Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 Y_RNA.91-201ENST00000363042 107 ntBASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 Y_RNA.93-201ENST00000363066 109 ntBASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 Y_RNA.634-201ENST00000364811 113 ntBASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 DYNLT3P1-201ENST00000378574 347 ntBASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 RNU6-1323P-201ENST00000384025 107 ntBASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 RNA5SP127-201ENST00000411051 133 ntBASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 AC004866.1-201ENST00000411748 78 ntBASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 AC002075.2-201ENST00000425207 252 ntBASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 AC017083.1-201ENST00000428093 483 ntBASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 AL590383.1-201ENST00000428602 75 ntBASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 RNU6-893P-201ENST00000458841 100 ntBASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 RNU2-27P-201ENST00000516185 142 ntBASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 RNU6-904P-201ENST00000516206 101 ntBASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 RNU1-117P-201ENST00000517041 158 ntBASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 MED28P6-201ENST00000558776 231 ntBASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.72□□□□□ -1.81
RSPO4Q2I0M5 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC3.71□□□□□ -1.81
RSPO4Q2I0M5 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
RSPO4Q2I0M5 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 RNU6-1125P-201ENST00000363601 107 ntBASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 RNU6-674P-201ENST00000363831 107 ntBASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 RNU6-1276P-201ENST00000365372 104 ntBASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 U3.15-201ENST00000365398 212 ntBASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 AL139281.1-201ENST00000422120 335 ntBASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 HLA-N-201ENST00000437516 135 ntBASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 AC078817.1-201ENST00000492623 435 ntBASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 RPL23AP54-201ENST00000495129 419 ntBASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 AC108145.1-201ENST00000503770 153 ntBASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 SNORD98-201ENST00000636377 67 ntBASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 U2.21-201ENST00000637295 81 ntBASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 CEP170P1-201ENST00000502249 4587 ntBASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 AC058791.1-201ENST00000608412 3198 ntBASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
RSPO4Q2I0M5 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 Y_RNA.107-201ENST00000363190 121 ntBASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 RNY1P1-201ENST00000364372 112 ntBASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 Y_RNA.362-201ENST00000365518 110 ntBASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 RNU6-242P-201ENST00000384359 107 ntBASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 RNU6-140P-201ENST00000384566 108 ntBASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 MIR181B1-201ENST00000385240 110 ntBASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 CBX3P9-201ENST00000402326 552 ntBASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 IGKV3-31-201ENST00000523109 329 ntBASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 AC141557.1-201ENST00000540982 400 ntBASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 MIR3136-201ENST00000583498 78 ntBASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 AC013412.1-201ENST00000610687 192 ntBASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 TCL6_2.1-201ENST00000615162 119 ntBASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 AC007256.1-201ENST00000392253 2765 ntBASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RSPO4Q2I0M5 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 SNORD114-7-201ENST00000362520 77 ntBASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 SNORA80A-201ENST00000363922 136 ntBASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 RNU6-787P-201ENST00000384032 107 ntBASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 MIR153-1-201ENST00000384914 90 ntBASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 AL139095.1-201ENST00000404326 391 ntBASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 CYCSP4-201ENST00000429682 331 ntBASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 AC023141.12-201ENST00000512399 199 ntBASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 RNA5SP236-201ENST00000516169 116 ntBASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 RNA5SP164-201ENST00000516533 110 ntBASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 RNU7-116P-201ENST00000516940 62 ntBASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 AC068339.1-201ENST00000526965 141 ntBASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 AC009163.5-201ENST00000575421 637 ntBASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 MIR3923-201ENST00000579521 83 ntBASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 RNA5SP108-201ENST00000605921 117 ntBASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 AL162274.2-201ENST00000614406 332 ntBASIC3.69□□□□□ -1.82
RSPO4Q2I0M5 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms