6-1131P-201ENST00000364955 107 ntBASIC4.58□□□□□ -1.68
RC3H1Q5TC82 RNU6-487P-201ENST00000365430 104 ntBASIC4.58□□□□□ -1.68
RC3H1Q5TC82 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
RC3H1Q5TC82 EI24P2-201ENST00000397776 1076 ntBASIC4.58□□□□□ -1.68
RC3H1Q5TC82 RNA5SP504-201ENST00000410676 117 ntBASIC4.58□□□□□ -1.68
RC3H1Q5TC82 AC004866.1-201ENST00000411748 78 ntBASIC4.58□□□□□ -1.68
RC3H1Q5TC82 TOMM22P1-201ENST00000418578 312 ntBASIC4.58□□□□□ -1.68
RC3H1Q5TC82 AP001486.1-201ENST00000463339 476 ntBASIC4.58□□□□□ -1.68
RC3H1Q5TC82 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.58□□□□□ -1.68
RC3H1Q5TC82 RNU2-58P-201ENST00000516403 183 ntBASIC4.58□□□□□ -1.68
RC3H1Q5TC82 RNU7-115P-201ENST00000516433 55 ntBASIC4.58□□□□□ -1.68
RC3H1Q5TC82 RNU6-1282P-201ENST00000516735 96 ntBASIC4.58□□□□□ -1.68
RC3H1Q5TC82 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
RC3H1Q5TC82 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
RC3H1Q5TC82 AC069528.2-201ENST00000624849 1991 ntBASIC4.58□□□□□ -1.68
RC3H1Q5TC82 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RC3H1Q5TC82 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RC3H1Q5TC82 MAPK10-253ENST00000641010 4072 ntBASIC4.57□□□□□ -1.68
RC3H1Q5TC82 MIR93-201ENST00000385024 80 ntBASIC4.57□□□□□ -1.68
RC3H1Q5TC82 RN7SKP111-201ENST00000410349 271 ntBASIC4.57□□□□□ -1.68
RC3H1Q5TC82 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.57□□□□□ -1.68
RC3H1Q5TC82 Z75741.1-201ENST00000446793 314 ntBASIC4.57□□□□□ -1.68
RC3H1Q5TC82 AIG1P1-201ENST00000503376 148 ntBASIC4.57□□□□□ -1.68
RC3H1Q5TC82 RNU6-581P-201ENST00000516214 105 ntBASIC4.57□□□□□ -1.68
RC3H1Q5TC82 AC018630.3-201ENST00000542637 96 ntBASIC4.57□□□□□ -1.68
RC3H1Q5TC82 AC025281.1-201ENST00000567026 265 ntBASIC4.57□□□□□ -1.68
RC3H1Q5TC82 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.57□□□□□ -1.68
RC3H1Q5TC82 AP001318.4-201ENST00000616637 121 ntBASIC4.57□□□□□ -1.68
RC3H1Q5TC82 AC018692.3-201ENST00000623929 123 ntBASIC4.57□□□□□ -1.68
RC3H1Q5TC82 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.57□□□□□ -1.68
RC3H1Q5TC82 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RC3H1Q5TC82 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RC3H1Q5TC82 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RC3H1Q5TC82 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.56□□□□□ -1.68
RC3H1Q5TC82 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RC3H1Q5TC82 RNU6-884P-201ENST00000363889 107 ntBASIC4.56□□□□□ -1.68
RC3H1Q5TC82 Y_RNA.281-201ENST00000364774 94 ntBASIC4.56□□□□□ -1.68
RC3H1Q5TC82 AL365496.1-201ENST00000426885 215 ntBASIC4.56□□□□□ -1.68
RC3H1Q5TC82 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.56□□□□□ -1.68
RC3H1Q5TC82 RNA5SP309-201ENST00000516670 106 ntBASIC4.56□□□□□ -1.68
RC3H1Q5TC82 RNU1-117P-201ENST00000517041 158 ntBASIC4.56□□□□□ -1.68
RC3H1Q5TC82 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.56□□□□□ -1.68
RC3H1Q5TC82 SNRPGP15-201ENST00000600149 222 ntBASIC4.56□□□□□ -1.68
RC3H1Q5TC82 TCL6_2.1-201ENST00000615162 119 ntBASIC4.56□□□□□ -1.68
RC3H1Q5TC82 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
RC3H1Q5TC82 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.56□□□□□ -1.68
RC3H1Q5TC82 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RC3H1Q5TC82 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
RC3H1Q5TC82 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RC3H1Q5TC82 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
RC3H1Q5TC82 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.56□□□□□ -1.68
RC3H1Q5TC82 MTND5P18-201ENST00000445624 1801 ntBASIC4.56□□□□□ -1.68
RC3H1Q5TC82 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RC3H1Q5TC82 AC002543.1-201ENST00000299783 1954 ntBASIC4.55□□□□□ -1.68
RC3H1Q5TC82 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.55□□□□□ -1.68
RC3H1Q5TC82 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RC3H1Q5TC82 RNU6-766P-201ENST00000362478 107 ntBASIC4.55□□□□□ -1.68
RC3H1Q5TC82 RNU6-309P-201ENST00000364573 106 ntBASIC4.55□□□□□ -1.68
RC3H1Q5TC82 AP002088.1-201ENST00000382740 395 ntBASIC4.55□□□□□ -1.68
RC3H1Q5TC82 RNU6-49P-201ENST00000384256 107 ntBASIC4.55□□□□□ -1.68
RC3H1Q5TC82 Y_RNA.587-201ENST00000391210 103 ntBASIC4.55□□□□□ -1.68
RC3H1Q5TC82 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.55□□□□□ -1.68
RC3H1Q5TC82 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.55□□□□□ -1.68
RC3H1Q5TC82 RPL39P40-201ENST00000445481 146 ntBASIC4.55□□□□□ -1.68
RC3H1Q5TC82 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.55□□□□□ -1.68
RC3H1Q5TC82 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.55□□□□□ -1.68
RC3H1Q5TC82 AC006445.2-201ENST00000510061 472 ntBASIC4.55□□□□□ -1.68
RC3H1Q5TC82 PHBP14-201ENST00000512887 367 ntBASIC4.55□□□□□ -1.68
RC3H1Q5TC82 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.55□□□□□ -1.68
RC3H1Q5TC82 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.55□□□□□ -1.68
RC3H1Q5TC82 AC027176.1-201ENST00000560204 514 ntBASIC4.55□□□□□ -1.68
RC3H1Q5TC82 AC005562.2-201ENST00000618264 111 ntBASIC4.55□□□□□ -1.68
RC3H1Q5TC82 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RC3H1Q5TC82 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RC3H1Q5TC82 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RC3H1Q5TC82 AL513302.2-201ENST00000562313 1842 ntBASIC4.54□□□□□ -1.68
RC3H1Q5TC82 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
RC3H1Q5TC82 RNA5SP189-201ENST00000364920 115 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms