Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 RNA5SP148-201ENST00000516527 94 ntBASIC2.15□□□□□ -2.07
LRIF1Q5T3J3 AC087441.2-201ENST00000529141 262 ntBASIC2.15□□□□□ -2.07
LRIF1Q5T3J3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.15□□□□□ -2.07
LRIF1Q5T3J3 ANP32BP3-201ENST00000559213 706 ntBASIC2.15□□□□□ -2.07
LRIF1Q5T3J3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.15□□□□□ -2.07
LRIF1Q5T3J3 AC009127.3-201ENST00000570531 403 ntBASIC2.15□□□□□ -2.07
LRIF1Q5T3J3 CYP2C61P-201ENST00000604072 290 ntBASIC2.15□□□□□ -2.07
LRIF1Q5T3J3 AC046143.2-201ENST00000609789 160 ntBASIC2.15□□□□□ -2.07
LRIF1Q5T3J3 AC104985.2-201ENST00000620598 500 ntBASIC2.15□□□□□ -2.07
LRIF1Q5T3J3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.15□□□□□ -2.07
LRIF1Q5T3J3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
LRIF1Q5T3J3 RNU6-490P-201ENST00000362985 107 ntBASIC2.14□□□□□ -2.07
LRIF1Q5T3J3 Y_RNA.106-201ENST00000363189 100 ntBASIC2.14□□□□□ -2.07
LRIF1Q5T3J3 Y_RNA.315-201ENST00000365117 102 ntBASIC2.14□□□□□ -2.07
LRIF1Q5T3J3 USP9YP16-201ENST00000430287 407 ntBASIC2.14□□□□□ -2.07
LRIF1Q5T3J3 AC025750.2-201ENST00000442609 450 ntBASIC2.14□□□□□ -2.07
LRIF1Q5T3J3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.14□□□□□ -2.07
LRIF1Q5T3J3 USP9YP23-201ENST00000455085 407 ntBASIC2.14□□□□□ -2.07
LRIF1Q5T3J3 AP000870.1-201ENST00000472927 406 ntBASIC2.14□□□□□ -2.07
LRIF1Q5T3J3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.14□□□□□ -2.07
LRIF1Q5T3J3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.14□□□□□ -2.07
LRIF1Q5T3J3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.14□□□□□ -2.07
LRIF1Q5T3J3 AC022202.1-201ENST00000613515 211 ntBASIC2.14□□□□□ -2.07
LRIF1Q5T3J3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
LRIF1Q5T3J3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
LRIF1Q5T3J3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
LRIF1Q5T3J3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
LRIF1Q5T3J3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
LRIF1Q5T3J3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LRIF1Q5T3J3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
LRIF1Q5T3J3 Y_RNA.146-201ENST00000363549 102 ntBASIC2.13□□□□□ -2.07
LRIF1Q5T3J3 SNORA80A-201ENST00000363922 136 ntBASIC2.13□□□□□ -2.07
LRIF1Q5T3J3 RNU6-1040P-201ENST00000383974 107 ntBASIC2.13□□□□□ -2.07
LRIF1Q5T3J3 Y_RNA.431-201ENST00000384086 102 ntBASIC2.13□□□□□ -2.07
LRIF1Q5T3J3 MIR10B-201ENST00000385011 110 ntBASIC2.13□□□□□ -2.07
LRIF1Q5T3J3 HMGN2P39-201ENST00000398005 273 ntBASIC2.13□□□□□ -2.07
LRIF1Q5T3J3 AF228730.4-201ENST00000421457 183 ntBASIC2.13□□□□□ -2.07
LRIF1Q5T3J3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.13□□□□□ -2.07
LRIF1Q5T3J3 UBE2V1P7-201ENST00000446395 340 ntBASIC2.13□□□□□ -2.07
LRIF1Q5T3J3 AC007395.1-201ENST00000451333 677 ntBASIC2.13□□□□□ -2.07
LRIF1Q5T3J3 SNORA25.14-201ENST00000516481 132 ntBASIC2.13□□□□□ -2.07
LRIF1Q5T3J3 AC121758.2-201ENST00000553271 193 ntBASIC2.13□□□□□ -2.07
LRIF1Q5T3J3 AC090617.3-201ENST00000573670 475 ntBASIC2.13□□□□□ -2.07
LRIF1Q5T3J3 AC080078.3-201ENST00000605407 463 ntBASIC2.13□□□□□ -2.07
LRIF1Q5T3J3 AC009831.4-201ENST00000620744 325 ntBASIC2.13□□□□□ -2.07
LRIF1Q5T3J3 AL365361.1-201ENST00000566942 3481 ntBASIC2.13□□□□□ -2.07
LRIF1Q5T3J3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
LRIF1Q5T3J3 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 MTND5P16-201ENST00000460269 1703 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 Y_RNA.58-201ENST00000362807 102 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 Y_RNA.154-201ENST00000363624 102 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 RNU6-873P-201ENST00000363833 107 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 RNU6-99P-201ENST00000364721 107 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 RNY3P1-201ENST00000365085 102 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 RNY3-201ENST00000365484 102 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 Y_RNA.509-201ENST00000384506 99 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 MIR586-201ENST00000385035 97 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 MIR625-201ENST00000385047 85 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 MIR1283-1-201ENST00000408494 87 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 RNU6-1156P-201ENST00000410365 100 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 AC004866.1-201ENST00000411748 78 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 Z92545.1-201ENST00000411782 234 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 WARS2P1-201ENST00000429678 537 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 AC092423.1-201ENST00000430165 186 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 AC099799.1-201ENST00000439809 192 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 AC096638.1-201ENST00000444678 216 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 RNU7-193P-201ENST00000516723 65 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 RNU7-4P-201ENST00000516961 62 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 MIR2355-201ENST00000517199 87 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 SNORA31.25-201ENST00000517242 134 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 MIR3200-201ENST00000580767 85 ntBASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LRIF1Q5T3J3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 AC073544.1-201ENST00000600110 1595 ntBASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 RNU6-281P-201ENST00000384212 103 ntBASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 RNU6-160P-201ENST00000384591 107 ntBASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 MIR559-201ENST00000385188 96 ntBASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 MIR549A-201ENST00000385268 96 ntBASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 RNA5SP213-201ENST00000391031 106 ntBASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 EIF1P2-201ENST00000428233 350 ntBASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 RNU1-131P-201ENST00000458943 161 ntBASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 AC114982.1-201ENST00000469402 321 ntBASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 AC091144.1-201ENST00000519573 138 ntBASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 RRN3P3-201ENST00000549207 578 ntBASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 EIF4BP1-201ENST00000554881 351 ntBASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 AC078899.2-201ENST00000595282 212 ntBASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 AL133255.1-201ENST00000606374 441 ntBASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 AC025754.2-201ENST00000606491 432 ntBASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 SNORD11B-201ENST00000607707 90 ntBASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.11□□□□□ -2.07
LRIF1Q5T3J3 AC243829.7-201ENST00000633081 225 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms