Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.5□□□□□ -1.37
NCBP3Q53F19 AL356387.2-201ENST00000422272 243 ntBASIC6.5□□□□□ -1.37
NCBP3Q53F19 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC6.5□□□□□ -1.37
NCBP3Q53F19 AC093259.1-201ENST00000509755 300 ntBASIC6.5□□□□□ -1.37
NCBP3Q53F19 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC6.5□□□□□ -1.37
NCBP3Q53F19 AC008033.2-201ENST00000542626 177 ntBASIC6.5□□□□□ -1.37
NCBP3Q53F19 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC6.5□□□□□ -1.37
NCBP3Q53F19 PTER-201ENST00000298942 3448 ntTSL 5 BASIC6.5□□□□□ -1.37
NCBP3Q53F19 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.5□□□□□ -1.37
NCBP3Q53F19 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC6.5□□□□□ -1.37
NCBP3Q53F19 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
NCBP3Q53F19 AC006971.1-201ENST00000407916 4486 ntBASIC6.49□□□□□ -1.37
NCBP3Q53F19 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.49□□□□□ -1.37
NCBP3Q53F19 SNORA1B-201ENST00000362535 133 ntBASIC6.49□□□□□ -1.37
NCBP3Q53F19 RNU6-509P-201ENST00000363519 107 ntBASIC6.49□□□□□ -1.37
NCBP3Q53F19 MIR585-201ENST00000384887 94 ntBASIC6.49□□□□□ -1.37
NCBP3Q53F19 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
NCBP3Q53F19 RNA5SP467-201ENST00000391274 118 ntBASIC6.49□□□□□ -1.37
NCBP3Q53F19 SNRPGP14-201ENST00000435400 219 ntBASIC6.49□□□□□ -1.37
NCBP3Q53F19 AC087499.4-201ENST00000448505 178 ntBASIC6.49□□□□□ -1.37
NCBP3Q53F19 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.49□□□□□ -1.37
NCBP3Q53F19 MIR3691-201ENST00000578066 90 ntBASIC6.49□□□□□ -1.37
NCBP3Q53F19 MIR4700-201ENST00000578311 74 ntBASIC6.49□□□□□ -1.37
NCBP3Q53F19 MIR4474-201ENST00000579189 78 ntBASIC6.49□□□□□ -1.37
NCBP3Q53F19 ELOCP29-201ENST00000588193 334 ntBASIC6.49□□□□□ -1.37
NCBP3Q53F19 Mico1.1-201ENST00000611698 204 ntBASIC6.49□□□□□ -1.37
NCBP3Q53F19 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC6.49□□□□□ -1.37
NCBP3Q53F19 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
NCBP3Q53F19 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC6.49□□□□□ -1.37
NCBP3Q53F19 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
NCBP3Q53F19 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NCBP3Q53F19 AC073346.2-201ENST00000624724 2058 ntBASIC6.48□□□□□ -1.37
NCBP3Q53F19 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
NCBP3Q53F19 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NCBP3Q53F19 Y_RNA.316-201ENST00000365118 111 ntBASIC6.48□□□□□ -1.37
NCBP3Q53F19 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.48□□□□□ -1.37
NCBP3Q53F19 AL035398.1-201ENST00000430869 322 ntBASIC6.48□□□□□ -1.37
NCBP3Q53F19 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
NCBP3Q53F19 MAPK10-303ENST00000641324 3959 ntBASIC6.48□□□□□ -1.37
NCBP3Q53F19 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NCBP3Q53F19 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
NCBP3Q53F19 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
NCBP3Q53F19 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NCBP3Q53F19 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NCBP3Q53F19 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
NCBP3Q53F19 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NCBP3Q53F19 Y_RNA.94-201ENST00000363068 106 ntBASIC6.47□□□□□ -1.37
NCBP3Q53F19 SNORD58A-201ENST00000383875 65 ntBASIC6.47□□□□□ -1.37
NCBP3Q53F19 Y_RNA.565-201ENST00000384719 101 ntBASIC6.47□□□□□ -1.37
NCBP3Q53F19 AL627390.1-201ENST00000396055 340 ntBASIC6.47□□□□□ -1.37
NCBP3Q53F19 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC6.47□□□□□ -1.37
NCBP3Q53F19 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.47□□□□□ -1.37
NCBP3Q53F19 AC107083.1-201ENST00000439643 279 ntBASIC6.47□□□□□ -1.37
NCBP3Q53F19 AC140172.1-201ENST00000502928 141 ntBASIC6.47□□□□□ -1.37
NCBP3Q53F19 SNORA31.21-201ENST00000517180 77 ntBASIC6.47□□□□□ -1.37
NCBP3Q53F19 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.47□□□□□ -1.37
NCBP3Q53F19 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
NCBP3Q53F19 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NCBP3Q53F19 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NCBP3Q53F19 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
NCBP3Q53F19 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC6.47□□□□□ -1.37
NCBP3Q53F19 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.37
NCBP3Q53F19 snoU2-30.2-201ENST00000362805 70 ntBASIC6.46□□□□□ -1.38
NCBP3Q53F19 RNU1-32P-201ENST00000363937 159 ntBASIC6.46□□□□□ -1.38
NCBP3Q53F19 snoU2-30.1-201ENST00000365012 70 ntBASIC6.46□□□□□ -1.38
NCBP3Q53F19 AL645927.1-201ENST00000396783 406 ntBASIC6.46□□□□□ -1.38
NCBP3Q53F19 AL645608.4-201ENST00000423619 154 ntBASIC6.46□□□□□ -1.38
NCBP3Q53F19 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC6.46□□□□□ -1.38
NCBP3Q53F19 RN7SL319P-201ENST00000480656 221 ntBASIC6.46□□□□□ -1.38
NCBP3Q53F19 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.46□□□□□ -1.38
NCBP3Q53F19 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.46□□□□□ -1.38
NCBP3Q53F19 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.46□□□□□ -1.38
NCBP3Q53F19 AC091905.4-201ENST00000623432 202 ntBASIC6.46□□□□□ -1.38
NCBP3Q53F19 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
NCBP3Q53F19 MUC2-202ENST00000613187 4845 ntBASIC6.46□□□□□ -1.38
NCBP3Q53F19 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
NCBP3Q53F19 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC6.45□□□□□ -1.38
NCBP3Q53F19 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NCBP3Q53F19 Y_RNA.299-201ENST00000364973 94 ntBASIC6.45□□□□□ -1.38
NCBP3Q53F19 SNORA70.10-201ENST00000384515 134 ntBASIC6.45□□□□□ -1.38
NCBP3Q53F19 U8.15-201ENST00000390947 134 ntBASIC6.45□□□□□ -1.38
NCBP3Q53F19 AC093162.1-201ENST00000419682 124 ntBASIC6.45□□□□□ -1.38
NCBP3Q53F19 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.45□□□□□ -1.38
NCBP3Q53F19 PSMD10P3-201ENST00000437000 448 ntBASIC6.45□□□□□ -1.38
NCBP3Q53F19 RN7SL329P-201ENST00000467740 299 ntBASIC6.45□□□□□ -1.38
NCBP3Q53F19 SNORA31.1-201ENST00000515993 133 ntBASIC6.45□□□□□ -1.38
NCBP3Q53F19 SNORA31.5-201ENST00000516190 133 ntBASIC6.45□□□□□ -1.38
NCBP3Q53F19 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC6.45□□□□□ -1.38
NCBP3Q53F19 MIR3936-201ENST00000584304 110 ntBASIC6.45□□□□□ -1.38
NCBP3Q53F19 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.45□□□□□ -1.38
NCBP3Q53F19 MIR6798-201ENST00000612887 67 ntBASIC6.45□□□□□ -1.38
NCBP3Q53F19 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NCBP3Q53F19 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
NCBP3Q53F19 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
NCBP3Q53F19 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
NCBP3Q53F19 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NCBP3Q53F19 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NCBP3Q53F19 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NCBP3Q53F19 RNU6-1077P-201ENST00000410506 102 ntBASIC6.44□□□□□ -1.38
NCBP3Q53F19 RNU4-69P-201ENST00000410677 143 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms