Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.97□□□□□ -1.77
COL13A1Q5TAT6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.97□□□□□ -1.77
COL13A1Q5TAT6 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.97□□□□□ -1.77
COL13A1Q5TAT6 AC008011.1-201ENST00000545989 227 ntBASIC3.97□□□□□ -1.77
COL13A1Q5TAT6 MIR2682-201ENST00000580305 110 ntBASIC3.97□□□□□ -1.77
COL13A1Q5TAT6 HMGN2P15-201ENST00000585707 270 ntBASIC3.97□□□□□ -1.77
COL13A1Q5TAT6 AC091152.3-201ENST00000604227 325 ntBASIC3.97□□□□□ -1.77
COL13A1Q5TAT6 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL13A1Q5TAT6 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.97□□□□□ -1.77
COL13A1Q5TAT6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL13A1Q5TAT6 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL13A1Q5TAT6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.97□□□□□ -1.77
COL13A1Q5TAT6 AC100821.1-201ENST00000523153 2479 ntBASIC3.97□□□□□ -1.77
COL13A1Q5TAT6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.97□□□□□ -1.77
COL13A1Q5TAT6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL13A1Q5TAT6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
COL13A1Q5TAT6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL13A1Q5TAT6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
COL13A1Q5TAT6 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.77
COL13A1Q5TAT6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL13A1Q5TAT6 U3.9-201ENST00000363823 204 ntBASIC3.96□□□□□ -1.78
COL13A1Q5TAT6 Y_RNA.243-201ENST00000364481 109 ntBASIC3.96□□□□□ -1.78
COL13A1Q5TAT6 Y_RNA.338-201ENST00000365320 114 ntBASIC3.96□□□□□ -1.78
COL13A1Q5TAT6 SNORA72.4-201ENST00000384174 132 ntBASIC3.96□□□□□ -1.78
COL13A1Q5TAT6 AL365496.1-201ENST00000426885 215 ntBASIC3.96□□□□□ -1.78
COL13A1Q5TAT6 AL714022.1-201ENST00000439897 151 ntBASIC3.96□□□□□ -1.78
COL13A1Q5TAT6 AC091179.1-201ENST00000461606 579 ntBASIC3.96□□□□□ -1.78
COL13A1Q5TAT6 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.96□□□□□ -1.78
COL13A1Q5TAT6 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.96□□□□□ -1.78
COL13A1Q5TAT6 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.96□□□□□ -1.78
COL13A1Q5TAT6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.96□□□□□ -1.78
COL13A1Q5TAT6 MIR6076-201ENST00000617521 113 ntBASIC3.96□□□□□ -1.78
COL13A1Q5TAT6 MIR7154-201ENST00000620673 73 ntBASIC3.96□□□□□ -1.78
COL13A1Q5TAT6 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
COL13A1Q5TAT6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL13A1Q5TAT6 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL13A1Q5TAT6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL13A1Q5TAT6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL13A1Q5TAT6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.95□□□□□ -1.78
COL13A1Q5TAT6 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
COL13A1Q5TAT6 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL13A1Q5TAT6 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL13A1Q5TAT6 SNORD114-19-201ENST00000363072 75 ntBASIC3.95□□□□□ -1.78
COL13A1Q5TAT6 U8.2-201ENST00000363156 134 ntBASIC3.95□□□□□ -1.78
COL13A1Q5TAT6 Y_RNA.368-201ENST00000365547 113 ntBASIC3.95□□□□□ -1.78
COL13A1Q5TAT6 MIR539-201ENST00000365690 78 ntBASIC3.95□□□□□ -1.78
COL13A1Q5TAT6 SNORA26.5-201ENST00000391215 123 ntBASIC3.95□□□□□ -1.78
COL13A1Q5TAT6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.95□□□□□ -1.78
COL13A1Q5TAT6 RNA5SP458-201ENST00000516188 119 ntBASIC3.95□□□□□ -1.78
COL13A1Q5TAT6 AC022616.8-201ENST00000533569 253 ntBASIC3.95□□□□□ -1.78
COL13A1Q5TAT6 Y_RNA.802-201ENST00000614892 130 ntBASIC3.95□□□□□ -1.78
COL13A1Q5TAT6 AC134026.1-201ENST00000623249 2239 ntBASIC3.95□□□□□ -1.78
COL13A1Q5TAT6 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL13A1Q5TAT6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.95□□□□□ -1.78
COL13A1Q5TAT6 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL13A1Q5TAT6 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 Y_RNA.293-201ENST00000364908 93 ntBASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 Y_RNA.337-201ENST00000365312 102 ntBASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 Y_RNA.456-201ENST00000384232 111 ntBASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 MIR526A2-201ENST00000390198 65 ntBASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 RNA5SP424-201ENST00000390988 115 ntBASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 AC004386.2-201ENST00000441858 148 ntBASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 AL137159.1-201ENST00000452808 512 ntBASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 AC090616.3-201ENST00000582184 217 ntBASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.94□□□□□ -1.78
COL13A1Q5TAT6 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 RNU1-75P-201ENST00000347264 129 ntBASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 RNU1-18P-201ENST00000363062 164 ntBASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 MIR616-201ENST00000385293 97 ntBASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 AC027124.2-201ENST00000428249 105 ntBASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 RPL23AP58-201ENST00000440453 469 ntBASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 PPBPP1-201ENST00000510807 373 ntBASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 AC008885.1-201ENST00000514930 301 ntBASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 RNA5SP208-201ENST00000516156 78 ntBASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 RNA5SP367-201ENST00000516557 118 ntBASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 MIR5006-201ENST00000583027 110 ntBASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 HSPE1P7-201ENST00000604681 321 ntBASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 AL391903.3-201ENST00000612158 163 ntBASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 AC007496.3-201ENST00000624987 3443 ntBASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
COL13A1Q5TAT6 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms