Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS72Q15906 AC104581.2-201ENST00000572227 430 ntBASIC3.35□□□□□ -1.87
VPS72Q15906 AC060766.3-201ENST00000591442 263 ntBASIC3.35□□□□□ -1.87
VPS72Q15906 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS72Q15906 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS72Q15906 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS72Q15906 AC009541.1-201ENST00000438279 2662 ntBASIC3.34□□□□□ -1.87
VPS72Q15906 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS72Q15906 Y_RNA.105-201ENST00000363182 111 ntBASIC3.34□□□□□ -1.87
VPS72Q15906 RNU6-611P-201ENST00000384276 104 ntBASIC3.34□□□□□ -1.87
VPS72Q15906 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS72Q15906 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS72Q15906 AC124916.1-201ENST00000444020 547 ntBASIC3.34□□□□□ -1.87
VPS72Q15906 LINC01399-202ENST00000458450 244 ntBASIC3.34□□□□□ -1.87
VPS72Q15906 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS72Q15906 RNU7-175P-201ENST00000515915 61 ntBASIC3.34□□□□□ -1.87
VPS72Q15906 Y_RNA.706-201ENST00000516933 99 ntBASIC3.34□□□□□ -1.87
VPS72Q15906 RNU6-570P-201ENST00000517051 105 ntBASIC3.34□□□□□ -1.87
VPS72Q15906 SCARNA3-201ENST00000517097 143 ntBASIC3.34□□□□□ -1.87
VPS72Q15906 AC091144.1-201ENST00000519573 138 ntBASIC3.34□□□□□ -1.87
VPS72Q15906 AP003733.2-201ENST00000529409 171 ntBASIC3.34□□□□□ -1.87
VPS72Q15906 AL356280.1-201ENST00000603614 379 ntBASIC3.34□□□□□ -1.87
VPS72Q15906 U6.104-201ENST00000637979 90 ntBASIC3.34□□□□□ -1.87
VPS72Q15906 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS72Q15906 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
VPS72Q15906 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS72Q15906 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS72Q15906 Y_RNA.14-201ENST00000362415 103 ntBASIC3.33□□□□□ -1.88
VPS72Q15906 Y_RNA.27-201ENST00000362540 103 ntBASIC3.33□□□□□ -1.88
VPS72Q15906 RNU6-942P-201ENST00000363002 107 ntBASIC3.33□□□□□ -1.88
VPS72Q15906 Y_RNA.183-201ENST00000363882 113 ntBASIC3.33□□□□□ -1.88
VPS72Q15906 U3.13-201ENST00000364804 214 ntBASIC3.33□□□□□ -1.88
VPS72Q15906 RNU6-1026P-201ENST00000384465 108 ntBASIC3.33□□□□□ -1.88
VPS72Q15906 SNORD116-20-201ENST00000384529 92 ntBASIC3.33□□□□□ -1.88
VPS72Q15906 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS72Q15906 Z82188.1-201ENST00000436709 154 ntBASIC3.33□□□□□ -1.88
VPS72Q15906 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS72Q15906 RPS27P29-201ENST00000463110 252 ntBASIC3.33□□□□□ -1.88
VPS72Q15906 AC112771.1-201ENST00000463581 102 ntBASIC3.33□□□□□ -1.88
VPS72Q15906 RNA5SP281-201ENST00000516504 135 ntBASIC3.33□□□□□ -1.88
VPS72Q15906 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS72Q15906 MRPS36P4-201ENST00000534436 298 ntBASIC3.33□□□□□ -1.88
VPS72Q15906 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.33□□□□□ -1.88
VPS72Q15906 MIR3128-201ENST00000581957 66 ntBASIC3.33□□□□□ -1.88
VPS72Q15906 AC090616.3-201ENST00000582184 217 ntBASIC3.33□□□□□ -1.88
VPS72Q15906 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VPS72Q15906 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS72Q15906 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS72Q15906 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
VPS72Q15906 AC092881.1-201ENST00000638218 2733 ntBASIC3.32□□□□□ -1.88
VPS72Q15906 Y_RNA.458-201ENST00000384240 102 ntBASIC3.32□□□□□ -1.88
VPS72Q15906 Y_RNA.552-201ENST00000384665 112 ntBASIC3.32□□□□□ -1.88
VPS72Q15906 RNU6-121P-201ENST00000410525 99 ntBASIC3.32□□□□□ -1.88
VPS72Q15906 AC097463.2-201ENST00000421074 142 ntBASIC3.32□□□□□ -1.88
VPS72Q15906 AL590556.1-201ENST00000423231 483 ntBASIC3.32□□□□□ -1.88
VPS72Q15906 AL591043.1-201ENST00000432461 424 ntBASIC3.32□□□□□ -1.88
VPS72Q15906 TOMM22P6-201ENST00000465035 409 ntBASIC3.32□□□□□ -1.88
VPS72Q15906 AC107032.1-201ENST00000485945 480 ntBASIC3.32□□□□□ -1.88
VPS72Q15906 AC010469.2-201ENST00000496412 480 ntBASIC3.32□□□□□ -1.88
VPS72Q15906 MTND1P19-201ENST00000511780 315 ntBASIC3.32□□□□□ -1.88
VPS72Q15906 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.32□□□□□ -1.88
VPS72Q15906 RNU5B-3P-201ENST00000516601 115 ntBASIC3.32□□□□□ -1.88
VPS72Q15906 RPPH1-2P-201ENST00000516688 293 ntBASIC3.32□□□□□ -1.88
VPS72Q15906 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS72Q15906 AL442163.3-201ENST00000554110 156 ntBASIC3.32□□□□□ -1.88
VPS72Q15906 RNU6-91P-201ENST00000607774 107 ntBASIC3.32□□□□□ -1.88
VPS72Q15906 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS72Q15906 AC233981.2-201ENST00000611524 1614 ntBASIC3.32□□□□□ -1.88
VPS72Q15906 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS72Q15906 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS72Q15906 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS72Q15906 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
VPS72Q15906 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.31□□□□□ -1.88
VPS72Q15906 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS72Q15906 MTND5P6-201ENST00000422338 1798 ntBASIC3.31□□□□□ -1.88
VPS72Q15906 Y_RNA.477-201ENST00000384352 108 ntBASIC3.31□□□□□ -1.88
VPS72Q15906 MIR181A2-201ENST00000384863 110 ntBASIC3.31□□□□□ -1.88
VPS72Q15906 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
VPS72Q15906 RNU6-1328P-201ENST00000410938 106 ntBASIC3.31□□□□□ -1.88
VPS72Q15906 RPL21P38-201ENST00000418090 167 ntBASIC3.31□□□□□ -1.88
VPS72Q15906 AL358453.1-201ENST00000422522 250 ntBASIC3.31□□□□□ -1.88
VPS72Q15906 U8.22-201ENST00000459141 133 ntBASIC3.31□□□□□ -1.88
VPS72Q15906 AC146507.2-201ENST00000460608 476 ntBASIC3.31□□□□□ -1.88
VPS72Q15906 TRBVB-201ENST00000477100 408 ntBASIC3.31□□□□□ -1.88
VPS72Q15906 AC098869.1-201ENST00000481627 292 ntBASIC3.31□□□□□ -1.88
VPS72Q15906 AC067942.3-201ENST00000512025 362 ntBASIC3.31□□□□□ -1.88
VPS72Q15906 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS72Q15906 AC103810.6-201ENST00000606708 136 ntBASIC3.31□□□□□ -1.88
VPS72Q15906 AC069294.1-201ENST00000608397 350 ntBASIC3.31□□□□□ -1.88
VPS72Q15906 AL449363.1-201ENST00000617815 186 ntBASIC3.31□□□□□ -1.88
VPS72Q15906 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS72Q15906 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
VPS72Q15906 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.31□□□□□ -1.88
VPS72Q15906 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
VPS72Q15906 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.3□□□□□ -1.88
VPS72Q15906 Y_RNA.60-201ENST00000362831 98 ntBASIC3.3□□□□□ -1.88
VPS72Q15906 RNU6-1159P-201ENST00000362933 107 ntBASIC3.3□□□□□ -1.88
VPS72Q15906 SNORD114-19-201ENST00000363072 75 ntBASIC3.3□□□□□ -1.88
VPS72Q15906 RNU4-9P-201ENST00000364951 139 ntBASIC3.3□□□□□ -1.88
VPS72Q15906 RNU6-968P-201ENST00000384076 107 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms