Protein–RNA interactions for Protein: Q16799

RTN1, Reticulon-1, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1Q16799 AL391813.1-201ENST00000603098 260 ntBASIC4.04□□□□□ -1.76
RTN1Q16799 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RTN1Q16799 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RTN1Q16799 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RTN1Q16799 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.03□□□□□ -1.76
RTN1Q16799 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RTN1Q16799 SNORA63.4-201ENST00000362763 126 ntBASIC4.03□□□□□ -1.76
RTN1Q16799 RNU6-1325P-201ENST00000364905 105 ntBASIC4.03□□□□□ -1.76
RTN1Q16799 MIR616-201ENST00000385293 97 ntBASIC4.03□□□□□ -1.76
RTN1Q16799 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
RTN1Q16799 SNORD17-201ENST00000390930 237 ntBASIC4.03□□□□□ -1.76
RTN1Q16799 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.03□□□□□ -1.76
RTN1Q16799 AC006461.1-201ENST00000412637 326 ntBASIC4.03□□□□□ -1.76
RTN1Q16799 AL139281.1-201ENST00000422120 335 ntBASIC4.03□□□□□ -1.76
RTN1Q16799 AL121914.1-201ENST00000450188 156 ntBASIC4.03□□□□□ -1.76
RTN1Q16799 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.03□□□□□ -1.76
RTN1Q16799 RNU7-141P-201ENST00000459304 62 ntBASIC4.03□□□□□ -1.76
RTN1Q16799 SCARNA8-201ENST00000515924 131 ntBASIC4.03□□□□□ -1.76
RTN1Q16799 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.03□□□□□ -1.76
RTN1Q16799 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.03□□□□□ -1.76
RTN1Q16799 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.03□□□□□ -1.76
RTN1Q16799 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.03□□□□□ -1.76
RTN1Q16799 AL391261.4-201ENST00000616012 481 ntBASIC4.03□□□□□ -1.76
RTN1Q16799 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
RTN1Q16799 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.03□□□□□ -1.76
RTN1Q16799 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.03□□□□□ -1.77
RTN1Q16799 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RTN1Q16799 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RTN1Q16799 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.02□□□□□ -1.77
RTN1Q16799 RNU4-35P-201ENST00000362588 141 ntBASIC4.02□□□□□ -1.77
RTN1Q16799 Y_RNA.310-201ENST00000365063 113 ntBASIC4.02□□□□□ -1.77
RTN1Q16799 SNORA67.2-201ENST00000384300 149 ntBASIC4.02□□□□□ -1.77
RTN1Q16799 MIR526A2-201ENST00000390198 65 ntBASIC4.02□□□□□ -1.77
RTN1Q16799 SNORA12-201ENST00000391162 147 ntBASIC4.02□□□□□ -1.77
RTN1Q16799 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.02□□□□□ -1.77
RTN1Q16799 RPL23AP62-201ENST00000463396 453 ntBASIC4.02□□□□□ -1.77
RTN1Q16799 SNORA70.19-201ENST00000516717 90 ntBASIC4.02□□□□□ -1.77
RTN1Q16799 RNU6-919P-201ENST00000516731 104 ntBASIC4.02□□□□□ -1.77
RTN1Q16799 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.02□□□□□ -1.77
RTN1Q16799 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.02□□□□□ -1.77
RTN1Q16799 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.02□□□□□ -1.77
RTN1Q16799 AL359881.1-201ENST00000602916 267 ntBASIC4.02□□□□□ -1.77
RTN1Q16799 U3.45-201ENST00000607547 219 ntBASIC4.02□□□□□ -1.77
RTN1Q16799 AL138880.2-201ENST00000616214 239 ntBASIC4.02□□□□□ -1.77
RTN1Q16799 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RTN1Q16799 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RTN1Q16799 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RTN1Q16799 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RTN1Q16799 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.01□□□□□ -1.77
RTN1Q16799 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.01□□□□□ -1.77
RTN1Q16799 AL513302.2-201ENST00000562313 1842 ntBASIC4.01□□□□□ -1.77
RTN1Q16799 Y_RNA.71-201ENST00000362892 104 ntBASIC4.01□□□□□ -1.77
RTN1Q16799 MIR548B-201ENST00000385247 97 ntBASIC4.01□□□□□ -1.77
RTN1Q16799 SNORD37.2-201ENST00000391075 66 ntBASIC4.01□□□□□ -1.77
RTN1Q16799 AC110768.1-201ENST00000509222 400 ntBASIC4.01□□□□□ -1.77
RTN1Q16799 AC025754.2-201ENST00000606491 432 ntBASIC4.01□□□□□ -1.77
RTN1Q16799 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.01□□□□□ -1.77
RTN1Q16799 AL391903.3-201ENST00000612158 163 ntBASIC4.01□□□□□ -1.77
RTN1Q16799 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.01□□□□□ -1.77
RTN1Q16799 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.01□□□□□ -1.77
RTN1Q16799 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
RTN1Q16799 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4□□□□□ -1.77
RTN1Q16799 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RTN1Q16799 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4□□□□□ -1.77
RTN1Q16799 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
RTN1Q16799 RNU6-1298P-201ENST00000362456 101 ntBASIC4□□□□□ -1.77
RTN1Q16799 RNU6-1305P-201ENST00000364353 104 ntBASIC4□□□□□ -1.77
RTN1Q16799 RNA5SP38-201ENST00000410750 119 ntBASIC4□□□□□ -1.77
RTN1Q16799 RNU6-1211P-201ENST00000459179 105 ntBASIC4□□□□□ -1.77
RTN1Q16799 RPL36AP48-201ENST00000485521 314 ntBASIC4□□□□□ -1.77
RTN1Q16799 MIR4644-201ENST00000579929 84 ntBASIC4□□□□□ -1.77
RTN1Q16799 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4□□□□□ -1.77
RTN1Q16799 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
RTN1Q16799 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
RTN1Q16799 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RTN1Q16799 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RTN1Q16799 MIR367-201ENST00000362299 68 ntBASIC3.99□□□□□ -1.77
RTN1Q16799 Y_RNA.127-201ENST00000363386 109 ntBASIC3.99□□□□□ -1.77
RTN1Q16799 Y_RNA.361-201ENST00000365515 120 ntBASIC3.99□□□□□ -1.77
RTN1Q16799 SNORA48.5-201ENST00000391143 135 ntBASIC3.99□□□□□ -1.77
RTN1Q16799 RNU2-52P-201ENST00000410680 190 ntBASIC3.99□□□□□ -1.77
RTN1Q16799 AC010154.1-201ENST00000425857 269 ntBASIC3.99□□□□□ -1.77
RTN1Q16799 Y_RNA.686-201ENST00000516548 134 ntBASIC3.99□□□□□ -1.77
RTN1Q16799 AC112693.2-201ENST00000556538 232 ntBASIC3.99□□□□□ -1.77
RTN1Q16799 MIR4724-201ENST00000579485 89 ntBASIC3.99□□□□□ -1.77
RTN1Q16799 MIR1254-2-201ENST00000579553 63 ntBASIC3.99□□□□□ -1.77
RTN1Q16799 AL670379.2-201ENST00000604983 252 ntBASIC3.99□□□□□ -1.77
RTN1Q16799 AC099778.2-201ENST00000610904 211 ntBASIC3.99□□□□□ -1.77
RTN1Q16799 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.99□□□□□ -1.77
RTN1Q16799 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.99□□□□□ -1.77
RTN1Q16799 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.99□□□□□ -1.77
RTN1Q16799 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.99□□□□□ -1.77
RTN1Q16799 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.98□□□□□ -1.77
RTN1Q16799 AC002546.1-201ENST00000588041 2504 ntBASIC3.98□□□□□ -1.77
RTN1Q16799 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RTN1Q16799 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.98□□□□□ -1.77
RTN1Q16799 Y_RNA.273-201ENST00000364703 102 ntBASIC3.98□□□□□ -1.77
RTN1Q16799 MIR539-201ENST00000365690 78 ntBASIC3.98□□□□□ -1.77
RTN1Q16799 Y_RNA.420-201ENST00000384043 110 ntBASIC3.98□□□□□ -1.77
RTN1Q16799 MIR449B-201ENST00000384995 97 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms